RNA–Protein interactions for RNA: ENST00000540288.5

PLCB3-204, Transcript of phospholipase C beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLCB3, Length 4,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLCB3-204ENST00000540288 NISCHQ9Y2I1 1504 aa32.09■■■□□ 2.73
PLCB3-204ENST00000540288 DCAF8L2P0C7V8 631 aa31.38■■■□□ 2.61
PLCB3-204ENST00000540288 SUPT5HO00267 1087 aaKnown RBP30.23■■■□□ 2.43
PLCB3-204ENST00000540288 SHROOM4Q9ULL8 1493 aa30.15■■■□□ 2.42
PLCB3-204ENST00000540288 EHMT2Q96KQ7 1210 aa28.9■■■□□ 2.22
PLCB3-204ENST00000540288 FAM9AQ8IZU1 332 aaPredicted RBP28.39■■■□□ 2.13
PLCB3-204ENST00000540288 PCGF6Q9BYE7 350 aa28.08■■■□□ 2.09
PLCB3-204ENST00000540288 TRIM41Q8WV44 630 aa27.88■■■□□ 2.05
PLCB3-204ENST00000540288 TTBK1Q5TCY1 1321 aaPredicted RBP27.85■■■□□ 2.05
PLCB3-204ENST00000540288 RANGAP1P46060 587 aaPredicted RBP27.53■■■□□ 2
PLCB3-204ENST00000540288 CHIC1Q5VXU3 224 aa27.53■■■□□ 2
PLCB3-204ENST00000540288 APLP2Q06481 763 aa27.52■■■□□ 2
PLCB3-204ENST00000540288 LOC105371045A0A1W2PR82 267 aa27.41■■□□□ 1.98
PLCB3-204ENST00000540288 PPARGC1BQ86YN6 1023 aaKnown RBP27.32■■□□□ 1.96
PLCB3-204ENST00000540288 UBTFP17480 764 aaKnown RBP27.27■■□□□ 1.96
PLCB3-204ENST00000540288 ABCC9O60706 1549 aa27.14■■□□□ 1.94
PLCB3-204ENST00000540288 CCER1Q8TC90 406 aaPredicted RBP27.09■■□□□ 1.93
PLCB3-204ENST00000540288 TRIM26Q12899 539 aaPredicted RBP26.92■■□□□ 1.9
PLCB3-204ENST00000540288 ATP1B4Q9UN42 357 aaPredicted RBP26.9■■□□□ 1.9
PLCB3-204ENST00000540288 ZEB1P37275 1124 aaPredicted RBP26.9■■□□□ 1.9
PLCB3-204ENST00000540288 PABPN1Q86U42 306 aaKnown RBP eCLIP26.83■■□□□ 1.894e-9■■■□□ 17.7
PLCB3-204ENST00000540288 HRCP23327 699 aa26.82■■□□□ 1.88
PLCB3-204ENST00000540288 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
PLCB3-204ENST00000540288 HNRNPUL2Q1KMD3 747 aaKnown RBP26.4■■□□□ 1.82
PLCB3-204ENST00000540288 ITGAEP38570 1179 aa26.37■■□□□ 1.81
PLCB3-204ENST00000540288 CENPBP07199 599 aaPredicted RBP26.36■■□□□ 1.81
PLCB3-204ENST00000540288 YTHDC1Q96MU7 727 aaKnown RBP26.33■■□□□ 1.8
PLCB3-204ENST00000540288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.32■■□□□ 1.8
PLCB3-204ENST00000540288 SCRIBQ14160 1630 aa26.3■■□□□ 1.8
PLCB3-204ENST00000540288 CCDC180Q9P1Z9 1646 aa26.27■■□□□ 1.8
PLCB3-204ENST00000540288 PELP1Q8IZL8 1130 aaKnown RBP26.23■■□□□ 1.79
PLCB3-204ENST00000540288 CSRNP3Q8WYN3 585 aa25.89■■□□□ 1.74
PLCB3-204ENST00000540288 MYO15BQ96JP2 1530 aa25.86■■□□□ 1.73
PLCB3-204ENST00000540288 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
PLCB3-204ENST00000540288 DIEXFQ68CQ4 756 aaKnown RBP25.74■■□□□ 1.71
PLCB3-204ENST00000540288 FAM50AQ14320 339 aaKnown RBP25.71■■□□□ 1.71
PLCB3-204ENST00000540288 P3H3Q8IVL6 736 aa25.6■■□□□ 1.69
PLCB3-204ENST00000540288 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
PLCB3-204ENST00000540288 POLR3GLQ9BT43 218 aa25.55■■□□□ 1.68
PLCB3-204ENST00000540288 NEFLP07196 543 aa25.54■■□□□ 1.68
PLCB3-204ENST00000540288 CNGB1Q14028 1251 aaPredicted RBP25.53■■□□□ 1.68
PLCB3-204ENST00000540288 NEUROD1Q13562 356 aa25.49■■□□□ 1.67
PLCB3-204ENST00000540288 CECR2Q9BXF3 1484 aa25.4■■□□□ 1.66
PLCB3-204ENST00000540288 MYT1LQ9UL68 1186 aa25.39■■□□□ 1.65
PLCB3-204ENST00000540288 RB1CC1Q8TDY2 1594 aa25.38■■□□□ 1.65
PLCB3-204ENST00000540288 ARID3CA6NKF2 412 aa25.37■■□□□ 1.65
PLCB3-204ENST00000540288 TRIM52Q96A61 297 aa25.33■■□□□ 1.65
PLCB3-204ENST00000540288 NACADO15069 1562 aa25.33■■□□□ 1.65
PLCB3-204ENST00000540288 FBLN2P98095 1184 aa25.32■■□□□ 1.64
PLCB3-204ENST00000540288 ZNF316A6NFI3 1004 aaPredicted RBP25.27■■□□□ 1.64
PLCB3-204ENST00000540288 ERICH6Q7L0X2 663 aa25.23■■□□□ 1.63
PLCB3-204ENST00000540288 GTF3C3Q9Y5Q9 886 aa25.14■■□□□ 1.62
PLCB3-204ENST00000540288 ZNF326Q5BKZ1 582 aaKnown RBP25.04■■□□□ 1.6
PLCB3-204ENST00000540288 CLIP1P30622 1438 aa25.03■■□□□ 1.6
PLCB3-204ENST00000540288 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
PLCB3-204ENST00000540288 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
PLCB3-204ENST00000540288 CEP162Q5TB80 1403 aa25.03■■□□□ 1.6
PLCB3-204ENST00000540288 BAZ1AQ9NRL2 1556 aaPredicted RBP24.99■■□□□ 1.59
PLCB3-204ENST00000540288 BAZ1BQ9UIG0 1483 aaKnown RBP24.95■■□□□ 1.58
PLCB3-204ENST00000540288 ACIN1Q9UKV3 1341 aaKnown RBP24.91■■□□□ 1.58
PLCB3-204ENST00000540288 ZNF777Q9ULD5 760 aaPredicted RBP24.9■■□□□ 1.58
PLCB3-204ENST00000540288 BCANQ96GW7 911 aa24.9■■□□□ 1.58
PLCB3-204ENST00000540288 GOLGA3Q08378 1498 aa24.87■■□□□ 1.57
PLCB3-204ENST00000540288 SOGA1O94964 1423 aa24.86■■□□□ 1.57
PLCB3-204ENST00000540288 ANP32CO43423 234 aa24.86■■□□□ 1.57
PLCB3-204ENST00000540288 EEA1Q15075 1411 aa24.85■■□□□ 1.57
PLCB3-204ENST00000540288 TNIKQ9UKE5 1360 aa24.81■■□□□ 1.56
PLCB3-204ENST00000540288 CHIC2Q9UKJ5 165 aa24.79■■□□□ 1.56
PLCB3-204ENST00000540288 SLC4A1APQ9BWU0 796 aaKnown RBP24.76■■□□□ 1.55
PLCB3-204ENST00000540288 CCDC88BA6NC98 1476 aa24.75■■□□□ 1.55
PLCB3-204ENST00000540288 ABCC8Q09428 1581 aa24.74■■□□□ 1.55
PLCB3-204ENST00000540288 DDX10Q13206 875 aaKnown RBP24.7■■□□□ 1.54
PLCB3-204ENST00000540288 CDK11AQ9UQ88 783 aaPredicted RBP24.68■■□□□ 1.54
PLCB3-204ENST00000540288 WIZO95785 1651 aa24.68■■□□□ 1.54
PLCB3-204ENST00000540288 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
PLCB3-204ENST00000540288 HIRIP3Q9BW71 556 aaPredicted RBP24.64■■□□□ 1.53
PLCB3-204ENST00000540288 TONSLQ96HA7 1378 aa24.64■■□□□ 1.53
PLCB3-204ENST00000540288 MTUS2Q5JR59 1369 aa24.63■■□□□ 1.53
PLCB3-204ENST00000540288 MIER1Q8N108 512 aa24.63■■□□□ 1.53
PLCB3-204ENST00000540288 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
PLCB3-204ENST00000540288 RRP7BPQ9NSQ0 103 aa24.5■■□□□ 1.51
PLCB3-204ENST00000540288 SCAF1Q9H7N4 1312 aaKnown RBP24.48■■□□□ 1.51
PLCB3-204ENST00000540288 CHMP7Q8WUX9 453 aaPredicted RBP24.48■■□□□ 1.51
PLCB3-204ENST00000540288 CUX2O14529 1486 aa24.38■■□□□ 1.49
PLCB3-204ENST00000540288 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
PLCB3-204ENST00000540288 KANK4Q5T7N3 995 aaPredicted RBP24.35■■□□□ 1.49
PLCB3-204ENST00000540288 HNRNPUQ00839 825 aaKnown RBP eCLIP24.34■■□□□ 1.49
PLCB3-204ENST00000540288 CARMIL1Q5VZK9 1371 aa24.34■■□□□ 1.49
PLCB3-204ENST00000540288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.34■■□□□ 1.49
PLCB3-204ENST00000540288 DAXXQ9UER7 740 aaPredicted RBP24.34■■□□□ 1.49
PLCB3-204ENST00000540288 SIN3AQ96ST3 1273 aa24.33■■□□□ 1.48
PLCB3-204ENST00000540288 FKBP8Q14318 412 aa24.32■■□□□ 1.48
PLCB3-204ENST00000540288 MYT1Q01538 1121 aa24.32■■□□□ 1.48
PLCB3-204ENST00000540288 FAM9BQ8IZU0 186 aa24.31■■□□□ 1.48
PLCB3-204ENST00000540288 RUSC2Q8N2Y8 1516 aa24.3■■□□□ 1.48
PLCB3-204ENST00000540288 KDM2AQ9Y2K7 1162 aa24.28■■□□□ 1.48
PLCB3-204ENST00000540288 VPS8Q8N3P4 1428 aa24.27■■□□□ 1.48
PLCB3-204ENST00000540288 TSPY4P0CV99 314 aa24.27■■□□□ 1.48
PLCB3-204ENST00000540288 TSPY10P0CW01 314 aa24.27■■□□□ 1.48
PLCB3-204ENST00000540288 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 519.8 ms