RNA–Protein interactions for RNA: ENST00000539743.5

CPT1A-205, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CPT1A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-205ENST00000539743 NISCHQ9Y2I1 1504 aa24.29■■□□□ 1.48
CPT1A-205ENST00000539743 HRCP23327 699 aa21.25■□□□□ 0.99
CPT1A-205ENST00000539743 PELP1Q8IZL8 1130 aaKnown RBP21.18■□□□□ 0.98
CPT1A-205ENST00000539743 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
CPT1A-205ENST00000539743 PPARGC1BQ86YN6 1023 aaKnown RBP20.55■□□□□ 0.88
CPT1A-205ENST00000539743 MYT1Q01538 1121 aa20.54■□□□□ 0.88
CPT1A-205ENST00000539743 ZCCHC6Q5VYS8 1495 aaKnown RBP20.53■□□□□ 0.88
CPT1A-205ENST00000539743 PCGF6Q9BYE7 350 aa20.5■□□□□ 0.87
CPT1A-205ENST00000539743 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
CPT1A-205ENST00000539743 MYO15BQ96JP2 1530 aa20.3■□□□□ 0.84
CPT1A-205ENST00000539743 DCAF1Q9Y4B6 1507 aa20.18■□□□□ 0.82
CPT1A-205ENST00000539743 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
CPT1A-205ENST00000539743 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
CPT1A-205ENST00000539743 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
CPT1A-205ENST00000539743 ZEB1P37275 1124 aaPredicted RBP20■□□□□ 0.79
CPT1A-205ENST00000539743 DCAF8L2P0C7V8 631 aa19.95■□□□□ 0.78
CPT1A-205ENST00000539743 TRIM26Q12899 539 aaPredicted RBP19.93■□□□□ 0.78
CPT1A-205ENST00000539743 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
CPT1A-205ENST00000539743 LOC105371045A0A1W2PR82 267 aa19.54■□□□□ 0.72
CPT1A-205ENST00000539743 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
CPT1A-205ENST00000539743 GTF3C3Q9Y5Q9 886 aa19.45■□□□□ 0.7
CPT1A-205ENST00000539743 CENPBP07199 599 aaPredicted RBP19.44■□□□□ 0.7
CPT1A-205ENST00000539743 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
CPT1A-205ENST00000539743 SCRIBQ14160 1630 aa19.33■□□□□ 0.69
CPT1A-205ENST00000539743 ABCC9O60706 1549 aa19.32■□□□□ 0.68
CPT1A-205ENST00000539743 NACADO15069 1562 aa19.3■□□□□ 0.68
CPT1A-205ENST00000539743 DIEXFQ68CQ4 756 aaKnown RBP19.14■□□□□ 0.65
CPT1A-205ENST00000539743 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
CPT1A-205ENST00000539743 RB1CC1Q8TDY2 1594 aa19■□□□□ 0.63
CPT1A-205ENST00000539743 CCER1Q8TC90 406 aaPredicted RBP18.93■□□□□ 0.62
CPT1A-205ENST00000539743 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
CPT1A-205ENST00000539743 BCL11AQ9H165 835 aa18.88■□□□□ 0.61
CPT1A-205ENST00000539743 CECR2Q9BXF3 1484 aa18.87■□□□□ 0.61
CPT1A-205ENST00000539743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.86■□□□□ 0.61
CPT1A-205ENST00000539743 MROH2BQ7Z745 1585 aa18.81■□□□□ 0.6
CPT1A-205ENST00000539743 ANP32EQ9BTT0 268 aa18.76■□□□□ 0.59
CPT1A-205ENST00000539743 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
CPT1A-205ENST00000539743 CLSPNQ9HAW4 1339 aa18.72■□□□□ 0.59
CPT1A-205ENST00000539743 BAZ1AQ9NRL2 1556 aaPredicted RBP18.7■□□□□ 0.58
CPT1A-205ENST00000539743 YTHDC1Q96MU7 727 aaKnown RBP18.69■□□□□ 0.58
CPT1A-205ENST00000539743 WIZO95785 1651 aa18.68■□□□□ 0.58
CPT1A-205ENST00000539743 FAM9AQ8IZU1 332 aaPredicted RBP18.68■□□□□ 0.58
CPT1A-205ENST00000539743 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
CPT1A-205ENST00000539743 MIER1Q8N108 512 aa18.56■□□□□ 0.56
CPT1A-205ENST00000539743 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
CPT1A-205ENST00000539743 TSHZ2Q9NRE2 1034 aa18.49■□□□□ 0.55
CPT1A-205ENST00000539743 SUPT16HQ9Y5B9 1047 aaKnown RBP18.48■□□□□ 0.55
CPT1A-205ENST00000539743 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
CPT1A-205ENST00000539743 BICRAQ9NZM4 1560 aa18.46■□□□□ 0.55
CPT1A-205ENST00000539743 CSRNP3Q8WYN3 585 aa18.45■□□□□ 0.54
CPT1A-205ENST00000539743 EIF4G1Q04637 1599 aaKnown RBP18.43■□□□□ 0.54
CPT1A-205ENST00000539743 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.53
CPT1A-205ENST00000539743 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
CPT1A-205ENST00000539743 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
CPT1A-205ENST00000539743 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
CPT1A-205ENST00000539743 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
CPT1A-205ENST00000539743 PRKCSHP14314 528 aaPredicted RBP18.32■□□□□ 0.52
CPT1A-205ENST00000539743 PEG3Q9GZU2 1588 aa18.27■□□□□ 0.52
CPT1A-205ENST00000539743 SLC24A1O60721 1099 aa18.22■□□□□ 0.51
CPT1A-205ENST00000539743 ERICH6Q7L0X2 663 aa18.15■□□□□ 0.5
CPT1A-205ENST00000539743 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
CPT1A-205ENST00000539743 ATAD2BQ9ULI0 1458 aa18.12■□□□□ 0.49
CPT1A-205ENST00000539743 CEP162Q5TB80 1403 aa18.1■□□□□ 0.49
CPT1A-205ENST00000539743 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
CPT1A-205ENST00000539743 RBM19Q9Y4C8 960 aaKnown RBP18.03■□□□□ 0.48
CPT1A-205ENST00000539743 TNIKQ9UKE5 1360 aa18.01■□□□□ 0.47
CPT1A-205ENST00000539743 EEA1Q15075 1411 aa17.97■□□□□ 0.47
CPT1A-205ENST00000539743 MYT1LQ9UL68 1186 aa17.95■□□□□ 0.46
CPT1A-205ENST00000539743 SOGA1O94964 1423 aa17.95■□□□□ 0.46
CPT1A-205ENST00000539743 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
CPT1A-205ENST00000539743 FKBP8Q14318 412 aa17.88■□□□□ 0.45
CPT1A-205ENST00000539743 BCANQ96GW7 911 aa17.88■□□□□ 0.45
CPT1A-205ENST00000539743 SYNJ1O43426 1573 aa17.85■□□□□ 0.45
CPT1A-205ENST00000539743 HMGXB3Q12766 1538 aa17.85■□□□□ 0.45
CPT1A-205ENST00000539743 MSH5O43196 834 aa17.85■□□□□ 0.45
CPT1A-205ENST00000539743 APLP2Q06481 763 aa17.85■□□□□ 0.45
CPT1A-205ENST00000539743 FANCIQ9NVI1 1328 aa17.85■□□□□ 0.45
CPT1A-205ENST00000539743 NCAPD3P42695 1498 aa17.85■□□□□ 0.45
CPT1A-205ENST00000539743 RUSC2Q8N2Y8 1516 aa17.84■□□□□ 0.45
CPT1A-205ENST00000539743 NEFLP07196 543 aa17.82■□□□□ 0.44
CPT1A-205ENST00000539743 GOLGA3Q08378 1498 aa17.77■□□□□ 0.43
CPT1A-205ENST00000539743 DHX57Q6P158 1386 aaKnown RBP17.73■□□□□ 0.43
CPT1A-205ENST00000539743 CEP164Q9UPV0 1460 aa17.71■□□□□ 0.43
CPT1A-205ENST00000539743 TOP2BQ02880 1626 aa17.71■□□□□ 0.43
CPT1A-205ENST00000539743 UBTFP17480 764 aaKnown RBP17.71■□□□□ 0.42
CPT1A-205ENST00000539743 KIF21BO75037 1637 aa17.7■□□□□ 0.42
CPT1A-205ENST00000539743 DEKP35659 375 aaKnown RBP17.68■□□□□ 0.42
CPT1A-205ENST00000539743 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
CPT1A-205ENST00000539743 BIVM-ERCC5R4GMW8 1640 aa17.66■□□□□ 0.42
CPT1A-205ENST00000539743 ERICH6BQ5W0A0 696 aa17.65■□□□□ 0.42
CPT1A-205ENST00000539743 ITGAEP38570 1179 aa17.62■□□□□ 0.41
CPT1A-205ENST00000539743 CFTRP13569 1480 aa17.62■□□□□ 0.41
CPT1A-205ENST00000539743 VPS8Q8N3P4 1428 aa17.62■□□□□ 0.41
CPT1A-205ENST00000539743 CDK11AQ9UQ88 783 aaPredicted RBP17.6■□□□□ 0.41
CPT1A-205ENST00000539743 ANO8Q9HCE9 1232 aaPredicted RBP17.59■□□□□ 0.41
CPT1A-205ENST00000539743 CLIP1P30622 1438 aa17.57■□□□□ 0.4
CPT1A-205ENST00000539743 CUX1P39880 1505 aa17.55■□□□□ 0.4
CPT1A-205ENST00000539743 RAPGEF2Q9Y4G8 1499 aa17.55■□□□□ 0.4
CPT1A-205ENST00000539743 CCER2I3L3R5 266 aa17.52■□□□□ 0.4
CPT1A-205ENST00000539743 CUX2O14529 1486 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms