RNA–Protein interactions for RNA: ENST00000540288.5

PLCB3-204, Transcript of phospholipase C beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLCB3, Length 4,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLCB3-204ENST00000540288 CLSPNQ9HAW4 1339 aa24.23■■□□□ 1.47
PLCB3-204ENST00000540288 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
PLCB3-204ENST00000540288 CCNB3Q8WWL7 1395 aa24.22■■□□□ 1.47
PLCB3-204ENST00000540288 ATAD2BQ9ULI0 1458 aa24.21■■□□□ 1.47
PLCB3-204ENST00000540288 CHGAP10645 457 aaKnown RBP24.18■■□□□ 1.46
PLCB3-204ENST00000540288 SALL2Q9Y467 1007 aaPredicted RBP24.18■■□□□ 1.46
PLCB3-204ENST00000540288 KCNH8Q96L42 1107 aa24.16■■□□□ 1.46
PLCB3-204ENST00000540288 RAPGEF2Q9Y4G8 1499 aa24.12■■□□□ 1.45
PLCB3-204ENST00000540288 PLEKHD1A6NEE1 506 aa24.12■■□□□ 1.45
PLCB3-204ENST00000540288 TDRD9Q8NDG6 1382 aaKnown RBP24.11■■□□□ 1.45
PLCB3-204ENST00000540288 EIF4G2P78344 907 aaKnown RBP eCLIP24.11■■□□□ 1.45
PLCB3-204ENST00000540288 CFDP1Q9UEE9 299 aaPredicted RBP24.11■■□□□ 1.45
PLCB3-204ENST00000540288 MRS2Q9HD23 443 aa24.1■■□□□ 1.45
PLCB3-204ENST00000540288 FHAD1B1AJZ9 1412 aa24.06■■□□□ 1.44
PLCB3-204ENST00000540288 IRX6P78412 446 aaPredicted RBP24.05■■□□□ 1.44
PLCB3-204ENST00000540288 SENP3-EIF4A1A0A087X0R7 540 aa24.05■■□□□ 1.44
PLCB3-204ENST00000540288 NPM1P06748 294 aaKnown RBP eCLIP24.03■■□□□ 1.44
PLCB3-204ENST00000540288 RGL3Q3MIN7 710 aa24.02■■□□□ 1.44
PLCB3-204ENST00000540288 TMC1Q8TDI8 760 aa24.02■■□□□ 1.44
PLCB3-204ENST00000540288 EIF4G1Q04637 1599 aaKnown RBP24.01■■□□□ 1.43
PLCB3-204ENST00000540288 CADPSQ9ULU8 1353 aa24■■□□□ 1.43
PLCB3-204ENST00000540288 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
PLCB3-204ENST00000540288 RTL5Q5HYW3 569 aaPredicted RBP23.95■■□□□ 1.42
PLCB3-204ENST00000540288 SENP3Q9H4L4 574 aaPredicted RBP23.93■■□□□ 1.42
PLCB3-204ENST00000540288 CANXP27824 592 aaKnown RBP23.92■■□□□ 1.42
PLCB3-204ENST00000540288 BCL11AQ9H165 835 aa23.92■■□□□ 1.42
PLCB3-204ENST00000540288 RAB3GAP2Q9H2M9 1393 aa23.88■■□□□ 1.41
PLCB3-204ENST00000540288 SETD5Q9C0A6 1442 aa23.88■■□□□ 1.41
PLCB3-204ENST00000540288 FHOD3Q2V2M9 1422 aa23.86■■□□□ 1.41
PLCB3-204ENST00000540288 FOXD1Q16676 465 aa23.86■■□□□ 1.41
PLCB3-204ENST00000540288 PLPPR3Q6T4P5 718 aa23.83■■□□□ 1.41
PLCB3-204ENST00000540288 STAG3Q9UJ98 1225 aa23.83■■□□□ 1.41
PLCB3-204ENST00000540288 NPM2Q86SE8 214 aaKnown RBP23.82■■□□□ 1.4
PLCB3-204ENST00000540288 PDS5BQ9NTI5 1447 aa23.82■■□□□ 1.4
PLCB3-204ENST00000540288 ARHGAP35Q9NRY4 1499 aa23.81■■□□□ 1.4
PLCB3-204ENST00000540288 CARD11Q9BXL7 1154 aa23.77■■□□□ 1.4
PLCB3-204ENST00000540288 ESF1Q9H501 851 aaKnown RBP23.75■■□□□ 1.39
PLCB3-204ENST00000540288 CCDC136Q96JN2 1154 aa23.74■■□□□ 1.39
PLCB3-204ENST00000540288 SLC24A1O60721 1099 aa23.73■■□□□ 1.39
PLCB3-204ENST00000540288 SUPT16HQ9Y5B9 1047 aaKnown RBP23.72■■□□□ 1.39
PLCB3-204ENST00000540288 NEFMP07197 916 aa23.71■■□□□ 1.39
PLCB3-204ENST00000540288 FMN1Q68DA7 1419 aa23.71■■□□□ 1.39
PLCB3-204ENST00000540288 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
PLCB3-204ENST00000540288 ANP32AP39687 249 aaKnown RBP23.68■■□□□ 1.38
PLCB3-204ENST00000540288 WDR43Q15061 677 aaKnown RBP eCLIP23.67■■□□□ 1.38
PLCB3-204ENST00000540288 IGF1RP08069 1367 aa23.66■■□□□ 1.38
PLCB3-204ENST00000540288 TIMELESSQ9UNS1 1208 aa23.65■■□□□ 1.38
PLCB3-204ENST00000540288 DHX57Q6P158 1386 aaKnown RBP23.63■■□□□ 1.37
PLCB3-204ENST00000540288 DCAF11Q8TEB1 546 aa23.63■■□□□ 1.37
PLCB3-204ENST00000540288 HSPA5P11021 654 aaKnown RBP23.63■■□□□ 1.37
PLCB3-204ENST00000540288 PPP1R15AO75807 674 aaPredicted RBP23.61■■□□□ 1.37
PLCB3-204ENST00000540288 PKD2Q13563 968 aa23.61■■□□□ 1.37
PLCB3-204ENST00000540288 MPHOSPH9Q99550 1183 aa23.61■■□□□ 1.37
PLCB3-204ENST00000540288 FGD5Q6ZNL6 1462 aa23.58■■□□□ 1.37
PLCB3-204ENST00000540288 RAD54L2Q9Y4B4 1467 aa23.58■■□□□ 1.36
PLCB3-204ENST00000540288 ZBTB47Q9UFB7 747 aaPredicted RBP23.57■■□□□ 1.36
PLCB3-204ENST00000540288 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
PLCB3-204ENST00000540288 SYNJ1O43426 1573 aa23.53■■□□□ 1.36
PLCB3-204ENST00000540288 L3MBTL2Q969R5 705 aa23.5■■□□□ 1.35
PLCB3-204ENST00000540288 KIF21BO75037 1637 aa23.48■■□□□ 1.35
PLCB3-204ENST00000540288 CC2D1BQ5T0F9 858 aaKnown RBP23.47■■□□□ 1.35
PLCB3-204ENST00000540288 KNSTRNQ9Y448 316 aa23.47■■□□□ 1.35
PLCB3-204ENST00000540288 CARMIL2Q6F5E8 1435 aa23.47■■□□□ 1.35
PLCB3-204ENST00000540288 JPH4Q96JJ6 628 aa23.46■■□□□ 1.35
PLCB3-204ENST00000540288 HNRNPMP52272 730 aaKnown RBP eCLIP23.43■■□□□ 1.34
PLCB3-204ENST00000540288 NUP155O75694 1391 aa23.43■■□□□ 1.34
PLCB3-204ENST00000540288 CCER2I3L3R5 266 aa23.41■■□□□ 1.34
PLCB3-204ENST00000540288 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.4■■□□□ 1.34
PLCB3-204ENST00000540288 ARAP1Q96P48 1450 aa23.39■■□□□ 1.33
PLCB3-204ENST00000540288 TNNT2P45379 298 aaPredicted RBP23.37■■□□□ 1.33
PLCB3-204ENST00000540288 PHLDB1Q86UU1 1377 aa23.37■■□□□ 1.33
PLCB3-204ENST00000540288 NEUROD2Q15784 382 aa23.37■■□□□ 1.33
PLCB3-204ENST00000540288 NBR1Q14596 966 aa23.37■■□□□ 1.33
PLCB3-204ENST00000540288 B4GALNT3Q6L9W6 998 aa23.36■■□□□ 1.33
PLCB3-204ENST00000540288 GAPVD1Q14C86 1478 aa23.35■■□□□ 1.33
PLCB3-204ENST00000540288 CFTRP13569 1480 aa23.34■■□□□ 1.33
PLCB3-204ENST00000540288 CDCA8Q53HL2 280 aa23.34■■□□□ 1.33
PLCB3-204ENST00000540288 ANKRD30AQ9BXX3 1397 aa23.32■■□□□ 1.32
PLCB3-204ENST00000540288 NESP48681 1621 aa23.31■■□□□ 1.32
PLCB3-204ENST00000540288 GGT6Q6P531 493 aa23.29■■□□□ 1.32
PLCB3-204ENST00000540288 CCDC18Q5T9S5 1454 aa23.29■■□□□ 1.32
PLCB3-204ENST00000540288 PLEKHG5O94827 1062 aa23.28■■□□□ 1.32
PLCB3-204ENST00000540288 PPM1GO15355 546 aaPredicted RBP23.28■■□□□ 1.32
PLCB3-204ENST00000540288 TMF1P82094 1093 aa23.28■■□□□ 1.32
PLCB3-204ENST00000540288 ZNF644Q9H582 1327 aaPredicted RBP23.28■■□□□ 1.32
PLCB3-204ENST00000540288 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.321e-6■■■■■ 32
PLCB3-204ENST00000540288 PPP4R2Q9NY27 417 aa23.26■■□□□ 1.31
PLCB3-204ENST00000540288 EFCAB2Q5VUJ9 269 aa23.25■■□□□ 1.31
PLCB3-204ENST00000540288 PRXQ9BXM0 1461 aa23.24■■□□□ 1.31
PLCB3-204ENST00000540288 CUX1P39880 1505 aa23.23■■□□□ 1.31
PLCB3-204ENST00000540288 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
PLCB3-204ENST00000540288 SAFB2Q14151 953 aaKnown RBP eCLIP23.22■■□□□ 1.31
PLCB3-204ENST00000540288 ARID4BQ4LE39 1312 aaPredicted RBP23.22■■□□□ 1.31
PLCB3-204ENST00000540288 LRRC9Q6ZRR7 1453 aa23.21■■□□□ 1.31
PLCB3-204ENST00000540288 UPF2Q9HAU5 1272 aaKnown RBP23.2■■□□□ 1.3
PLCB3-204ENST00000540288 ROCK2O75116 1388 aaKnown RBP23.19■■□□□ 1.3
PLCB3-204ENST00000540288 FGD6Q6ZV73 1430 aa23.19■■□□□ 1.3
PLCB3-204ENST00000540288 MLECQ14165 292 aa23.18■■□□□ 1.3
PLCB3-204ENST00000540288 CFAP53Q96M91 514 aa23.17■■□□□ 1.3
PLCB3-204ENST00000540288 POGKQ9P215 609 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms