RNA–Protein interactions for RNA: ENST00000541064.5

NPC2-203, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2 BASIC

Gene NPC2, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-203ENST00000541064 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
NPC2-203ENST00000541064 DNMBPQ6XZF7 1577 aa14.9□□□□□ -0.02
NPC2-203ENST00000541064 IFT140Q96RY7 1462 aa14.88□□□□□ -0.03
NPC2-203ENST00000541064 OSCARQ8IYS5 282 aa14.86□□□□□ -0.03
NPC2-203ENST00000541064 FBLN2P98095 1184 aa14.85□□□□□ -0.03
NPC2-203ENST00000541064 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
NPC2-203ENST00000541064 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
NPC2-203ENST00000541064 SOGA1O94964 1423 aa14.78□□□□□ -0.04
NPC2-203ENST00000541064 CUX1P39880 1505 aa14.76□□□□□ -0.05
NPC2-203ENST00000541064 ZNF608Q9ULD9 1512 aaPredicted RBP14.76□□□□□ -0.05
NPC2-203ENST00000541064 TARBP1Q13395 1621 aaKnown RBP14.74□□□□□ -0.05
NPC2-203ENST00000541064 WRNQ14191 1432 aaPredicted RBP eCLIP14.74□□□□□ -0.05
NPC2-203ENST00000541064 CHRDL2Q6WN34 429 aa14.74□□□□□ -0.05
NPC2-203ENST00000541064 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
NPC2-203ENST00000541064 RAD54L2Q9Y4B4 1467 aa14.71□□□□□ -0.05
NPC2-203ENST00000541064 AQRO60306 1485 aaKnown RBP eCLIP14.7□□□□□ -0.06
NPC2-203ENST00000541064 TDRD9Q8NDG6 1382 aaKnown RBP14.69□□□□□ -0.06
NPC2-203ENST00000541064 REM2Q8IYK8 340 aaPredicted RBP14.68□□□□□ -0.06
NPC2-203ENST00000541064 EIF4G3O43432 1585 aaKnown RBP14.68□□□□□ -0.06
NPC2-203ENST00000541064 WDR97A6NE52 1622 aa14.68□□□□□ -0.06
NPC2-203ENST00000541064 BIVM-ERCC5R4GMW8 1640 aa14.67□□□□□ -0.06
NPC2-203ENST00000541064 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
NPC2-203ENST00000541064 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
NPC2-203ENST00000541064 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
NPC2-203ENST00000541064 SYNJ1O43426 1573 aa14.66□□□□□ -0.06
NPC2-203ENST00000541064 TOP2BQ02880 1626 aa14.66□□□□□ -0.06
NPC2-203ENST00000541064 EEA1Q15075 1411 aa14.66□□□□□ -0.06
NPC2-203ENST00000541064 MKRN4PQ13434 485 aaPredicted RBP14.64□□□□□ -0.07
NPC2-203ENST00000541064 ABCA10Q8WWZ4 1543 aa14.62□□□□□ -0.07
NPC2-203ENST00000541064 GRIN2BQ13224 1484 aa14.6□□□□□ -0.07
NPC2-203ENST00000541064 GAPVD1Q14C86 1478 aa14.58□□□□□ -0.08
NPC2-203ENST00000541064 CHMP7Q8WUX9 453 aaPredicted RBP14.57□□□□□ -0.08
NPC2-203ENST00000541064 MAGI1Q96QZ7 1491 aaPredicted RBP14.56□□□□□ -0.08
NPC2-203ENST00000541064 SNAPC4Q5SXM2 1469 aa14.54□□□□□ -0.08
NPC2-203ENST00000541064 ZNF692Q9BU19 519 aaPredicted RBP14.53□□□□□ -0.08
NPC2-203ENST00000541064 ABCA5Q8WWZ7 1642 aa14.51□□□□□ -0.09
NPC2-203ENST00000541064 CHD1O14646 1710 aa14.5□□□□□ -0.09
NPC2-203ENST00000541064 SYNJ2O15056 1496 aa14.5□□□□□ -0.09
NPC2-203ENST00000541064 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
NPC2-203ENST00000541064 PBRM1Q86U86 1689 aa14.48□□□□□ -0.09
NPC2-203ENST00000541064 LOC105371045A0A1W2PR82 267 aa14.47□□□□□ -0.09
NPC2-203ENST00000541064 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
NPC2-203ENST00000541064 ERICH3Q5RHP9 1530 aa14.45□□□□□ -0.1
NPC2-203ENST00000541064 SSUH2Q9Y2M2 353 aa14.44□□□□□ -0.1
NPC2-203ENST00000541064 FHAD1B1AJZ9 1412 aa14.43□□□□□ -0.1
NPC2-203ENST00000541064 KIF21BO75037 1637 aa14.42□□□□□ -0.1
NPC2-203ENST00000541064 PIP4P2Q8N4L2 257 aa14.41□□□□□ -0.1
NPC2-203ENST00000541064 KIF27Q86VH2 1401 aa14.41□□□□□ -0.1
NPC2-203ENST00000541064 RUSC2Q8N2Y8 1516 aa14.41□□□□□ -0.1
NPC2-203ENST00000541064 ARHGEF11O15085 1522 aa14.4□□□□□ -0.1
NPC2-203ENST00000541064 SPDYE1Q8NFV5 336 aaPredicted RBP14.39□□□□□ -0.11
NPC2-203ENST00000541064 GOLGA3Q08378 1498 aa14.39□□□□□ -0.11
NPC2-203ENST00000541064 GRIN2AQ12879 1464 aa14.39□□□□□ -0.11
NPC2-203ENST00000541064 RIMBP3CA6NJZ7 1639 aa14.38□□□□□ -0.11
NPC2-203ENST00000541064 RIMBP3BA6NNM3 1639 aa14.38□□□□□ -0.11
NPC2-203ENST00000541064 RIMBP3Q9UFD9 1639 aa14.38□□□□□ -0.11
NPC2-203ENST00000541064 ADAMTS12P58397 1594 aa14.38□□□□□ -0.11
NPC2-203ENST00000541064 CLASP1Q7Z460 1538 aa14.37□□□□□ -0.11
NPC2-203ENST00000541064 IGF1RP08069 1367 aa14.37□□□□□ -0.11
NPC2-203ENST00000541064 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.11
NPC2-203ENST00000541064 CLEC11AQ9Y240 323 aa14.35□□□□□ -0.11
NPC2-203ENST00000541064 TNIKQ9UKE5 1360 aa14.34□□□□□ -0.11
NPC2-203ENST00000541064 NUP160Q12769 1436 aa14.33□□□□□ -0.12
NPC2-203ENST00000541064 CYB5RLQ6IPT4 315 aa14.32□□□□□ -0.12
NPC2-203ENST00000541064 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
NPC2-203ENST00000541064 CARMIL1Q5VZK9 1371 aa14.29□□□□□ -0.12
NPC2-203ENST00000541064 CUL7Q14999 1698 aa14.28□□□□□ -0.12
NPC2-203ENST00000541064 CEP170Q5SW79 1584 aa14.27□□□□□ -0.13
NPC2-203ENST00000541064 ARAP1Q96P48 1450 aa14.26□□□□□ -0.13
NPC2-203ENST00000541064 JPH4Q96JJ6 628 aa14.25□□□□□ -0.13
NPC2-203ENST00000541064 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
NPC2-203ENST00000541064 RAPGEF2Q9Y4G8 1499 aa14.23□□□□□ -0.13
NPC2-203ENST00000541064 SLC24A1O60721 1099 aa14.23□□□□□ -0.13
NPC2-203ENST00000541064 CEP162Q5TB80 1403 aa14.23□□□□□ -0.13
NPC2-203ENST00000541064 KIAA0586Q9BVV6 1533 aa14.21□□□□□ -0.13
NPC2-203ENST00000541064 SHROOM2Q13796 1616 aa14.2□□□□□ -0.14
NPC2-203ENST00000541064 UBTFP17480 764 aaKnown RBP14.2□□□□□ -0.14
NPC2-203ENST00000541064 RTN4Q9NQC3 1192 aaKnown RBP14.2□□□□□ -0.14
NPC2-203ENST00000541064 PRG4Q92954 1404 aaPredicted RBP14.19□□□□□ -0.14
NPC2-203ENST00000541064 HAX1O00165 279 aa14.16□□□□□ -0.14
NPC2-203ENST00000541064 PRKAR2AP13861 404 aaKnown RBP14.16□□□□□ -0.14
NPC2-203ENST00000541064 PRR29P0C7W0 189 aa14.15□□□□□ -0.14
NPC2-203ENST00000541064 ERCC6L2Q5T890 1561 aa14.13□□□□□ -0.15
NPC2-203ENST00000541064 CLIP1P30622 1438 aa14.11□□□□□ -0.15
NPC2-203ENST00000541064 SPDYE4A6NLX3 237 aa14.11□□□□□ -0.15
NPC2-203ENST00000541064 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
NPC2-203ENST00000541064 CARMIL2Q6F5E8 1435 aa14.09□□□□□ -0.15
NPC2-203ENST00000541064 IQGAP2Q13576 1575 aa14.07□□□□□ -0.16
NPC2-203ENST00000541064 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
NPC2-203ENST00000541064 PTPRGP23470 1445 aa14.03□□□□□ -0.16
NPC2-203ENST00000541064 VPS8Q8N3P4 1428 aa14.03□□□□□ -0.16
NPC2-203ENST00000541064 UGGT2Q9NYU1 1516 aa14.01□□□□□ -0.17
NPC2-203ENST00000541064 CTTNBP2Q8WZ74 1663 aa14□□□□□ -0.17
NPC2-203ENST00000541064 CHADLQ6NUI6 762 aa14□□□□□ -0.17
NPC2-203ENST00000541064 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
NPC2-203ENST00000541064 FKBP8Q14318 412 aa13.98□□□□□ -0.17
NPC2-203ENST00000541064 EFCAB5A4FU69 1503 aa13.98□□□□□ -0.17
NPC2-203ENST00000541064 DISP1Q96F81 1524 aa13.98□□□□□ -0.17
NPC2-203ENST00000541064 TRIM26Q12899 539 aaPredicted RBP13.98□□□□□ -0.17
NPC2-203ENST00000541064 ARHGAP35Q9NRY4 1499 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms