RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 NPM1P06748 294 aaKnown RBP eCLIP39.69■■■■□ 3.94
CDKN3-207ENST00000543789 KIF27Q86VH2 1401 aa39.67■■■■□ 3.94
CDKN3-207ENST00000543789 RUSC2Q8N2Y8 1516 aa39.67■■■■□ 3.94
CDKN3-207ENST00000543789 KIAA0586Q9BVV6 1533 aa39.6■■■■□ 3.93
CDKN3-207ENST00000543789 FAM69CQ0P6D2 419 aa39.58■■■■□ 3.93
CDKN3-207ENST00000543789 ABCC10Q5T3U5 1492 aa39.49■■■■□ 3.91
CDKN3-207ENST00000543789 KIF13AQ9H1H9 1805 aa39.46■■■■□ 3.91
CDKN3-207ENST00000543789 CARMIL1Q5VZK9 1371 aa39.46■■■■□ 3.91
CDKN3-207ENST00000543789 CUL7Q14999 1698 aa39.45■■■■□ 3.91
CDKN3-207ENST00000543789 MAPKBP1O60336 1514 aa39.42■■■■□ 3.9
CDKN3-207ENST00000543789 ADCY10Q96PN6 1610 aa39.38■■■■□ 3.89
CDKN3-207ENST00000543789 PTPRGP23470 1445 aa39.35■■■■□ 3.89
CDKN3-207ENST00000543789 TTBK1Q5TCY1 1321 aaPredicted RBP39.3■■■■□ 3.88
CDKN3-207ENST00000543789 DIP2BQ9P265 1576 aa39.26■■■■□ 3.88
CDKN3-207ENST00000543789 CARMIL2Q6F5E8 1435 aa39.25■■■■□ 3.87
CDKN3-207ENST00000543789 TNIKQ9UKE5 1360 aa39.24■■■■□ 3.87
CDKN3-207ENST00000543789 IQGAP2Q13576 1575 aa39.09■■■■□ 3.85
CDKN3-207ENST00000543789 ABCC2Q92887 1545 aa39.09■■■■□ 3.85
CDKN3-207ENST00000543789 RAPGEF2Q9Y4G8 1499 aa39.01■■■■□ 3.84
CDKN3-207ENST00000543789 ASXL2Q76L83 1435 aa39■■■■□ 3.83
CDKN3-207ENST00000543789 UACAQ9BZF9 1416 aa39■■■■□ 3.83
CDKN3-207ENST00000543789 KDM6BO15054 1643 aa39■■■■□ 3.83
CDKN3-207ENST00000543789 UHRF1BP1LA0JNW5 1464 aa38.99■■■■□ 3.83
CDKN3-207ENST00000543789 DISP1Q96F81 1524 aa38.99■■■■□ 3.83
CDKN3-207ENST00000543789 PLB1Q6P1J6 1458 aa38.98■■■■□ 3.83
CDKN3-207ENST00000543789 TSPOAP1O95153 1857 aa38.92■■■■□ 3.82
CDKN3-207ENST00000543789 KDM4FA0A1W2PPD8 638 aa38.9■■■■□ 3.82
CDKN3-207ENST00000543789 UGGT2Q9NYU1 1516 aa38.89■■■■□ 3.82
CDKN3-207ENST00000543789 GLI2P10070 1586 aa38.84■■■■□ 3.81
CDKN3-207ENST00000543789 KDM5BQ9UGL1 1544 aa38.81■■■■□ 3.8
CDKN3-207ENST00000543789 EPRSP07814 1512 aaKnown RBP38.73■■■■□ 3.79
CDKN3-207ENST00000543789 KIAA0556O60303 1618 aa38.72■■■■□ 3.79
CDKN3-207ENST00000543789 PPRC1Q5VV67 1664 aaKnown RBP38.65■■■■□ 3.78
CDKN3-207ENST00000543789 ZCCHC11Q5TAX3 1644 aaKnown RBP38.61■■■■□ 3.77
CDKN3-207ENST00000543789 COL17A1Q9UMD9 1497 aaPredicted RBP38.6■■■■□ 3.77
CDKN3-207ENST00000543789 GOLGA3Q08378 1498 aa38.6■■■■□ 3.77
CDKN3-207ENST00000543789 TEX14Q8IWB6 1497 aa38.59■■■■□ 3.77
CDKN3-207ENST00000543789 WDR7Q9Y4E6 1490 aa38.55■■■■□ 3.76
CDKN3-207ENST00000543789 MAP3K4Q9Y6R4 1608 aa38.55■■■■□ 3.76
CDKN3-207ENST00000543789 PRXQ9BXM0 1461 aa38.54■■■■□ 3.76
CDKN3-207ENST00000543789 KCNH8Q96L42 1107 aa38.49■■■■□ 3.75
CDKN3-207ENST00000543789 CTTNBP2Q8WZ74 1663 aa38.46■■■■□ 3.75
CDKN3-207ENST00000543789 FAM9AQ8IZU1 332 aaPredicted RBP38.44■■■■□ 3.74
CDKN3-207ENST00000543789 ABCA8O94911 1581 aa38.42■■■■□ 3.74
CDKN3-207ENST00000543789 ADGRL1O94910 1474 aa38.41■■■■□ 3.74
CDKN3-207ENST00000543789 CD109Q6YHK3 1445 aa38.41■■■■□ 3.74
CDKN3-207ENST00000543789 P3H3Q8IVL6 736 aa38.35■■■■□ 3.73
CDKN3-207ENST00000543789 MAGI3Q5TCQ9 1506 aa38.33■■■■□ 3.73
CDKN3-207ENST00000543789 CSRNP3Q8WYN3 585 aa38.31■■■■□ 3.72
CDKN3-207ENST00000543789 ARID3CA6NKF2 412 aa38.28■■■■□ 3.72
CDKN3-207ENST00000543789 CFAP43Q8NDM7 1665 aa38.2■■■■□ 3.71
CDKN3-207ENST00000543789 ATP10BO94823 1461 aa38.2■■■■□ 3.71
CDKN3-207ENST00000543789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.06■■■■□ 3.68
CDKN3-207ENST00000543789 HNRNPUL2Q1KMD3 747 aaKnown RBP38.06■■■■□ 3.68
CDKN3-207ENST00000543789 ARAP3Q8WWN8 1544 aa38.04■■■■□ 3.68
CDKN3-207ENST00000543789 RANGAP1P46060 587 aaPredicted RBP38.02■■■■□ 3.68
CDKN3-207ENST00000543789 PHLDB1Q86UU1 1377 aa38.02■■■■□ 3.68
CDKN3-207ENST00000543789 SAMD9Q5K651 1589 aa38.01■■■■□ 3.67
CDKN3-207ENST00000543789 EEA1Q15075 1411 aa38■■■■□ 3.67
CDKN3-207ENST00000543789 ILDR1Q86SU0 546 aaPredicted RBP37.94■■■■□ 3.66
CDKN3-207ENST00000543789 RAPGEF6Q8TEU7 1601 aa37.92■■■■□ 3.66
CDKN3-207ENST00000543789 RAPGEF3O95398 923 aa37.92■■■■□ 3.66
CDKN3-207ENST00000543789 ABCA9Q8IUA7 1624 aa37.91■■■■□ 3.66
CDKN3-207ENST00000543789 HECW2Q9P2P5 1572 aa37.9■■■■□ 3.66
CDKN3-207ENST00000543789 NUP153P49790 1475 aaKnown RBP37.88■■■■□ 3.65
CDKN3-207ENST00000543789 FHOD3Q2V2M9 1422 aa37.87■■■■□ 3.65
CDKN3-207ENST00000543789 NEO1Q92859 1461 aa37.85■■■■□ 3.65
CDKN3-207ENST00000543789 PLEKHD1A6NEE1 506 aa37.85■■■■□ 3.65
CDKN3-207ENST00000543789 KIF21BO75037 1637 aa37.81■■■■□ 3.64
CDKN3-207ENST00000543789 ARID4BQ4LE39 1312 aaPredicted RBP37.68■■■■□ 3.62
CDKN3-207ENST00000543789 EFCAB5A4FU69 1503 aa37.64■■■■□ 3.62
CDKN3-207ENST00000543789 PTPRMP28827 1452 aa37.63■■■■□ 3.61
CDKN3-207ENST00000543789 AKNAQ7Z591 1439 aa37.61■■■■□ 3.61
CDKN3-207ENST00000543789 DENND4BO75064 1496 aaPredicted RBP37.61■■■■□ 3.61
CDKN3-207ENST00000543789 FRMPD1Q5SYB0 1578 aa37.59■■■■□ 3.61
CDKN3-207ENST00000543789 ADAMTSL3P82987 1691 aa37.57■■■■□ 3.61
CDKN3-207ENST00000543789 UBTFP17480 764 aaKnown RBP37.57■■■■□ 3.6
CDKN3-207ENST00000543789 FANCAO15360 1455 aa37.57■■■■□ 3.6
CDKN3-207ENST00000543789 EHMT2Q96KQ7 1210 aa37.55■■■■□ 3.6
CDKN3-207ENST00000543789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.55■■■■□ 3.6
CDKN3-207ENST00000543789 ATP1B4Q9UN42 357 aaPredicted RBP37.49■■■■□ 3.59
CDKN3-207ENST00000543789 CDK13Q14004 1512 aaKnown RBP37.46■■■■□ 3.59
CDKN3-207ENST00000543789 BCORL1Q5H9F3 1711 aa37.45■■■■□ 3.59
CDKN3-207ENST00000543789 CFAP74Q9C0B2 1584 aa37.42■■■■□ 3.58
CDKN3-207ENST00000543789 ARHGEF40Q8TER5 1519 aa37.42■■■■□ 3.58
CDKN3-207ENST00000543789 TTC37Q6PGP7 1564 aa37.42■■■■□ 3.58
CDKN3-207ENST00000543789 FMN1Q68DA7 1419 aa37.41■■■■□ 3.58
CDKN3-207ENST00000543789 PLCH2O75038 1416 aa37.4■■■■□ 3.58
CDKN3-207ENST00000543789 CDK11AQ9UQ88 783 aaPredicted RBP37.39■■■■□ 3.58
CDKN3-207ENST00000543789 RICTORQ6R327 1708 aa37.39■■■■□ 3.58
CDKN3-207ENST00000543789 CHIC1Q5VXU3 224 aa37.38■■■■□ 3.57
CDKN3-207ENST00000543789 MADDQ8WXG6 1647 aa37.38■■■■□ 3.57
CDKN3-207ENST00000543789 POGZQ7Z3K3 1410 aa37.36■■■■□ 3.57
CDKN3-207ENST00000543789 SCAPERQ9BY12 1400 aa37.36■■■■□ 3.57
CDKN3-207ENST00000543789 YEATS2Q9ULM3 1422 aa37.35■■■■□ 3.57
CDKN3-207ENST00000543789 MAGI2Q86UL8 1455 aa37.34■■■■□ 3.57
CDKN3-207ENST00000543789 EFCAB2Q5VUJ9 269 aa37.34■■■■□ 3.57
CDKN3-207ENST00000543789 ZMYM4Q5VZL5 1548 aa37.33■■■■□ 3.57
CDKN3-207ENST00000543789 ARHGAP35Q9NRY4 1499 aa37.33■■■■□ 3.57
CDKN3-207ENST00000543789 ZFYVE16Q7Z3T8 1539 aa37.31■■■■□ 3.56
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