RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 GOLGA3Q08378 1498 aa30.27■■■□□ 2.44
NEK2-205ENST00000540251 SHROOM2Q13796 1616 aa30.24■■■□□ 2.43
NEK2-205ENST00000540251 IQGAP2Q13576 1575 aa30.19■■■□□ 2.42
NEK2-205ENST00000540251 DNAJC5Q9H3Z4 198 aa30.13■■■□□ 2.41
NEK2-205ENST00000540251 JPH4Q96JJ6 628 aa30.12■■■□□ 2.41
NEK2-205ENST00000540251 UGGT2Q9NYU1 1516 aa30.1■■■□□ 2.41
NEK2-205ENST00000540251 TNIKQ9UKE5 1360 aa30.03■■■□□ 2.4
NEK2-205ENST00000540251 UBTFP17480 764 aaKnown RBP30.02■■■□□ 2.4
NEK2-205ENST00000540251 ARHGEF11O15085 1522 aa30■■■□□ 2.39
NEK2-205ENST00000540251 PRG4Q92954 1404 aaPredicted RBP29.99■■■□□ 2.39
NEK2-205ENST00000540251 DISP1Q96F81 1524 aa29.95■■■□□ 2.39
NEK2-205ENST00000540251 RIMBP3CA6NJZ7 1639 aa29.95■■■□□ 2.39
NEK2-205ENST00000540251 RIMBP3BA6NNM3 1639 aa29.95■■■□□ 2.39
NEK2-205ENST00000540251 RIMBP3Q9UFD9 1639 aa29.95■■■□□ 2.39
NEK2-205ENST00000540251 ERCC6L2Q5T890 1561 aa29.94■■■□□ 2.38
NEK2-205ENST00000540251 SAMD9Q5K651 1589 aa29.93■■■□□ 2.38
NEK2-205ENST00000540251 CARMIL2Q6F5E8 1435 aa29.92■■■□□ 2.38
NEK2-205ENST00000540251 KIAA0556O60303 1618 aa29.9■■■□□ 2.38
NEK2-205ENST00000540251 LOC105371045A0A1W2PR82 267 aa29.89■■■□□ 2.38
NEK2-205ENST00000540251 EFCAB5A4FU69 1503 aa29.88■■■□□ 2.37
NEK2-205ENST00000540251 EHMT2Q96KQ7 1210 aa29.88■■■□□ 2.37
NEK2-205ENST00000540251 ARAP1Q96P48 1450 aa29.79■■■□□ 2.36
NEK2-205ENST00000540251 ARHGAP35Q9NRY4 1499 aa29.76■■■□□ 2.35
NEK2-205ENST00000540251 PTPRGP23470 1445 aa29.7■■■□□ 2.35
NEK2-205ENST00000540251 CLIP1P30622 1438 aa29.7■■■□□ 2.35
NEK2-205ENST00000540251 CEP162Q5TB80 1403 aa29.7■■■□□ 2.34
NEK2-205ENST00000540251 FHOD3Q2V2M9 1422 aa29.62■■■□□ 2.33
NEK2-205ENST00000540251 RANGAP1P46060 587 aaPredicted RBP29.61■■■□□ 2.33
NEK2-205ENST00000540251 P3H3Q8IVL6 736 aa29.6■■■□□ 2.33
NEK2-205ENST00000540251 CYB5RLQ6IPT4 315 aa29.59■■■□□ 2.33
NEK2-205ENST00000540251 UHRF1BP1LA0JNW5 1464 aa29.58■■■□□ 2.33
NEK2-205ENST00000540251 ABCA8O94911 1581 aa29.58■■■□□ 2.33
NEK2-205ENST00000540251 FMN1Q68DA7 1419 aa29.56■■■□□ 2.32
NEK2-205ENST00000540251 UACAQ9BZF9 1416 aa29.55■■■□□ 2.32
NEK2-205ENST00000540251 ADCY10Q96PN6 1610 aa29.51■■■□□ 2.32
NEK2-205ENST00000540251 ABCC2Q92887 1545 aa29.51■■■□□ 2.31
NEK2-205ENST00000540251 PLB1Q6P1J6 1458 aa29.5■■■□□ 2.31
NEK2-205ENST00000540251 RAPGEF6Q8TEU7 1601 aa29.49■■■□□ 2.31
NEK2-205ENST00000540251 KDM5BQ9UGL1 1544 aa29.41■■■□□ 2.3
NEK2-205ENST00000540251 TTBK1Q5TCY1 1321 aaPredicted RBP29.4■■■□□ 2.3
NEK2-205ENST00000540251 CASKIN1Q8WXD9 1431 aa29.39■■■□□ 2.3
NEK2-205ENST00000540251 NUP153P49790 1475 aaKnown RBP29.37■■■□□ 2.29
NEK2-205ENST00000540251 VPS8Q8N3P4 1428 aa29.35■■■□□ 2.29
NEK2-205ENST00000540251 HECW1Q76N89 1606 aa29.35■■■□□ 2.29
NEK2-205ENST00000540251 FYCO1Q9BQS8 1478 aa29.35■■■□□ 2.29
NEK2-205ENST00000540251 PCF11O94913 1555 aaKnown RBP29.34■■■□□ 2.29
NEK2-205ENST00000540251 ZCCHC11Q5TAX3 1644 aaKnown RBP29.31■■■□□ 2.28
NEK2-205ENST00000540251 ATP10BO94823 1461 aa29.3■■■□□ 2.28
NEK2-205ENST00000540251 LRRIQ1Q96JM4 1722 aa29.29■■■□□ 2.28
NEK2-205ENST00000540251 MAPKBP1O60336 1514 aa29.28■■■□□ 2.28
NEK2-205ENST00000540251 NPM1P06748 294 aaKnown RBP eCLIP29.26■■■□□ 2.27
NEK2-205ENST00000540251 EPRSP07814 1512 aaKnown RBP29.25■■■□□ 2.27
NEK2-205ENST00000540251 CCDC18Q5T9S5 1454 aa29.22■■■□□ 2.27
NEK2-205ENST00000540251 MAP3K1Q13233 1512 aa29.16■■■□□ 2.26
NEK2-205ENST00000540251 CDK13Q14004 1512 aaKnown RBP29.15■■■□□ 2.26
NEK2-205ENST00000540251 ASXL2Q76L83 1435 aa29.14■■■□□ 2.25
NEK2-205ENST00000540251 ATP1B4Q9UN42 357 aaPredicted RBP29.09■■■□□ 2.25
NEK2-205ENST00000540251 WDR7Q9Y4E6 1490 aa29.09■■■□□ 2.25
NEK2-205ENST00000540251 CFAP43Q8NDM7 1665 aa29.09■■■□□ 2.25
NEK2-205ENST00000540251 CDK11AQ9UQ88 783 aaPredicted RBP29.06■■■□□ 2.24
NEK2-205ENST00000540251 TIAM1Q13009 1591 aa29.05■■■□□ 2.24
NEK2-205ENST00000540251 PLEKHD1A6NEE1 506 aa29.04■■■□□ 2.24
NEK2-205ENST00000540251 ABCC10Q5T3U5 1492 aa29.04■■■□□ 2.24
NEK2-205ENST00000540251 ARID3CA6NKF2 412 aa29.03■■■□□ 2.24
NEK2-205ENST00000540251 GLI2P10070 1586 aa29.02■■■□□ 2.24
NEK2-205ENST00000540251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29■■■□□ 2.23
NEK2-205ENST00000540251 HNRNPUL2Q1KMD3 747 aaKnown RBP29■■■□□ 2.23
NEK2-205ENST00000540251 KIF13AQ9H1H9 1805 aa29■■■□□ 2.23
NEK2-205ENST00000540251 DIP2BQ9P265 1576 aa29■■■□□ 2.23
NEK2-205ENST00000540251 TROQ12816 1431 aaPredicted RBP29■■■□□ 2.23
NEK2-205ENST00000540251 MAGI3Q5TCQ9 1506 aa28.99■■■□□ 2.23
NEK2-205ENST00000540251 EHBP1L1Q8N3D4 1523 aa28.92■■■□□ 2.22
NEK2-205ENST00000540251 ABCA9Q8IUA7 1624 aa28.92■■■□□ 2.22
NEK2-205ENST00000540251 LRRC9Q6ZRR7 1453 aa28.91■■■□□ 2.22
NEK2-205ENST00000540251 KIF14Q15058 1648 aa28.88■■■□□ 2.21
NEK2-205ENST00000540251 MAP3K4Q9Y6R4 1608 aa28.88■■■□□ 2.21
NEK2-205ENST00000540251 APLP2Q06481 763 aa28.88■■■□□ 2.21
NEK2-205ENST00000540251 MTUS2Q5JR59 1369 aa28.87■■■□□ 2.21
NEK2-205ENST00000540251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.86■■■□□ 2.212e-8■■□□□ 12.7
NEK2-205ENST00000540251 FAM69CQ0P6D2 419 aa28.84■■■□□ 2.21
NEK2-205ENST00000540251 KCNH8Q96L42 1107 aa28.84■■■□□ 2.21
NEK2-205ENST00000540251 KANK4Q5T7N3 995 aaPredicted RBP28.82■■■□□ 2.2
NEK2-205ENST00000540251 SUPT6HQ7KZ85 1726 aaKnown RBP28.81■■■□□ 2.2
NEK2-205ENST00000540251 TTC37Q6PGP7 1564 aa28.78■■■□□ 2.2
NEK2-205ENST00000540251 ARAP3Q8WWN8 1544 aa28.76■■■□□ 2.19
NEK2-205ENST00000540251 PPRC1Q5VV67 1664 aaKnown RBP28.75■■■□□ 2.19
NEK2-205ENST00000540251 CD109Q6YHK3 1445 aa28.75■■■□□ 2.19
NEK2-205ENST00000540251 MYO5CQ9NQX4 1742 aa28.74■■■□□ 2.19
NEK2-205ENST00000540251 TRHP20396 242 aaPredicted RBP28.73■■■□□ 2.19
NEK2-205ENST00000540251 NCOA2Q15596 1464 aa28.72■■■□□ 2.19
NEK2-205ENST00000540251 CDC42BPAQ5VT25 1732 aa28.72■■■□□ 2.19
NEK2-205ENST00000540251 PLCH2O75038 1416 aa28.7■■■□□ 2.19
NEK2-205ENST00000540251 CDC42BPBQ9Y5S2 1711 aa28.68■■■□□ 2.18
NEK2-205ENST00000540251 PREX2Q70Z35 1606 aa28.68■■■□□ 2.18
NEK2-205ENST00000540251 TSPOAP1O95153 1857 aa28.68■■■□□ 2.18
NEK2-205ENST00000540251 GPATCH8Q9UKJ3 1502 aaKnown RBP28.67■■■□□ 2.18
NEK2-205ENST00000540251 ITSN2Q9NZM3 1697 aa28.65■■■□□ 2.18
NEK2-205ENST00000540251 TEX14Q8IWB6 1497 aa28.65■■■□□ 2.18
NEK2-205ENST00000540251 CCNB3Q8WWL7 1395 aa28.62■■■□□ 2.17
NEK2-205ENST00000540251 PHLDB1Q86UU1 1377 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms