RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 CCNB3Q8WWL7 1395 aa19.7■□□□□ 0.74
PRKAB1-206ENST00000541640 FHAD1B1AJZ9 1412 aa19.69■□□□□ 0.74
PRKAB1-206ENST00000541640 DHX57Q6P158 1386 aaKnown RBP19.69■□□□□ 0.74
PRKAB1-206ENST00000541640 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
PRKAB1-206ENST00000541640 CFAP43Q8NDM7 1665 aa19.67■□□□□ 0.74
PRKAB1-206ENST00000541640 CTTNBP2Q8WZ74 1663 aa19.66■□□□□ 0.74
PRKAB1-206ENST00000541640 EFCAB5A4FU69 1503 aa19.66■□□□□ 0.74
PRKAB1-206ENST00000541640 LRRC9Q6ZRR7 1453 aa19.64■□□□□ 0.74
PRKAB1-206ENST00000541640 PCF11O94913 1555 aaKnown RBP19.64■□□□□ 0.73
PRKAB1-206ENST00000541640 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
PRKAB1-206ENST00000541640 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
PRKAB1-206ENST00000541640 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.723e-7■■■■■ 30.3
PRKAB1-206ENST00000541640 FYCO1Q9BQS8 1478 aa19.57■□□□□ 0.72
PRKAB1-206ENST00000541640 WDR62O43379 1518 aa19.57■□□□□ 0.72
PRKAB1-206ENST00000541640 THOC2Q8NI27 1593 aaKnown RBP19.56■□□□□ 0.72
PRKAB1-206ENST00000541640 ACIN1Q9UKV3 1341 aaKnown RBP19.56■□□□□ 0.72
PRKAB1-206ENST00000541640 FHOD3Q2V2M9 1422 aa19.55■□□□□ 0.72
PRKAB1-206ENST00000541640 CASKIN1Q8WXD9 1431 aa19.54■□□□□ 0.72
PRKAB1-206ENST00000541640 PHLDB1Q86UU1 1377 aa19.52■□□□□ 0.72
PRKAB1-206ENST00000541640 GAPVD1Q14C86 1478 aa19.52■□□□□ 0.71
PRKAB1-206ENST00000541640 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
PRKAB1-206ENST00000541640 CENPBP07199 599 aaPredicted RBP19.5■□□□□ 0.71
PRKAB1-206ENST00000541640 NEUROD1Q13562 356 aa19.5■□□□□ 0.71
PRKAB1-206ENST00000541640 SAMD9Q5K651 1589 aa19.49■□□□□ 0.71
PRKAB1-206ENST00000541640 FMN1Q68DA7 1419 aa19.48■□□□□ 0.71
PRKAB1-206ENST00000541640 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
PRKAB1-206ENST00000541640 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
PRKAB1-206ENST00000541640 RAB3GAP2Q9H2M9 1393 aa19.47■□□□□ 0.71
PRKAB1-206ENST00000541640 ITGAEP38570 1179 aa19.45■□□□□ 0.7
PRKAB1-206ENST00000541640 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
PRKAB1-206ENST00000541640 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
PRKAB1-206ENST00000541640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.42■□□□□ 0.7
PRKAB1-206ENST00000541640 MAPKBP1O60336 1514 aa19.41■□□□□ 0.7
PRKAB1-206ENST00000541640 IFT140Q96RY7 1462 aa19.4■□□□□ 0.7
PRKAB1-206ENST00000541640 MIER1Q8N108 512 aa19.4■□□□□ 0.7
PRKAB1-206ENST00000541640 ATP1B4Q9UN42 357 aaPredicted RBP19.4■□□□□ 0.7
PRKAB1-206ENST00000541640 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
PRKAB1-206ENST00000541640 LRRIQ1Q96JM4 1722 aa19.37■□□□□ 0.69
PRKAB1-206ENST00000541640 FAM50AQ14320 339 aaKnown RBP19.36■□□□□ 0.69
PRKAB1-206ENST00000541640 GRIN2BQ13224 1484 aa19.35■□□□□ 0.69
PRKAB1-206ENST00000541640 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
PRKAB1-206ENST00000541640 ZNF608Q9ULD9 1512 aaPredicted RBP19.33■□□□□ 0.68
PRKAB1-206ENST00000541640 FGD6Q6ZV73 1430 aa19.32■□□□□ 0.68
PRKAB1-206ENST00000541640 ADAMTS12P58397 1594 aa19.29■□□□□ 0.68
PRKAB1-206ENST00000541640 MTUS2Q5JR59 1369 aa19.29■□□□□ 0.68
PRKAB1-206ENST00000541640 EHBP1L1Q8N3D4 1523 aa19.27■□□□□ 0.67
PRKAB1-206ENST00000541640 SUPT6HQ7KZ85 1726 aaKnown RBP19.27■□□□□ 0.67
PRKAB1-206ENST00000541640 GTF3C3Q9Y5Q9 886 aa19.26■□□□□ 0.67
PRKAB1-206ENST00000541640 EIF4G3O43432 1585 aaKnown RBP19.25■□□□□ 0.67
PRKAB1-206ENST00000541640 IQGAP2Q13576 1575 aa19.25■□□□□ 0.67
PRKAB1-206ENST00000541640 NCOA2Q15596 1464 aa19.24■□□□□ 0.67
PRKAB1-206ENST00000541640 CCDC18Q5T9S5 1454 aa19.23■□□□□ 0.67
PRKAB1-206ENST00000541640 MYOM3Q5VTT5 1437 aa19.22■□□□□ 0.67
PRKAB1-206ENST00000541640 YTHDC1Q96MU7 727 aaKnown RBP19.22■□□□□ 0.67
PRKAB1-206ENST00000541640 HECW1Q76N89 1606 aa19.21■□□□□ 0.67
PRKAB1-206ENST00000541640 ARHGEF11O15085 1522 aa19.21■□□□□ 0.67
PRKAB1-206ENST00000541640 UGGT2Q9NYU1 1516 aa19.2■□□□□ 0.66
PRKAB1-206ENST00000541640 TIMELESSQ9UNS1 1208 aa19.19■□□□□ 0.66
PRKAB1-206ENST00000541640 HFM1A2PYH4 1435 aa19.18■□□□□ 0.66
PRKAB1-206ENST00000541640 MAGI3Q5TCQ9 1506 aa19.17■□□□□ 0.66
PRKAB1-206ENST00000541640 PTPN23Q9H3S7 1636 aa19.16■□□□□ 0.66
PRKAB1-206ENST00000541640 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
PRKAB1-206ENST00000541640 SIN3AQ96ST3 1273 aa19.14■□□□□ 0.65
PRKAB1-206ENST00000541640 EPRSP07814 1512 aaKnown RBP19.13■□□□□ 0.65
PRKAB1-206ENST00000541640 TCOF1Q13428 1488 aaKnown RBP19.12■□□□□ 0.65
PRKAB1-206ENST00000541640 UACAQ9BZF9 1416 aa19.11■□□□□ 0.65
PRKAB1-206ENST00000541640 NAIPQ13075 1403 aa19.1■□□□□ 0.65
PRKAB1-206ENST00000541640 KIAA0586Q9BVV6 1533 aa19.08■□□□□ 0.64
PRKAB1-206ENST00000541640 MAGI1Q96QZ7 1491 aaPredicted RBP19.07■□□□□ 0.64
PRKAB1-206ENST00000541640 KIAA0556O60303 1618 aa19.06■□□□□ 0.64
PRKAB1-206ENST00000541640 GCC2Q8IWJ2 1684 aa19.05■□□□□ 0.64
PRKAB1-206ENST00000541640 CDK13Q14004 1512 aaKnown RBP19.05■□□□□ 0.64
PRKAB1-206ENST00000541640 PPP1R15AO75807 674 aaPredicted RBP19.04■□□□□ 0.64
PRKAB1-206ENST00000541640 MIA2Q96PC5 1412 aa19.04■□□□□ 0.64
PRKAB1-206ENST00000541640 AKNAQ7Z591 1439 aa19.03■□□□□ 0.64
PRKAB1-206ENST00000541640 DISP1Q96F81 1524 aa19.03■□□□□ 0.64
PRKAB1-206ENST00000541640 FBLN2P98095 1184 aa19.02■□□□□ 0.64
PRKAB1-206ENST00000541640 GRIN2AQ12879 1464 aa19.02■□□□□ 0.64
PRKAB1-206ENST00000541640 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.64
PRKAB1-206ENST00000541640 SYNJ2O15056 1496 aa19.01■□□□□ 0.63
PRKAB1-206ENST00000541640 TONSLQ96HA7 1378 aa18.97■□□□□ 0.63
PRKAB1-206ENST00000541640 RAPGEF6Q8TEU7 1601 aa18.97■□□□□ 0.63
PRKAB1-206ENST00000541640 NUP153P49790 1475 aaKnown RBP18.95■□□□□ 0.62
PRKAB1-206ENST00000541640 RRP7BPQ9NSQ0 103 aa18.9■□□□□ 0.62
PRKAB1-206ENST00000541640 CEP170Q5SW79 1584 aa18.9■□□□□ 0.62
PRKAB1-206ENST00000541640 KDM5BQ9UGL1 1544 aa18.9■□□□□ 0.62
PRKAB1-206ENST00000541640 KDM6BO15054 1643 aa18.9■□□□□ 0.62
PRKAB1-206ENST00000541640 DENND4BO75064 1496 aaPredicted RBP18.89■□□□□ 0.61
PRKAB1-206ENST00000541640 DNMT1P26358 1616 aaKnown RBP18.88■□□□□ 0.61
PRKAB1-206ENST00000541640 CHIC2Q9UKJ5 165 aa18.88■□□□□ 0.61
PRKAB1-206ENST00000541640 CHD1O14646 1710 aa18.88■□□□□ 0.61
PRKAB1-206ENST00000541640 DDX10Q13206 875 aaKnown RBP18.87■□□□□ 0.61
PRKAB1-206ENST00000541640 ROCK1Q13464 1354 aa18.87■□□□□ 0.61
PRKAB1-206ENST00000541640 DAPK1P53355 1430 aa18.86■□□□□ 0.61
PRKAB1-206ENST00000541640 ARID3CA6NKF2 412 aa18.86■□□□□ 0.61
PRKAB1-206ENST00000541640 CDK11AQ9UQ88 783 aaPredicted RBP18.85■□□□□ 0.61
PRKAB1-206ENST00000541640 NUP160Q12769 1436 aa18.84■□□□□ 0.61
PRKAB1-206ENST00000541640 ADCY10Q96PN6 1610 aa18.82■□□□□ 0.6
PRKAB1-206ENST00000541640 ABCC5O15440 1437 aa18.82■□□□□ 0.6
PRKAB1-206ENST00000541640 TROQ12816 1431 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms