RNA–Protein interactions for RNA: ENST00000541517.5

TPCN1-204, Transcript of two pore segment channel 1, humanhuman

TSL 5 BASIC

Gene TPCN1, Length 5,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-204ENST00000541517 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
TPCN1-204ENST00000541517 DCAF8L2P0C7V8 631 aa20.94■□□□□ 0.94
TPCN1-204ENST00000541517 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
TPCN1-204ENST00000541517 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
TPCN1-204ENST00000541517 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
TPCN1-204ENST00000541517 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
TPCN1-204ENST00000541517 APLP2Q06481 763 aa18.71■□□□□ 0.59
TPCN1-204ENST00000541517 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
TPCN1-204ENST00000541517 PCGF6Q9BYE7 350 aa18.44■□□□□ 0.54
TPCN1-204ENST00000541517 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.52
TPCN1-204ENST00000541517 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.51
TPCN1-204ENST00000541517 ZEB1P37275 1124 aaPredicted RBP18.22■□□□□ 0.51
TPCN1-204ENST00000541517 RANGAP1P46060 587 aaPredicted RBP18.2■□□□□ 0.5
TPCN1-204ENST00000541517 ABCC9O60706 1549 aa18.17■□□□□ 0.5
TPCN1-204ENST00000541517 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
TPCN1-204ENST00000541517 CCER1Q8TC90 406 aaPredicted RBP18.06■□□□□ 0.48
TPCN1-204ENST00000541517 PELP1Q8IZL8 1130 aaKnown RBP18.04■□□□□ 0.48
TPCN1-204ENST00000541517 ATP1B4Q9UN42 357 aaPredicted RBP18.02■□□□□ 0.48
TPCN1-204ENST00000541517 TRIM26Q12899 539 aaPredicted RBP17.94■□□□□ 0.46
TPCN1-204ENST00000541517 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
TPCN1-204ENST00000541517 CCDC180Q9P1Z9 1646 aa17.88■□□□□ 0.45
TPCN1-204ENST00000541517 LOC105371045A0A1W2PR82 267 aa17.88■□□□□ 0.45
TPCN1-204ENST00000541517 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.456e-6■■■■□ 21.1
TPCN1-204ENST00000541517 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
TPCN1-204ENST00000541517 CENPBP07199 599 aaPredicted RBP17.77■□□□□ 0.44
TPCN1-204ENST00000541517 HRCP23327 699 aa17.66■□□□□ 0.42
TPCN1-204ENST00000541517 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
TPCN1-204ENST00000541517 ITGAEP38570 1179 aa17.49■□□□□ 0.39
TPCN1-204ENST00000541517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.49■□□□□ 0.39
TPCN1-204ENST00000541517 HNRNPUL2Q1KMD3 747 aaKnown RBP17.49■□□□□ 0.39
TPCN1-204ENST00000541517 YTHDC1Q96MU7 727 aaKnown RBP17.33■□□□□ 0.37
TPCN1-204ENST00000541517 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
TPCN1-204ENST00000541517 NEFLP07196 543 aa17.31■□□□□ 0.36
TPCN1-204ENST00000541517 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
TPCN1-204ENST00000541517 NACADO15069 1562 aa17.25■□□□□ 0.35
TPCN1-204ENST00000541517 MYT1LQ9UL68 1186 aa17.23■□□□□ 0.35
TPCN1-204ENST00000541517 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.35
TPCN1-204ENST00000541517 DCAF1Q9Y4B6 1507 aa17.2■□□□□ 0.34
TPCN1-204ENST00000541517 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
TPCN1-204ENST00000541517 MYT1Q01538 1121 aa17.12■□□□□ 0.33
TPCN1-204ENST00000541517 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
TPCN1-204ENST00000541517 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
TPCN1-204ENST00000541517 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
TPCN1-204ENST00000541517 TRIM52Q96A61 297 aa17.02■□□□□ 0.32
TPCN1-204ENST00000541517 FBLN2P98095 1184 aa17.01■□□□□ 0.31
TPCN1-204ENST00000541517 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
TPCN1-204ENST00000541517 NEUROD1Q13562 356 aa16.93■□□□□ 0.3
TPCN1-204ENST00000541517 EEA1Q15075 1411 aa16.89■□□□□ 0.29
TPCN1-204ENST00000541517 BAZ1AQ9NRL2 1556 aaPredicted RBP16.89■□□□□ 0.29
TPCN1-204ENST00000541517 CDK11AQ9UQ88 783 aaPredicted RBP16.87■□□□□ 0.29
TPCN1-204ENST00000541517 BAZ1BQ9UIG0 1483 aaKnown RBP16.85■□□□□ 0.29
TPCN1-204ENST00000541517 ZNF316A6NFI3 1004 aaPredicted RBP16.83■□□□□ 0.29
TPCN1-204ENST00000541517 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
TPCN1-204ENST00000541517 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
TPCN1-204ENST00000541517 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
TPCN1-204ENST00000541517 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.27
TPCN1-204ENST00000541517 ARID3CA6NKF2 412 aa16.77■□□□□ 0.27
TPCN1-204ENST00000541517 CLIP1P30622 1438 aa16.76■□□□□ 0.27
TPCN1-204ENST00000541517 GOLGA3Q08378 1498 aa16.75■□□□□ 0.27
TPCN1-204ENST00000541517 ANP32CO43423 234 aa16.73■□□□□ 0.27
TPCN1-204ENST00000541517 ZNF326Q5BKZ1 582 aaKnown RBP16.7■□□□□ 0.26
TPCN1-204ENST00000541517 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
TPCN1-204ENST00000541517 ZNF777Q9ULD5 760 aaPredicted RBP16.68■□□□□ 0.26
TPCN1-204ENST00000541517 CEP162Q5TB80 1403 aa16.67■□□□□ 0.26
TPCN1-204ENST00000541517 KIF27Q86VH2 1401 aa16.64■□□□□ 0.25
TPCN1-204ENST00000541517 TNIKQ9UKE5 1360 aa16.63■□□□□ 0.25
TPCN1-204ENST00000541517 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
TPCN1-204ENST00000541517 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
TPCN1-204ENST00000541517 MTUS2Q5JR59 1369 aa16.59■□□□□ 0.25
TPCN1-204ENST00000541517 TONSLQ96HA7 1378 aa16.58■□□□□ 0.25
TPCN1-204ENST00000541517 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.25
TPCN1-204ENST00000541517 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
TPCN1-204ENST00000541517 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
TPCN1-204ENST00000541517 GTF3C3Q9Y5Q9 886 aa16.5■□□□□ 0.23
TPCN1-204ENST00000541517 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
TPCN1-204ENST00000541517 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
TPCN1-204ENST00000541517 CHIC2Q9UKJ5 165 aa16.46■□□□□ 0.22
TPCN1-204ENST00000541517 TSPY4P0CV99 314 aa16.44■□□□□ 0.22
TPCN1-204ENST00000541517 TSPY10P0CW01 314 aa16.44■□□□□ 0.22
TPCN1-204ENST00000541517 ACIN1Q9UKV3 1341 aaKnown RBP16.44■□□□□ 0.22
TPCN1-204ENST00000541517 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
TPCN1-204ENST00000541517 SOGA1O94964 1423 aa16.41■□□□□ 0.22
TPCN1-204ENST00000541517 CLSPNQ9HAW4 1339 aa16.37■□□□□ 0.21
TPCN1-204ENST00000541517 WIZO95785 1651 aa16.36■□□□□ 0.21
TPCN1-204ENST00000541517 CUX2O14529 1486 aa16.35■□□□□ 0.21
TPCN1-204ENST00000541517 BCANQ96GW7 911 aa16.35■□□□□ 0.21
TPCN1-204ENST00000541517 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
TPCN1-204ENST00000541517 PLEKHD1A6NEE1 506 aa16.34■□□□□ 0.21
TPCN1-204ENST00000541517 ABCC8Q09428 1581 aa16.33■□□□□ 0.2
TPCN1-204ENST00000541517 FHAD1B1AJZ9 1412 aa16.33■□□□□ 0.2
TPCN1-204ENST00000541517 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.2
TPCN1-204ENST00000541517 ERCC6Q03468 1493 aa16.31■□□□□ 0.2
TPCN1-204ENST00000541517 ESF1Q9H501 851 aaKnown RBP16.3■□□□□ 0.2
TPCN1-204ENST00000541517 RRP7BPQ9NSQ0 103 aa16.29■□□□□ 0.2
TPCN1-204ENST00000541517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.28■□□□□ 0.24e-7■■□□□ 13.1
TPCN1-204ENST00000541517 NEFMP07197 916 aa16.27■□□□□ 0.2
TPCN1-204ENST00000541517 SMARCA4P51532 1647 aa16.27■□□□□ 0.19
TPCN1-204ENST00000541517 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
TPCN1-204ENST00000541517 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
TPCN1-204ENST00000541517 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms