RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ABCA5Q8WWZ7 1642 aa19.52■□□□□ 0.72
DDX55-206ENST00000539934 CENPBP07199 599 aaPredicted RBP19.52■□□□□ 0.71
DDX55-206ENST00000539934 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
DDX55-206ENST00000539934 CEP170Q5SW79 1584 aa19.51■□□□□ 0.71
DDX55-206ENST00000539934 NUP160Q12769 1436 aa19.43■□□□□ 0.7
DDX55-206ENST00000539934 KIF13AQ9H1H9 1805 aa19.43■□□□□ 0.7
DDX55-206ENST00000539934 ADAMTS12P58397 1594 aa19.42■□□□□ 0.7
DDX55-206ENST00000539934 FAM69CQ0P6D2 419 aa19.41■□□□□ 0.7
DDX55-206ENST00000539934 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
DDX55-206ENST00000539934 PRG4Q92954 1404 aaPredicted RBP19.39■□□□□ 0.69
DDX55-206ENST00000539934 LOC105371045A0A1W2PR82 267 aa19.37■□□□□ 0.69
DDX55-206ENST00000539934 JPH4Q96JJ6 628 aa19.36■□□□□ 0.69
DDX55-206ENST00000539934 FHAD1B1AJZ9 1412 aa19.36■□□□□ 0.69
DDX55-206ENST00000539934 SHROOM2Q13796 1616 aa19.35■□□□□ 0.69
DDX55-206ENST00000539934 KDM4FA0A1W2PPD8 638 aa19.31■□□□□ 0.68
DDX55-206ENST00000539934 NPM1P06748 294 aaKnown RBP eCLIP19.29■□□□□ 0.68
DDX55-206ENST00000539934 ABCC10Q5T3U5 1492 aa19.25■□□□□ 0.67
DDX55-206ENST00000539934 NCBP3Q53F19 620 aaKnown RBP19.25■□□□□ 0.67
DDX55-206ENST00000539934 TOP2BQ02880 1626 aa19.25■□□□□ 0.67
DDX55-206ENST00000539934 TSPOAP1O95153 1857 aa19.25■□□□□ 0.67
DDX55-206ENST00000539934 ILDR1Q86SU0 546 aaPredicted RBP19.24■□□□□ 0.67
DDX55-206ENST00000539934 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
DDX55-206ENST00000539934 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
DDX55-206ENST00000539934 DIP2BQ9P265 1576 aa19.2■□□□□ 0.66
DDX55-206ENST00000539934 ADCY10Q96PN6 1610 aa19.19■□□□□ 0.66
DDX55-206ENST00000539934 KDM6BO15054 1643 aa19.18■□□□□ 0.66
DDX55-206ENST00000539934 RUSC2Q8N2Y8 1516 aa19.17■□□□□ 0.66
DDX55-206ENST00000539934 UBE2Q2Q8WVN8 375 aa19.15■□□□□ 0.66
DDX55-206ENST00000539934 MAPKBP1O60336 1514 aa19.14■□□□□ 0.65
DDX55-206ENST00000539934 EHMT2Q96KQ7 1210 aa19.11■□□□□ 0.65
DDX55-206ENST00000539934 PLEKHG5O94827 1062 aa19.09■□□□□ 0.65
DDX55-206ENST00000539934 EEA1Q15075 1411 aa19.06■□□□□ 0.64
DDX55-206ENST00000539934 ANP32EQ9BTT0 268 aa19.05■□□□□ 0.64
DDX55-206ENST00000539934 PTPRGP23470 1445 aa19.01■□□□□ 0.63
DDX55-206ENST00000539934 KIAA0586Q9BVV6 1533 aa19.01■□□□□ 0.63
DDX55-206ENST00000539934 IGF1RP08069 1367 aa19.01■□□□□ 0.63
DDX55-206ENST00000539934 PPARGC1BQ86YN6 1023 aaKnown RBP19■□□□□ 0.63
DDX55-206ENST00000539934 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
DDX55-206ENST00000539934 ADGRL1O94910 1474 aa18.97■□□□□ 0.63
DDX55-206ENST00000539934 ASXL2Q76L83 1435 aa18.96■□□□□ 0.62
DDX55-206ENST00000539934 COL17A1Q9UMD9 1497 aaPredicted RBP18.94■□□□□ 0.62
DDX55-206ENST00000539934 ARXQ96QS3 562 aa18.92■□□□□ 0.62
DDX55-206ENST00000539934 ACIN1Q9UKV3 1341 aaKnown RBP18.91■□□□□ 0.62
DDX55-206ENST00000539934 PPRC1Q5VV67 1664 aaKnown RBP18.91■□□□□ 0.62
DDX55-206ENST00000539934 ABCC2Q92887 1545 aa18.91■□□□□ 0.62
DDX55-206ENST00000539934 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
DDX55-206ENST00000539934 TNIKQ9UKE5 1360 aa18.89■□□□□ 0.61
DDX55-206ENST00000539934 CUL7Q14999 1698 aa18.88■□□□□ 0.61
DDX55-206ENST00000539934 PODXL2Q9NZ53 605 aa18.88■□□□□ 0.61
DDX55-206ENST00000539934 CARMIL1Q5VZK9 1371 aa18.87■□□□□ 0.61
DDX55-206ENST00000539934 CARMIL2Q6F5E8 1435 aa18.85■□□□□ 0.61
DDX55-206ENST00000539934 HECW2Q9P2P5 1572 aa18.85■□□□□ 0.61
DDX55-206ENST00000539934 GOLGA3Q08378 1498 aa18.84■□□□□ 0.61
DDX55-206ENST00000539934 PLB1Q6P1J6 1458 aa18.84■□□□□ 0.61
DDX55-206ENST00000539934 KIF21BO75037 1637 aa18.83■□□□□ 0.6
DDX55-206ENST00000539934 UACAQ9BZF9 1416 aa18.81■□□□□ 0.6
DDX55-206ENST00000539934 UBTFP17480 764 aaKnown RBP18.8■□□□□ 0.6
DDX55-206ENST00000539934 EPRSP07814 1512 aaKnown RBP18.79■□□□□ 0.6
DDX55-206ENST00000539934 GLI2P10070 1586 aa18.79■□□□□ 0.6
DDX55-206ENST00000539934 IQGAP2Q13576 1575 aa18.78■□□□□ 0.6
DDX55-206ENST00000539934 DISP1Q96F81 1524 aa18.78■□□□□ 0.6
DDX55-206ENST00000539934 RANGAP1P46060 587 aaPredicted RBP18.76■□□□□ 0.59
DDX55-206ENST00000539934 KCNH8Q96L42 1107 aa18.76■□□□□ 0.59
DDX55-206ENST00000539934 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
DDX55-206ENST00000539934 PCGF6Q9BYE7 350 aa18.74■□□□□ 0.59
DDX55-206ENST00000539934 MAP3K4Q9Y6R4 1608 aa18.74■□□□□ 0.59
DDX55-206ENST00000539934 UHRF1BP1LA0JNW5 1464 aa18.73■□□□□ 0.59
DDX55-206ENST00000539934 ZCCHC11Q5TAX3 1644 aaKnown RBP18.73■□□□□ 0.59
DDX55-206ENST00000539934 ARID3CA6NKF2 412 aa18.72■□□□□ 0.59
DDX55-206ENST00000539934 KDM5BQ9UGL1 1544 aa18.71■□□□□ 0.59
DDX55-206ENST00000539934 TEX14Q8IWB6 1497 aa18.69■□□□□ 0.58
DDX55-206ENST00000539934 RAPGEF2Q9Y4G8 1499 aa18.69■□□□□ 0.58
DDX55-206ENST00000539934 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
DDX55-206ENST00000539934 ANO8Q9HCE9 1232 aaPredicted RBP18.66■□□□□ 0.58
DDX55-206ENST00000539934 WDR7Q9Y4E6 1490 aa18.64■□□□□ 0.58
DDX55-206ENST00000539934 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.57
DDX55-206ENST00000539934 PRXQ9BXM0 1461 aa18.64■□□□□ 0.57
DDX55-206ENST00000539934 PKNOX2Q96KN3 472 aa18.64■□□□□ 0.57
DDX55-206ENST00000539934 CD109Q6YHK3 1445 aa18.63■□□□□ 0.57
DDX55-206ENST00000539934 KIAA0556O60303 1618 aa18.62■□□□□ 0.57
DDX55-206ENST00000539934 UGGT2Q9NYU1 1516 aa18.6■□□□□ 0.57
DDX55-206ENST00000539934 FBXO41Q8TF61 875 aa18.57■□□□□ 0.56
DDX55-206ENST00000539934 NEUROD1Q13562 356 aa18.56■□□□□ 0.56
DDX55-206ENST00000539934 P3H3Q8IVL6 736 aa18.56■□□□□ 0.56
DDX55-206ENST00000539934 CLIP1P30622 1438 aa18.56■□□□□ 0.56
DDX55-206ENST00000539934 KLHL34Q8N239 644 aa18.55■□□□□ 0.56
DDX55-206ENST00000539934 PLPPR3Q6T4P5 718 aa18.54■□□□□ 0.56
DDX55-206ENST00000539934 RAPGEF3O95398 923 aa18.53■□□□□ 0.56
DDX55-206ENST00000539934 MAGI3Q5TCQ9 1506 aa18.51■□□□□ 0.55
DDX55-206ENST00000539934 CFAP43Q8NDM7 1665 aa18.49■□□□□ 0.55
DDX55-206ENST00000539934 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
DDX55-206ENST00000539934 ARID4BQ4LE39 1312 aaPredicted RBP18.48■□□□□ 0.55
DDX55-206ENST00000539934 ABCA8O94911 1581 aa18.46■□□□□ 0.55
DDX55-206ENST00000539934 PTPRMP28827 1452 aa18.46■□□□□ 0.55
DDX55-206ENST00000539934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.43■□□□□ 0.54
DDX55-206ENST00000539934 HNRNPUL2Q1KMD3 747 aaKnown RBP18.43■□□□□ 0.54
DDX55-206ENST00000539934 RTN4Q9NQC3 1192 aaKnown RBP18.43■□□□□ 0.54
DDX55-206ENST00000539934 CTTNBP2Q8WZ74 1663 aa18.42■□□□□ 0.54
DDX55-206ENST00000539934 HSPA2P54652 639 aa18.42■□□□□ 0.54
DDX55-206ENST00000539934 VPS8Q8N3P4 1428 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms