RNA–Protein interactions for RNA: ENST00000541517.5

TPCN1-204, Transcript of two pore segment channel 1, humanhuman

TSL 5 BASIC

Gene TPCN1, Length 5,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-204ENST00000541517 PDS5BQ9NTI5 1447 aa16.24■□□□□ 0.19
TPCN1-204ENST00000541517 CFDP1Q9UEE9 299 aaPredicted RBP16.23■□□□□ 0.19
TPCN1-204ENST00000541517 STAG3Q9UJ98 1225 aa16.22■□□□□ 0.19
TPCN1-204ENST00000541517 CANXP27824 592 aaKnown RBP16.2■□□□□ 0.18
TPCN1-204ENST00000541517 CCNB3Q8WWL7 1395 aa16.2■□□□□ 0.18
TPCN1-204ENST00000541517 RTL5Q5HYW3 569 aaPredicted RBP16.2■□□□□ 0.18
TPCN1-204ENST00000541517 EIF4G2P78344 907 aaKnown RBP eCLIP16.2■□□□□ 0.184e-15■■■■■ 38.4
TPCN1-204ENST00000541517 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.18
TPCN1-204ENST00000541517 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
TPCN1-204ENST00000541517 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
TPCN1-204ENST00000541517 KDM2AQ9Y2K7 1162 aa16.16■□□□□ 0.18
TPCN1-204ENST00000541517 ZBTB47Q9UFB7 747 aaPredicted RBP16.15■□□□□ 0.18
TPCN1-204ENST00000541517 FAM9BQ8IZU0 186 aa16.14■□□□□ 0.17
TPCN1-204ENST00000541517 EIF4G1Q04637 1599 aaKnown RBP16.14■□□□□ 0.17
TPCN1-204ENST00000541517 MIER1Q8N108 512 aa16.14■□□□□ 0.17
TPCN1-204ENST00000541517 TMC1Q8TDI8 760 aa16.13■□□□□ 0.17
TPCN1-204ENST00000541517 FKBP8Q14318 412 aa16.1■□□□□ 0.17
TPCN1-204ENST00000541517 MRS2Q9HD23 443 aa16.09■□□□□ 0.17
TPCN1-204ENST00000541517 HIRIP3Q9BW71 556 aaPredicted RBP16.07■□□□□ 0.16
TPCN1-204ENST00000541517 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
TPCN1-204ENST00000541517 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
TPCN1-204ENST00000541517 ARHGAP35Q9NRY4 1499 aa16.06■□□□□ 0.16
TPCN1-204ENST00000541517 TIMELESSQ9UNS1 1208 aa16.05■□□□□ 0.16
TPCN1-204ENST00000541517 RAPGEF2Q9Y4G8 1499 aa16.05■□□□□ 0.16
TPCN1-204ENST00000541517 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.15
TPCN1-204ENST00000541517 KANK4Q5T7N3 995 aaPredicted RBP16.02■□□□□ 0.15
TPCN1-204ENST00000541517 WDR43Q15061 677 aaKnown RBP eCLIP16.01■□□□□ 0.15
TPCN1-204ENST00000541517 SETD5Q9C0A6 1442 aa16.01■□□□□ 0.15
TPCN1-204ENST00000541517 SLC24A1O60721 1099 aa16.01■□□□□ 0.15
TPCN1-204ENST00000541517 SIN3AQ96ST3 1273 aa16■□□□□ 0.15
TPCN1-204ENST00000541517 RGL3Q3MIN7 710 aa15.98■□□□□ 0.15
TPCN1-204ENST00000541517 ANP32AP39687 249 aaKnown RBP15.98■□□□□ 0.15
TPCN1-204ENST00000541517 CDCA8Q53HL2 280 aa15.96■□□□□ 0.15
TPCN1-204ENST00000541517 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.95■□□□□ 0.14
TPCN1-204ENST00000541517 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
TPCN1-204ENST00000541517 CARD11Q9BXL7 1154 aa15.95■□□□□ 0.14
TPCN1-204ENST00000541517 SALL2Q9Y467 1007 aaPredicted RBP15.95■□□□□ 0.14
TPCN1-204ENST00000541517 PLPPR3Q6T4P5 718 aa15.91■□□□□ 0.14
TPCN1-204ENST00000541517 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
TPCN1-204ENST00000541517 RUSC2Q8N2Y8 1516 aa15.91■□□□□ 0.14
TPCN1-204ENST00000541517 CCDC136Q96JN2 1154 aa15.89■□□□□ 0.13
TPCN1-204ENST00000541517 FHOD3Q2V2M9 1422 aa15.88■□□□□ 0.13
TPCN1-204ENST00000541517 PPP1R15AO75807 674 aaPredicted RBP15.88■□□□□ 0.13
TPCN1-204ENST00000541517 RAB3GAP2Q9H2M9 1393 aa15.87■□□□□ 0.13
TPCN1-204ENST00000541517 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
TPCN1-204ENST00000541517 BCL11AQ9H165 835 aa15.84■□□□□ 0.13
TPCN1-204ENST00000541517 KNSTRNQ9Y448 316 aa15.84■□□□□ 0.13
TPCN1-204ENST00000541517 KANK1Q14678 1352 aa15.84■□□□□ 0.13
TPCN1-204ENST00000541517 NPM2Q86SE8 214 aaKnown RBP15.81■□□□□ 0.12
TPCN1-204ENST00000541517 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
TPCN1-204ENST00000541517 FGD5Q6ZNL6 1462 aa15.8■□□□□ 0.12
TPCN1-204ENST00000541517 UPF2Q9HAU5 1272 aaKnown RBP15.8■□□□□ 0.12
TPCN1-204ENST00000541517 ANKRD30AQ9BXX3 1397 aa15.79■□□□□ 0.12
TPCN1-204ENST00000541517 DCAF11Q8TEB1 546 aa15.79■□□□□ 0.12
TPCN1-204ENST00000541517 CFAP53Q96M91 514 aa15.78■□□□□ 0.12
TPCN1-204ENST00000541517 IGF1RP08069 1367 aa15.78■□□□□ 0.12
TPCN1-204ENST00000541517 PKD2Q13563 968 aa15.77■□□□□ 0.12
TPCN1-204ENST00000541517 EFCAB2Q5VUJ9 269 aa15.77■□□□□ 0.11
TPCN1-204ENST00000541517 MPHOSPH9Q99550 1183 aa15.76■□□□□ 0.11
TPCN1-204ENST00000541517 JPH4Q96JJ6 628 aa15.75■□□□□ 0.11
TPCN1-204ENST00000541517 ARID4BQ4LE39 1312 aaPredicted RBP15.75■□□□□ 0.11
TPCN1-204ENST00000541517 RSPH4AQ5TD94 716 aa15.74■□□□□ 0.11
TPCN1-204ENST00000541517 TMF1P82094 1093 aa15.74■□□□□ 0.11
TPCN1-204ENST00000541517 IRX6P78412 446 aaPredicted RBP15.73■□□□□ 0.11
TPCN1-204ENST00000541517 CCER2I3L3R5 266 aa15.73■□□□□ 0.11
TPCN1-204ENST00000541517 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
TPCN1-204ENST00000541517 NUP155O75694 1391 aa15.72■□□□□ 0.11
TPCN1-204ENST00000541517 HSPA5P11021 654 aaKnown RBP15.71■□□□□ 0.11
TPCN1-204ENST00000541517 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
TPCN1-204ENST00000541517 CFTRP13569 1480 aa15.69■□□□□ 0.1
TPCN1-204ENST00000541517 POGKQ9P215 609 aa15.68■□□□□ 0.1
TPCN1-204ENST00000541517 RAD54L2Q9Y4B4 1467 aa15.67■□□□□ 0.1
TPCN1-204ENST00000541517 FOXD1Q16676 465 aa15.67■□□□□ 0.1
TPCN1-204ENST00000541517 HMGXB3Q12766 1538 aa15.66■□□□□ 0.1
TPCN1-204ENST00000541517 SUPT16HQ9Y5B9 1047 aaKnown RBP15.65■□□□□ 0.1
TPCN1-204ENST00000541517 KIF21BO75037 1637 aa15.65■□□□□ 0.1
TPCN1-204ENST00000541517 HSP90AA1P07900 732 aaKnown RBP15.64■□□□□ 0.1
TPCN1-204ENST00000541517 DHX57Q6P158 1386 aaKnown RBP15.64■□□□□ 0.09
TPCN1-204ENST00000541517 NUDCQ9Y266 331 aa15.64■□□□□ 0.09
TPCN1-204ENST00000541517 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
TPCN1-204ENST00000541517 MYH16Q9H6N6 1097 aa15.64■□□□□ 0.09
TPCN1-204ENST00000541517 HDGFP51858 240 aaKnown RBP15.62■□□□□ 0.09
TPCN1-204ENST00000541517 CC2D1BQ5T0F9 858 aaKnown RBP15.62■□□□□ 0.09
TPCN1-204ENST00000541517 HNRNPMP52272 730 aaKnown RBP eCLIP15.62■□□□□ 0.09
TPCN1-204ENST00000541517 GGT6Q6P531 493 aa15.61■□□□□ 0.09
TPCN1-204ENST00000541517 SYNJ1O43426 1573 aa15.61■□□□□ 0.09
TPCN1-204ENST00000541517 C14orf37Q86TY3 774 aa15.61■□□□□ 0.09
TPCN1-204ENST00000541517 PTPRGP23470 1445 aa15.61■□□□□ 0.09
TPCN1-204ENST00000541517 MAPK8IP3Q9UPT6 1336 aa15.6■□□□□ 0.09
TPCN1-204ENST00000541517 ROCK2O75116 1388 aaKnown RBP15.59■□□□□ 0.09
TPCN1-204ENST00000541517 L3MBTL2Q969R5 705 aa15.59■□□□□ 0.09
TPCN1-204ENST00000541517 SPAG9O60271 1321 aaKnown RBP15.58■□□□□ 0.09
TPCN1-204ENST00000541517 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
TPCN1-204ENST00000541517 PPM1GO15355 546 aaPredicted RBP15.57■□□□□ 0.08
TPCN1-204ENST00000541517 TOP2BQ02880 1626 aa15.56■□□□□ 0.08
TPCN1-204ENST00000541517 KTN1Q86UP2 1357 aaKnown RBP15.56■□□□□ 0.08
TPCN1-204ENST00000541517 CUX1P39880 1505 aa15.55■□□□□ 0.08
TPCN1-204ENST00000541517 SENP3-EIF4A1A0A087X0R7 540 aa15.54■□□□□ 0.08
TPCN1-204ENST00000541517 KIF3BO15066 747 aa15.54■□□□□ 0.08
TPCN1-204ENST00000541517 PNNQ9H307 717 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms