RNA–Protein interactions for RNA: ENST00000541064.5

NPC2-203, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2 BASIC

Gene NPC2, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-203ENST00000541064 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
NPC2-203ENST00000541064 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
NPC2-203ENST00000541064 SENP3Q9H4L4 574 aaPredicted RBP22.77■■□□□ 1.24
NPC2-203ENST00000541064 PHF23Q9BUL5 403 aaPredicted RBP22.48■■□□□ 1.19
NPC2-203ENST00000541064 FOXD1Q16676 465 aa21.14■□□□□ 0.98
NPC2-203ENST00000541064 PLPPR3Q6T4P5 718 aa20.48■□□□□ 0.87
NPC2-203ENST00000541064 NISCHQ9Y2I1 1504 aa20.46■□□□□ 0.87
NPC2-203ENST00000541064 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
NPC2-203ENST00000541064 ADRA2BP18089 450 aa19.85■□□□□ 0.77
NPC2-203ENST00000541064 PIAS4Q8N2W9 510 aaPredicted RBP19.84■□□□□ 0.77
NPC2-203ENST00000541064 MSH5O43196 834 aa19.8■□□□□ 0.76
NPC2-203ENST00000541064 POTEDQ86YR6 584 aa19■□□□□ 0.63
NPC2-203ENST00000541064 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
NPC2-203ENST00000541064 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
NPC2-203ENST00000541064 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
NPC2-203ENST00000541064 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
NPC2-203ENST00000541064 PPP4R3CPQ6ZMV5 832 aa17.96■□□□□ 0.47
NPC2-203ENST00000541064 ABCC9O60706 1549 aa17.86■□□□□ 0.45
NPC2-203ENST00000541064 CNKSR2Q8WXI2 1034 aa17.6■□□□□ 0.41
NPC2-203ENST00000541064 HOXD11P31277 338 aaPredicted RBP17.45■□□□□ 0.38
NPC2-203ENST00000541064 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
NPC2-203ENST00000541064 NCBP3Q53F19 620 aaKnown RBP17.38■□□□□ 0.37
NPC2-203ENST00000541064 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
NPC2-203ENST00000541064 RB1CC1Q8TDY2 1594 aa17.2■□□□□ 0.34
NPC2-203ENST00000541064 NACADO15069 1562 aa17.17■□□□□ 0.34
NPC2-203ENST00000541064 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
NPC2-203ENST00000541064 MYO15BQ96JP2 1530 aa17.08■□□□□ 0.32
NPC2-203ENST00000541064 NPM3O75607 178 aaKnown RBP17.04■□□□□ 0.32
NPC2-203ENST00000541064 ZCCHC6Q5VYS8 1495 aaKnown RBP17■□□□□ 0.31
NPC2-203ENST00000541064 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.31
NPC2-203ENST00000541064 DNAJC5BQ9UF47 199 aa16.93■□□□□ 0.3
NPC2-203ENST00000541064 CACNB1Q02641 598 aaPredicted RBP16.9■□□□□ 0.3
NPC2-203ENST00000541064 RNF39Q9H2S5 420 aa16.86■□□□□ 0.29
NPC2-203ENST00000541064 KCNA4P22459 653 aa16.83■□□□□ 0.28
NPC2-203ENST00000541064 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
NPC2-203ENST00000541064 UNC13AQ9UPW8 1703 aa16.71■□□□□ 0.26
NPC2-203ENST00000541064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
NPC2-203ENST00000541064 C1QBPQ07021 282 aaKnown RBP16.68■□□□□ 0.26
NPC2-203ENST00000541064 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
NPC2-203ENST00000541064 SCRIBQ14160 1630 aa16.55■□□□□ 0.24
NPC2-203ENST00000541064 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
NPC2-203ENST00000541064 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.19
NPC2-203ENST00000541064 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
NPC2-203ENST00000541064 EIF4G1Q04637 1599 aaKnown RBP16.2■□□□□ 0.18
NPC2-203ENST00000541064 CC2D2AQ9P2K1 1620 aa16.15■□□□□ 0.18
NPC2-203ENST00000541064 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
NPC2-203ENST00000541064 CECR2Q9BXF3 1484 aa16.09■□□□□ 0.17
NPC2-203ENST00000541064 CAPN15O75808 1086 aa16.02■□□□□ 0.16
NPC2-203ENST00000541064 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
NPC2-203ENST00000541064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.97■□□□□ 0.15
NPC2-203ENST00000541064 APLP2Q06481 763 aa15.97■□□□□ 0.15
NPC2-203ENST00000541064 HNRNPUL2Q1KMD3 747 aaKnown RBP15.97■□□□□ 0.15
NPC2-203ENST00000541064 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
NPC2-203ENST00000541064 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
NPC2-203ENST00000541064 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
NPC2-203ENST00000541064 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
NPC2-203ENST00000541064 NCAPD3P42695 1498 aa15.86■□□□□ 0.13
NPC2-203ENST00000541064 SMARCA4P51532 1647 aa15.86■□□□□ 0.13
NPC2-203ENST00000541064 DSG3P32926 999 aa15.85■□□□□ 0.13
NPC2-203ENST00000541064 ATAD2BQ9ULI0 1458 aa15.82■□□□□ 0.12
NPC2-203ENST00000541064 SMARCA2P51531 1590 aa15.82■□□□□ 0.12
NPC2-203ENST00000541064 TRHP20396 242 aaPredicted RBP15.8■□□□□ 0.12
NPC2-203ENST00000541064 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
NPC2-203ENST00000541064 ZNF219Q9P2Y4 722 aaPredicted RBP15.78■□□□□ 0.12
NPC2-203ENST00000541064 HMGXB3Q12766 1538 aa15.74■□□□□ 0.11
NPC2-203ENST00000541064 MROH2BQ7Z745 1585 aa15.73■□□□□ 0.11
NPC2-203ENST00000541064 PEG3Q9GZU2 1588 aa15.73■□□□□ 0.11
NPC2-203ENST00000541064 SUPT5HO00267 1087 aaKnown RBP15.71■□□□□ 0.11
NPC2-203ENST00000541064 FOXD4L1Q9NU39 408 aa15.7■□□□□ 0.1
NPC2-203ENST00000541064 BAZ1BQ9UIG0 1483 aaKnown RBP15.69■□□□□ 0.1
NPC2-203ENST00000541064 RSF1Q96T23 1441 aaPredicted RBP15.65■□□□□ 0.1
NPC2-203ENST00000541064 ABCB7O75027 752 aa15.63■□□□□ 0.09
NPC2-203ENST00000541064 WIZO95785 1651 aa15.54■□□□□ 0.08
NPC2-203ENST00000541064 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
NPC2-203ENST00000541064 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
NPC2-203ENST00000541064 LAMC3Q9Y6N6 1575 aa15.43■□□□□ 0.06
NPC2-203ENST00000541064 ZBTB22O15209 634 aa15.43■□□□□ 0.06
NPC2-203ENST00000541064 NESP48681 1621 aa15.42■□□□□ 0.06
NPC2-203ENST00000541064 POLA2Q14181 598 aa15.41■□□□□ 0.06
NPC2-203ENST00000541064 CADPSQ9ULU8 1353 aa15.41■□□□□ 0.06
NPC2-203ENST00000541064 TOP2AP11388 1531 aaKnown RBP15.4■□□□□ 0.06
NPC2-203ENST00000541064 PDS5BQ9NTI5 1447 aa15.38■□□□□ 0.05
NPC2-203ENST00000541064 ATF5Q9Y2D1 282 aaPredicted RBP15.34■□□□□ 0.05
NPC2-203ENST00000541064 CUX2O14529 1486 aa15.32■□□□□ 0.04
NPC2-203ENST00000541064 CFTRP13569 1480 aa15.27■□□□□ 0.03
NPC2-203ENST00000541064 CCDC88BA6NC98 1476 aa15.24■□□□□ 0.03
NPC2-203ENST00000541064 ATXN8OSP0DMR3 200 aa15.23■□□□□ 0.03
NPC2-203ENST00000541064 KIF21AQ7Z4S6 1674 aa15.21■□□□□ 0.03
NPC2-203ENST00000541064 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
NPC2-203ENST00000541064 FANCD2Q9BXW9 1451 aa15.18■□□□□ 0.02
NPC2-203ENST00000541064 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
NPC2-203ENST00000541064 CEP164Q9UPV0 1460 aa15.17■□□□□ 0.02
NPC2-203ENST00000541064 MRC2Q9UBG0 1479 aa15.17■□□□□ 0.02
NPC2-203ENST00000541064 ZBTB12Q9Y330 459 aaPredicted RBP15.15■□□□□ 0.02
NPC2-203ENST00000541064 WDR62O43379 1518 aa15.09■□□□□ 0.01
NPC2-203ENST00000541064 PRDM2Q13029 1718 aa15.08■□□□□ 0
NPC2-203ENST00000541064 URB2Q14146 1524 aaKnown RBP15.01□□□□□ -0.01
NPC2-203ENST00000541064 ABCC8Q09428 1581 aa15□□□□□ -0.01
NPC2-203ENST00000541064 TRIM41Q8WV44 630 aa14.99□□□□□ -0.01
NPC2-203ENST00000541064 POTEHQ6S545 545 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms