RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
KDM3A-216ENST00000542128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.88■□□□□ 0.295e-7■■□□□ 12.9
KDM3A-216ENST00000542128 TSPY4P0CV99 314 aa16.87■□□□□ 0.29
KDM3A-216ENST00000542128 TSPY10P0CW01 314 aa16.87■□□□□ 0.29
KDM3A-216ENST00000542128 PLEKHD1A6NEE1 506 aa16.86■□□□□ 0.29
KDM3A-216ENST00000542128 ARID4BQ4LE39 1312 aaPredicted RBP16.86■□□□□ 0.29
KDM3A-216ENST00000542128 CHIC2Q9UKJ5 165 aa16.83■□□□□ 0.28
KDM3A-216ENST00000542128 SALL2Q9Y467 1007 aaPredicted RBP16.83■□□□□ 0.28
KDM3A-216ENST00000542128 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
KDM3A-216ENST00000542128 SMARCA2P51531 1590 aa16.78■□□□□ 0.28
KDM3A-216ENST00000542128 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
KDM3A-216ENST00000542128 PDS5BQ9NTI5 1447 aa16.78■□□□□ 0.28
KDM3A-216ENST00000542128 PKNOX2Q96KN3 472 aa16.77■□□□□ 0.28
KDM3A-216ENST00000542128 LAS1LQ9Y4W2 734 aaKnown RBP16.77■□□□□ 0.27
KDM3A-216ENST00000542128 PPM1GO15355 546 aaPredicted RBP16.75■□□□□ 0.27
KDM3A-216ENST00000542128 NAP1L5Q96NT1 182 aaPredicted RBP16.74■□□□□ 0.27
KDM3A-216ENST00000542128 ARXQ96QS3 562 aa16.73■□□□□ 0.27
KDM3A-216ENST00000542128 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
KDM3A-216ENST00000542128 VSIG10Q8N0Z9 540 aa16.72■□□□□ 0.27
KDM3A-216ENST00000542128 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
KDM3A-216ENST00000542128 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
KDM3A-216ENST00000542128 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
KDM3A-216ENST00000542128 PPP4R2Q9NY27 417 aa16.69■□□□□ 0.26
KDM3A-216ENST00000542128 CCDC88BA6NC98 1476 aa16.68■□□□□ 0.26
KDM3A-216ENST00000542128 FANCIQ9NVI1 1328 aa16.68■□□□□ 0.26
KDM3A-216ENST00000542128 WIZO95785 1651 aa16.65■□□□□ 0.26
KDM3A-216ENST00000542128 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.25
KDM3A-216ENST00000542128 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
KDM3A-216ENST00000542128 FAM9BQ8IZU0 186 aa16.62■□□□□ 0.25
KDM3A-216ENST00000542128 B4GALNT3Q6L9W6 998 aa16.62■□□□□ 0.25
KDM3A-216ENST00000542128 UBE2Q2Q8WVN8 375 aa16.61■□□□□ 0.25
KDM3A-216ENST00000542128 CADPSQ9ULU8 1353 aa16.61■□□□□ 0.25
KDM3A-216ENST00000542128 CFDP1Q9UEE9 299 aaPredicted RBP16.61■□□□□ 0.25
KDM3A-216ENST00000542128 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
KDM3A-216ENST00000542128 C14orf37Q86TY3 774 aa16.6■□□□□ 0.25
KDM3A-216ENST00000542128 TIMELESSQ9UNS1 1208 aa16.6■□□□□ 0.25
KDM3A-216ENST00000542128 RSPH6AQ9H0K4 717 aa16.59■□□□□ 0.25
KDM3A-216ENST00000542128 SMARCA4P51532 1647 aa16.58■□□□□ 0.25
KDM3A-216ENST00000542128 CUX2O14529 1486 aa16.58■□□□□ 0.24
KDM3A-216ENST00000542128 CLIP1P30622 1438 aa16.58■□□□□ 0.24
KDM3A-216ENST00000542128 DDRGK1Q96HY6 314 aa16.58■□□□□ 0.24
KDM3A-216ENST00000542128 MLECQ14165 292 aa16.57■□□□□ 0.24
KDM3A-216ENST00000542128 IL27Q8NEV9 243 aa16.56■□□□□ 0.24
KDM3A-216ENST00000542128 HSP90AA1P07900 732 aaKnown RBP16.56■□□□□ 0.24
KDM3A-216ENST00000542128 ANP32BQ92688 251 aaKnown RBP16.56■□□□□ 0.24
KDM3A-216ENST00000542128 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
KDM3A-216ENST00000542128 CYB5RLQ6IPT4 315 aa16.54■□□□□ 0.24
KDM3A-216ENST00000542128 RRP7BPQ9NSQ0 103 aa16.54■□□□□ 0.24
KDM3A-216ENST00000542128 SOGA1O94964 1423 aa16.53■□□□□ 0.24
KDM3A-216ENST00000542128 EIF4G1Q04637 1599 aaKnown RBP16.53■□□□□ 0.24
KDM3A-216ENST00000542128 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
KDM3A-216ENST00000542128 HIRIP3Q9BW71 556 aaPredicted RBP16.52■□□□□ 0.23
KDM3A-216ENST00000542128 KDM2AQ9Y2K7 1162 aa16.52■□□□□ 0.23
KDM3A-216ENST00000542128 DNAJC5BQ9UF47 199 aa16.51■□□□□ 0.23
KDM3A-216ENST00000542128 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
KDM3A-216ENST00000542128 TNNT2P45379 298 aaPredicted RBP16.51■□□□□ 0.23
KDM3A-216ENST00000542128 HSP90AA2PQ14568 343 aaPredicted RBP16.5■□□□□ 0.23
KDM3A-216ENST00000542128 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
KDM3A-216ENST00000542128 OSCARQ8IYS5 282 aa16.49■□□□□ 0.23
KDM3A-216ENST00000542128 EEA1Q15075 1411 aa16.49■□□□□ 0.23
KDM3A-216ENST00000542128 TRIM44Q96DX7 344 aaPredicted RBP16.48■□□□□ 0.23
KDM3A-216ENST00000542128 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
KDM3A-216ENST00000542128 A0A0U1RQG5 324 aaPredicted RBP16.44■□□□□ 0.22
KDM3A-216ENST00000542128 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
KDM3A-216ENST00000542128 MRS2Q9HD23 443 aa16.44■□□□□ 0.22
KDM3A-216ENST00000542128 TONSLQ96HA7 1378 aa16.43■□□□□ 0.22
KDM3A-216ENST00000542128 A0A0G2JS52 829 aa16.43■□□□□ 0.22
KDM3A-216ENST00000542128 MSH5O43196 834 aa16.42■□□□□ 0.22
KDM3A-216ENST00000542128 USP35Q9P2H5 1018 aa16.42■□□□□ 0.22
KDM3A-216ENST00000542128 RGL3Q3MIN7 710 aa16.41■□□□□ 0.22
KDM3A-216ENST00000542128 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
KDM3A-216ENST00000542128 CARMIL2Q6F5E8 1435 aa16.4■□□□□ 0.22
KDM3A-216ENST00000542128 NCAPD3P42695 1498 aa16.4■□□□□ 0.22
KDM3A-216ENST00000542128 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
KDM3A-216ENST00000542128 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
KDM3A-216ENST00000542128 JPH4Q96JJ6 628 aa16.37■□□□□ 0.21
KDM3A-216ENST00000542128 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
KDM3A-216ENST00000542128 CCER2I3L3R5 266 aa16.35■□□□□ 0.21
KDM3A-216ENST00000542128 ZBTB7CA1YPR0 619 aa16.35■□□□□ 0.21
KDM3A-216ENST00000542128 GGT6Q6P531 493 aa16.35■□□□□ 0.21
KDM3A-216ENST00000542128 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
KDM3A-216ENST00000542128 GSE1Q14687 1217 aa16.34■□□□□ 0.21
KDM3A-216ENST00000542128 UPF2Q9HAU5 1272 aaKnown RBP16.34■□□□□ 0.21
KDM3A-216ENST00000542128 L1TD1Q5T7N2 865 aaKnown RBP16.33■□□□□ 0.21
KDM3A-216ENST00000542128 NCLP19338 710 aaKnown RBP16.33■□□□□ 0.2
KDM3A-216ENST00000542128 CDK11BP21127 795 aaKnown RBP16.32■□□□□ 0.2
KDM3A-216ENST00000542128 CCNB3Q8WWL7 1395 aa16.31■□□□□ 0.2
KDM3A-216ENST00000542128 BICRAQ9NZM4 1560 aa16.3■□□□□ 0.2
KDM3A-216ENST00000542128 CEP162Q5TB80 1403 aa16.3■□□□□ 0.2
KDM3A-216ENST00000542128 LMOD2Q6P5Q4 547 aa16.28■□□□□ 0.2
KDM3A-216ENST00000542128 BRPF3Q9ULD4 1205 aa16.28■□□□□ 0.2
KDM3A-216ENST00000542128 BECN1Q14457 450 aa16.28■□□□□ 0.2
KDM3A-216ENST00000542128 EFCAB2Q5VUJ9 269 aa16.27■□□□□ 0.19
KDM3A-216ENST00000542128 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
KDM3A-216ENST00000542128 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
KDM3A-216ENST00000542128 NESP48681 1621 aa16.24■□□□□ 0.19
KDM3A-216ENST00000542128 TNIKQ9UKE5 1360 aa16.22■□□□□ 0.19
KDM3A-216ENST00000542128 TMC1Q8TDI8 760 aa16.22■□□□□ 0.19
KDM3A-216ENST00000542128 AEBP2Q6ZN18 517 aaPredicted RBP16.21■□□□□ 0.19
KDM3A-216ENST00000542128 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms