RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 FAM69CQ0P6D2 419 aa21.89■■□□□ 1.09
COPS7A-211ENST00000540408 RUSC2Q8N2Y8 1516 aa21.89■■□□□ 1.09
COPS7A-211ENST00000540408 KIF27Q86VH2 1401 aa21.88■■□□□ 1.09
COPS7A-211ENST00000540408 IGF1RP08069 1367 aa21.87■■□□□ 1.09
COPS7A-211ENST00000540408 KIAA0586Q9BVV6 1533 aa21.85■■□□□ 1.09
COPS7A-211ENST00000540408 KIF13AQ9H1H9 1805 aa21.85■■□□□ 1.09
COPS7A-211ENST00000540408 ABCC10Q5T3U5 1492 aa21.82■■□□□ 1.08
COPS7A-211ENST00000540408 CUL7Q14999 1698 aa21.79■■□□□ 1.08
COPS7A-211ENST00000540408 MAPKBP1O60336 1514 aa21.79■■□□□ 1.08
COPS7A-211ENST00000540408 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
COPS7A-211ENST00000540408 ADCY10Q96PN6 1610 aa21.74■■□□□ 1.07
COPS7A-211ENST00000540408 PTPRGP23470 1445 aa21.72■■□□□ 1.07
COPS7A-211ENST00000540408 TTBK1Q5TCY1 1321 aaPredicted RBP21.71■■□□□ 1.07
COPS7A-211ENST00000540408 DIP2BQ9P265 1576 aa21.7■■□□□ 1.06
COPS7A-211ENST00000540408 CARMIL2Q6F5E8 1435 aa21.7■■□□□ 1.06
COPS7A-211ENST00000540408 TNIKQ9UKE5 1360 aa21.66■■□□□ 1.06
COPS7A-211ENST00000540408 KDM6BO15054 1643 aa21.61■■□□□ 1.05
COPS7A-211ENST00000540408 IQGAP2Q13576 1575 aa21.58■■□□□ 1.05
COPS7A-211ENST00000540408 ABCC2Q92887 1545 aa21.58■■□□□ 1.04
COPS7A-211ENST00000540408 TSPOAP1O95153 1857 aa21.58■■□□□ 1.04
COPS7A-211ENST00000540408 PLB1Q6P1J6 1458 aa21.55■■□□□ 1.04
COPS7A-211ENST00000540408 ASXL2Q76L83 1435 aa21.53■■□□□ 1.04
COPS7A-211ENST00000540408 UACAQ9BZF9 1416 aa21.53■■□□□ 1.04
COPS7A-211ENST00000540408 UHRF1BP1LA0JNW5 1464 aa21.52■■□□□ 1.03
COPS7A-211ENST00000540408 RAPGEF2Q9Y4G8 1499 aa21.51■■□□□ 1.03
COPS7A-211ENST00000540408 KDM4FA0A1W2PPD8 638 aa21.49■■□□□ 1.03
COPS7A-211ENST00000540408 DISP1Q96F81 1524 aa21.47■■□□□ 1.03
COPS7A-211ENST00000540408 GLI2P10070 1586 aa21.46■■□□□ 1.03
COPS7A-211ENST00000540408 UGGT2Q9NYU1 1516 aa21.44■■□□□ 1.02
COPS7A-211ENST00000540408 KDM5BQ9UGL1 1544 aa21.41■■□□□ 1.02
COPS7A-211ENST00000540408 EPRSP07814 1512 aaKnown RBP21.38■■□□□ 1.01
COPS7A-211ENST00000540408 KIAA0556O60303 1618 aa21.37■■□□□ 1.01
COPS7A-211ENST00000540408 TEX14Q8IWB6 1497 aa21.36■■□□□ 1.01
COPS7A-211ENST00000540408 PPRC1Q5VV67 1664 aaKnown RBP21.34■■□□□ 1.01
COPS7A-211ENST00000540408 FAM9AQ8IZU1 332 aaPredicted RBP21.34■■□□□ 1.01
COPS7A-211ENST00000540408 ZCCHC11Q5TAX3 1644 aaKnown RBP21.33■■□□□ 1.01
COPS7A-211ENST00000540408 GOLGA3Q08378 1498 aa21.32■■□□□ 1
COPS7A-211ENST00000540408 MAP3K4Q9Y6R4 1608 aa21.3■■□□□ 1
COPS7A-211ENST00000540408 WDR7Q9Y4E6 1490 aa21.29■■□□□ 1
COPS7A-211ENST00000540408 COL17A1Q9UMD9 1497 aaPredicted RBP21.27■■□□□ 1
COPS7A-211ENST00000540408 CTTNBP2Q8WZ74 1663 aa21.26■□□□□ 0.99
COPS7A-211ENST00000540408 KCNH8Q96L42 1107 aa21.26■□□□□ 0.99
COPS7A-211ENST00000540408 ADGRL1O94910 1474 aa21.26■□□□□ 0.99
COPS7A-211ENST00000540408 CD109Q6YHK3 1445 aa21.21■□□□□ 0.99
COPS7A-211ENST00000540408 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
COPS7A-211ENST00000540408 ABCA8O94911 1581 aa21.18■□□□□ 0.98
COPS7A-211ENST00000540408 MAGI3Q5TCQ9 1506 aa21.17■□□□□ 0.98
COPS7A-211ENST00000540408 CFAP43Q8NDM7 1665 aa21.15■□□□□ 0.98
COPS7A-211ENST00000540408 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
COPS7A-211ENST00000540408 ARID3CA6NKF2 412 aa21.09■□□□□ 0.97
COPS7A-211ENST00000540408 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
COPS7A-211ENST00000540408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.05■□□□□ 0.96
COPS7A-211ENST00000540408 HNRNPUL2Q1KMD3 747 aaKnown RBP21.05■□□□□ 0.96
COPS7A-211ENST00000540408 ATP10BO94823 1461 aa21.05■□□□□ 0.96
COPS7A-211ENST00000540408 ILDR1Q86SU0 546 aaPredicted RBP21.04■□□□□ 0.96
COPS7A-211ENST00000540408 PHLDB1Q86UU1 1377 aa21.03■□□□□ 0.96
COPS7A-211ENST00000540408 ARAP3Q8WWN8 1544 aa21.01■□□□□ 0.95
COPS7A-211ENST00000540408 HECW2Q9P2P5 1572 aa20.99■□□□□ 0.95
COPS7A-211ENST00000540408 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
COPS7A-211ENST00000540408 SAMD9Q5K651 1589 aa20.95■□□□□ 0.94
COPS7A-211ENST00000540408 ABCA9Q8IUA7 1624 aa20.94■□□□□ 0.94
COPS7A-211ENST00000540408 EEA1Q15075 1411 aa20.94■□□□□ 0.94
COPS7A-211ENST00000540408 RAPGEF6Q8TEU7 1601 aa20.93■□□□□ 0.94
COPS7A-211ENST00000540408 KIF21BO75037 1637 aa20.93■□□□□ 0.94
COPS7A-211ENST00000540408 RAPGEF3O95398 923 aa20.92■□□□□ 0.94
COPS7A-211ENST00000540408 PLEKHD1A6NEE1 506 aa20.91■□□□□ 0.94
COPS7A-211ENST00000540408 NEO1Q92859 1461 aa20.91■□□□□ 0.94
COPS7A-211ENST00000540408 ARID4BQ4LE39 1312 aaPredicted RBP20.87■□□□□ 0.93
COPS7A-211ENST00000540408 NUP153P49790 1475 aaKnown RBP20.86■□□□□ 0.93
COPS7A-211ENST00000540408 FHOD3Q2V2M9 1422 aa20.85■□□□□ 0.93
COPS7A-211ENST00000540408 PTPRMP28827 1452 aa20.81■□□□□ 0.92
COPS7A-211ENST00000540408 DENND4BO75064 1496 aaPredicted RBP20.78■□□□□ 0.92
COPS7A-211ENST00000540408 ADAMTSL3P82987 1691 aa20.77■□□□□ 0.92
COPS7A-211ENST00000540408 AKNAQ7Z591 1439 aa20.77■□□□□ 0.91
COPS7A-211ENST00000540408 EFCAB5A4FU69 1503 aa20.75■□□□□ 0.91
COPS7A-211ENST00000540408 FANCAO15360 1455 aa20.75■□□□□ 0.91
COPS7A-211ENST00000540408 FRMPD1Q5SYB0 1578 aa20.72■□□□□ 0.91
COPS7A-211ENST00000540408 CFAP74Q9C0B2 1584 aa20.72■□□□□ 0.91
COPS7A-211ENST00000540408 BCORL1Q5H9F3 1711 aa20.72■□□□□ 0.91
COPS7A-211ENST00000540408 UBTFP17480 764 aaKnown RBP20.71■□□□□ 0.91
COPS7A-211ENST00000540408 ATP1B4Q9UN42 357 aaPredicted RBP20.71■□□□□ 0.91
COPS7A-211ENST00000540408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.71■□□□□ 0.91
COPS7A-211ENST00000540408 POGZQ7Z3K3 1410 aa20.7■□□□□ 0.9
COPS7A-211ENST00000540408 FBXO41Q8TF61 875 aa20.68■□□□□ 0.9
COPS7A-211ENST00000540408 MADDQ8WXG6 1647 aa20.67■□□□□ 0.9
COPS7A-211ENST00000540408 CDK11AQ9UQ88 783 aaPredicted RBP20.67■□□□□ 0.9
COPS7A-211ENST00000540408 ARHGEF40Q8TER5 1519 aa20.67■□□□□ 0.9
COPS7A-211ENST00000540408 RICTORQ6R327 1708 aa20.66■□□□□ 0.9
COPS7A-211ENST00000540408 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
COPS7A-211ENST00000540408 TTC37Q6PGP7 1564 aa20.63■□□□□ 0.89
COPS7A-211ENST00000540408 MAGI2Q86UL8 1455 aa20.63■□□□□ 0.89
COPS7A-211ENST00000540408 PLCH2O75038 1416 aa20.63■□□□□ 0.89
COPS7A-211ENST00000540408 FMN1Q68DA7 1419 aa20.63■□□□□ 0.89
COPS7A-211ENST00000540408 PLPPR3Q6T4P5 718 aa20.63■□□□□ 0.89
COPS7A-211ENST00000540408 PCF11O94913 1555 aaKnown RBP20.63■□□□□ 0.89
COPS7A-211ENST00000540408 CDK13Q14004 1512 aaKnown RBP20.63■□□□□ 0.89
COPS7A-211ENST00000540408 EFCAB2Q5VUJ9 269 aa20.62■□□□□ 0.89
COPS7A-211ENST00000540408 ZFYVE16Q7Z3T8 1539 aa20.62■□□□□ 0.89
COPS7A-211ENST00000540408 SCAPERQ9BY12 1400 aa20.61■□□□□ 0.89
COPS7A-211ENST00000540408 ZMYM4Q5VZL5 1548 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms