RNA–Protein interactions for RNA: ENST00000539743.5

CPT1A-205, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CPT1A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-205ENST00000539743 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
CPT1A-205ENST00000539743 PRDM2Q13029 1718 aa17.47■□□□□ 0.39
CPT1A-205ENST00000539743 PRXQ9BXM0 1461 aa17.47■□□□□ 0.39
CPT1A-205ENST00000539743 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
CPT1A-205ENST00000539743 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
CPT1A-205ENST00000539743 KIF27Q86VH2 1401 aa17.44■□□□□ 0.38
CPT1A-205ENST00000539743 TRIM52Q96A61 297 aa17.43■□□□□ 0.38
CPT1A-205ENST00000539743 DDX10Q13206 875 aaKnown RBP17.42■□□□□ 0.38
CPT1A-205ENST00000539743 SALL2Q9Y467 1007 aaPredicted RBP17.42■□□□□ 0.38
CPT1A-205ENST00000539743 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
CPT1A-205ENST00000539743 UBE2Q2Q8WVN8 375 aa17.38■□□□□ 0.37
CPT1A-205ENST00000539743 NOP58Q9Y2X3 529 aaKnown RBP17.38■□□□□ 0.37
CPT1A-205ENST00000539743 RRBP1Q9P2E9 1410 aaKnown RBP17.37■□□□□ 0.37
CPT1A-205ENST00000539743 ANP32CO43423 234 aa17.37■□□□□ 0.37
CPT1A-205ENST00000539743 RANGAP1P46060 587 aaPredicted RBP17.35■□□□□ 0.37
CPT1A-205ENST00000539743 PPP4R2Q9NY27 417 aa17.32■□□□□ 0.36
CPT1A-205ENST00000539743 MAPKBP1O60336 1514 aa17.31■□□□□ 0.36
CPT1A-205ENST00000539743 NBR1Q14596 966 aa17.3■□□□□ 0.36
CPT1A-205ENST00000539743 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
CPT1A-205ENST00000539743 ARAP1Q96P48 1450 aa17.28■□□□□ 0.36
CPT1A-205ENST00000539743 RTL5Q5HYW3 569 aaPredicted RBP17.27■□□□□ 0.36
CPT1A-205ENST00000539743 FGD5Q6ZNL6 1462 aa17.27■□□□□ 0.35
CPT1A-205ENST00000539743 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
CPT1A-205ENST00000539743 TIMELESSQ9UNS1 1208 aa17.25■□□□□ 0.35
CPT1A-205ENST00000539743 IGF1RP08069 1367 aa17.24■□□□□ 0.35
CPT1A-205ENST00000539743 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
CPT1A-205ENST00000539743 CCDC136Q96JN2 1154 aa17.22■□□□□ 0.35
CPT1A-205ENST00000539743 CCNB3Q8WWL7 1395 aa17.21■□□□□ 0.35
CPT1A-205ENST00000539743 IRX6P78412 446 aaPredicted RBP17.21■□□□□ 0.35
CPT1A-205ENST00000539743 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
CPT1A-205ENST00000539743 RAB3GAP2Q9H2M9 1393 aa17.19■□□□□ 0.34
CPT1A-205ENST00000539743 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
CPT1A-205ENST00000539743 HNRNPUQ00839 825 aaKnown RBP eCLIP17.18■□□□□ 0.34
CPT1A-205ENST00000539743 ARHGAP35Q9NRY4 1499 aa17.17■□□□□ 0.34
CPT1A-205ENST00000539743 CARMIL1Q5VZK9 1371 aa17.16■□□□□ 0.34
CPT1A-205ENST00000539743 KANK4Q5T7N3 995 aaPredicted RBP17.16■□□□□ 0.34
CPT1A-205ENST00000539743 IPO9Q96P70 1041 aaKnown RBP17.16■□□□□ 0.34
CPT1A-205ENST00000539743 ANP32AP39687 249 aaKnown RBP17.14■□□□□ 0.33
CPT1A-205ENST00000539743 NESP48681 1621 aa17.14■□□□□ 0.33
CPT1A-205ENST00000539743 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
CPT1A-205ENST00000539743 WASHC2AQ641Q2 1341 aa17.12■□□□□ 0.33
CPT1A-205ENST00000539743 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
CPT1A-205ENST00000539743 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
CPT1A-205ENST00000539743 ZBTB47Q9UFB7 747 aaPredicted RBP17.11■□□□□ 0.33
CPT1A-205ENST00000539743 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
CPT1A-205ENST00000539743 C11orf95C9JLR9 678 aaPredicted RBP17.1■□□□□ 0.33
CPT1A-205ENST00000539743 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.1■□□□□ 0.33
CPT1A-205ENST00000539743 SETD5Q9C0A6 1442 aa17.1■□□□□ 0.33
CPT1A-205ENST00000539743 B4GALNT3Q6L9W6 998 aa17.09■□□□□ 0.33
CPT1A-205ENST00000539743 RTN4Q9NQC3 1192 aaKnown RBP17.08■□□□□ 0.33
CPT1A-205ENST00000539743 USP35Q9P2H5 1018 aa17.08■□□□□ 0.32
CPT1A-205ENST00000539743 RAD54L2Q9Y4B4 1467 aa17.07■□□□□ 0.32
CPT1A-205ENST00000539743 SIN3AQ96ST3 1273 aa17.05■□□□□ 0.32
CPT1A-205ENST00000539743 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
CPT1A-205ENST00000539743 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.32
CPT1A-205ENST00000539743 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.31
CPT1A-205ENST00000539743 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
CPT1A-205ENST00000539743 CUL7Q14999 1698 aa17■□□□□ 0.31
CPT1A-205ENST00000539743 PDS5BQ9NTI5 1447 aa17■□□□□ 0.31
CPT1A-205ENST00000539743 TIAM1Q13009 1591 aa16.96■□□□□ 0.31
CPT1A-205ENST00000539743 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.3
CPT1A-205ENST00000539743 ZBED9Q6R2W3 1325 aa16.95■□□□□ 0.3
CPT1A-205ENST00000539743 EFCAB5A4FU69 1503 aa16.93■□□□□ 0.3
CPT1A-205ENST00000539743 NEFMP07197 916 aa16.92■□□□□ 0.3
CPT1A-205ENST00000539743 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
CPT1A-205ENST00000539743 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
CPT1A-205ENST00000539743 PPM1GO15355 546 aaPredicted RBP16.9■□□□□ 0.3
CPT1A-205ENST00000539743 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
CPT1A-205ENST00000539743 TONSLQ96HA7 1378 aa16.89■□□□□ 0.29
CPT1A-205ENST00000539743 EIF5BO60841 1220 aaKnown RBP16.88■□□□□ 0.29
CPT1A-205ENST00000539743 CTTNBP2Q8WZ74 1663 aa16.88■□□□□ 0.29
CPT1A-205ENST00000539743 PCF11O94913 1555 aaKnown RBP16.88■□□□□ 0.29
CPT1A-205ENST00000539743 KIF21AQ7Z4S6 1674 aa16.87■□□□□ 0.29
CPT1A-205ENST00000539743 GAPVD1Q14C86 1478 aa16.87■□□□□ 0.29
CPT1A-205ENST00000539743 CFAP43Q8NDM7 1665 aa16.86■□□□□ 0.29
CPT1A-205ENST00000539743 PKNOX2Q96KN3 472 aa16.86■□□□□ 0.29
CPT1A-205ENST00000539743 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
CPT1A-205ENST00000539743 TDRD9Q8NDG6 1382 aaKnown RBP16.86■□□□□ 0.29
CPT1A-205ENST00000539743 FHOD3Q2V2M9 1422 aa16.85■□□□□ 0.29
CPT1A-205ENST00000539743 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.29
CPT1A-205ENST00000539743 FYCO1Q9BQS8 1478 aa16.85■□□□□ 0.29
CPT1A-205ENST00000539743 NCOA2Q15596 1464 aa16.83■□□□□ 0.28
CPT1A-205ENST00000539743 SMG6Q86US8 1419 aaKnown RBP16.83■□□□□ 0.28
CPT1A-205ENST00000539743 CASKIN1Q8WXD9 1431 aa16.83■□□□□ 0.28
CPT1A-205ENST00000539743 RNF123Q5XPI4 1314 aa16.83■□□□□ 0.28
CPT1A-205ENST00000539743 P3H3Q8IVL6 736 aa16.83■□□□□ 0.28
CPT1A-205ENST00000539743 BRPF3Q9ULD4 1205 aa16.82■□□□□ 0.28
CPT1A-205ENST00000539743 GSE1Q14687 1217 aa16.81■□□□□ 0.28
CPT1A-205ENST00000539743 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
CPT1A-205ENST00000539743 CNTLNQ9NXG0 1405 aa16.81■□□□□ 0.28
CPT1A-205ENST00000539743 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
CPT1A-205ENST00000539743 LAS1LQ9Y4W2 734 aaKnown RBP16.79■□□□□ 0.28
CPT1A-205ENST00000539743 PHLDB1Q86UU1 1377 aa16.79■□□□□ 0.28
CPT1A-205ENST00000539743 CCDC184Q52MB2 194 aa16.77■□□□□ 0.28
CPT1A-205ENST00000539743 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.28
CPT1A-205ENST00000539743 SAMD9Q5K651 1589 aa16.77■□□□□ 0.28
CPT1A-205ENST00000539743 TCERG1O14776 1098 aaKnown RBP16.75■□□□□ 0.27
CPT1A-205ENST00000539743 GLIPR1L2Q4G1C9 344 aa16.75■□□□□ 0.27
CPT1A-205ENST00000539743 PRKRIP1Q9H875 184 aaPredicted RBP16.75■□□□□ 0.27
CPT1A-205ENST00000539743 MRS2Q9HD23 443 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms