RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 RAPGEF2Q9Y4G8 1499 aa25.22■■□□□ 1.63
TRA2A-211ENST00000538367 BCANQ96GW7 911 aa25.21■■□□□ 1.63
TRA2A-211ENST00000538367 URB2Q14146 1524 aaKnown RBP25.2■■□□□ 1.62
TRA2A-211ENST00000538367 CCER2I3L3R5 266 aa25.19■■□□□ 1.62
TRA2A-211ENST00000538367 FGD5Q6ZNL6 1462 aa25.18■■□□□ 1.62
TRA2A-211ENST00000538367 ARAP1Q96P48 1450 aa25.12■■□□□ 1.61
TRA2A-211ENST00000538367 MSH5O43196 834 aa25.12■■□□□ 1.61
TRA2A-211ENST00000538367 MRC2Q9UBG0 1479 aa25.12■■□□□ 1.61
TRA2A-211ENST00000538367 MAPKBP1O60336 1514 aa25.12■■□□□ 1.61
TRA2A-211ENST00000538367 KCNH8Q96L42 1107 aa25.11■■□□□ 1.61
TRA2A-211ENST00000538367 ERCC6Q03468 1493 aa25.1■■□□□ 1.61
TRA2A-211ENST00000538367 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
TRA2A-211ENST00000538367 CCNB3Q8WWL7 1395 aa25.06■■□□□ 1.6
TRA2A-211ENST00000538367 TIMELESSQ9UNS1 1208 aa25.04■■□□□ 1.6
TRA2A-211ENST00000538367 PRKCSHP14314 528 aaPredicted RBP25.03■■□□□ 1.6
TRA2A-211ENST00000538367 ERICH6Q7L0X2 663 aa25.03■■□□□ 1.6
TRA2A-211ENST00000538367 KIF27Q86VH2 1401 aa25.01■■□□□ 1.59
TRA2A-211ENST00000538367 PPP1R15AO75807 674 aaPredicted RBP25.01■■□□□ 1.59
TRA2A-211ENST00000538367 ERICH6BQ5W0A0 696 aa25.01■■□□□ 1.59
TRA2A-211ENST00000538367 WDR62O43379 1518 aa25■■□□□ 1.59
TRA2A-211ENST00000538367 PRXQ9BXM0 1461 aa24.98■■□□□ 1.59
TRA2A-211ENST00000538367 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
TRA2A-211ENST00000538367 THOC2Q8NI27 1593 aaKnown RBP24.98■■□□□ 1.59
TRA2A-211ENST00000538367 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
TRA2A-211ENST00000538367 CDK11AQ9UQ88 783 aaPredicted RBP24.96■■□□□ 1.59
TRA2A-211ENST00000538367 WDR97A6NE52 1622 aa24.95■■□□□ 1.58
TRA2A-211ENST00000538367 MAP3K1Q13233 1512 aa24.94■■□□□ 1.58
TRA2A-211ENST00000538367 RAB3GAP2Q9H2M9 1393 aa24.93■■□□□ 1.58
TRA2A-211ENST00000538367 ANP32CO43423 234 aa24.9■■□□□ 1.58
TRA2A-211ENST00000538367 KANK4Q5T7N3 995 aaPredicted RBP24.89■■□□□ 1.58
TRA2A-211ENST00000538367 DDX10Q13206 875 aaKnown RBP24.89■■□□□ 1.57
TRA2A-211ENST00000538367 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
TRA2A-211ENST00000538367 ITGAEP38570 1179 aa24.86■■□□□ 1.57
TRA2A-211ENST00000538367 SETD5Q9C0A6 1442 aa24.86■■□□□ 1.57
TRA2A-211ENST00000538367 ABCA5Q8WWZ7 1642 aa24.8■■□□□ 1.56
TRA2A-211ENST00000538367 DEKP35659 375 aaKnown RBP24.79■■□□□ 1.56
TRA2A-211ENST00000538367 IFT140Q96RY7 1462 aa24.78■■□□□ 1.56
TRA2A-211ENST00000538367 IGF1RP08069 1367 aa24.78■■□□□ 1.56
TRA2A-211ENST00000538367 TRIM52Q96A61 297 aa24.77■■□□□ 1.56
TRA2A-211ENST00000538367 TDRD9Q8NDG6 1382 aaKnown RBP24.74■■□□□ 1.55
TRA2A-211ENST00000538367 TIAM1Q13009 1591 aa24.74■■□□□ 1.55
TRA2A-211ENST00000538367 GAPVD1Q14C86 1478 aa24.73■■□□□ 1.55
TRA2A-211ENST00000538367 ARHGAP35Q9NRY4 1499 aa24.7■■□□□ 1.55
TRA2A-211ENST00000538367 PPP4R2Q9NY27 417 aa24.7■■□□□ 1.54
TRA2A-211ENST00000538367 CUL7Q14999 1698 aa24.69■■□□□ 1.54
TRA2A-211ENST00000538367 PBRM1Q86U86 1689 aa24.67■■□□□ 1.54
TRA2A-211ENST00000538367 CARMIL1Q5VZK9 1371 aa24.66■■□□□ 1.54
TRA2A-211ENST00000538367 ZNF608Q9ULD9 1512 aaPredicted RBP24.63■■□□□ 1.53
TRA2A-211ENST00000538367 AQRO60306 1485 aaKnown RBP eCLIP24.62■■□□□ 1.532e-7■■□□□ 14.5
TRA2A-211ENST00000538367 CFAP43Q8NDM7 1665 aa24.59■■□□□ 1.53
TRA2A-211ENST00000538367 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
TRA2A-211ENST00000538367 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.59■■□□□ 1.531e-7■■□□□ 12.6
TRA2A-211ENST00000538367 RANGAP1P46060 587 aaPredicted RBP24.59■■□□□ 1.53
TRA2A-211ENST00000538367 NOP58Q9Y2X3 529 aaKnown RBP24.59■■□□□ 1.53
TRA2A-211ENST00000538367 LRRC9Q6ZRR7 1453 aa24.58■■□□□ 1.53
TRA2A-211ENST00000538367 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
TRA2A-211ENST00000538367 FHAD1B1AJZ9 1412 aa24.55■■□□□ 1.52
TRA2A-211ENST00000538367 SIN3AQ96ST3 1273 aa24.53■■□□□ 1.52
TRA2A-211ENST00000538367 HNRNPUQ00839 825 aaKnown RBP eCLIP24.52■■□□□ 1.528e-8■□□□□ 9
TRA2A-211ENST00000538367 ADAMTS12P58397 1594 aa24.48■■□□□ 1.51
TRA2A-211ENST00000538367 TONSLQ96HA7 1378 aa24.45■■□□□ 1.5
TRA2A-211ENST00000538367 PHLDB1Q86UU1 1377 aa24.45■■□□□ 1.5
TRA2A-211ENST00000538367 NCOA2Q15596 1464 aa24.42■■□□□ 1.5
TRA2A-211ENST00000538367 CTTNBP2Q8WZ74 1663 aa24.42■■□□□ 1.5
TRA2A-211ENST00000538367 SNAPC4Q5SXM2 1469 aa24.41■■□□□ 1.5
TRA2A-211ENST00000538367 MAGI1Q96QZ7 1491 aaPredicted RBP24.39■■□□□ 1.49
TRA2A-211ENST00000538367 IRX6P78412 446 aaPredicted RBP24.37■■□□□ 1.49
TRA2A-211ENST00000538367 ZBED9Q6R2W3 1325 aa24.36■■□□□ 1.49
TRA2A-211ENST00000538367 RTL5Q5HYW3 569 aaPredicted RBP24.36■■□□□ 1.49
TRA2A-211ENST00000538367 UACAQ9BZF9 1416 aa24.35■■□□□ 1.49
TRA2A-211ENST00000538367 KDM5BQ9UGL1 1544 aa24.34■■□□□ 1.49
TRA2A-211ENST00000538367 ANP32AP39687 249 aaKnown RBP24.32■■□□□ 1.48
TRA2A-211ENST00000538367 IPO9Q96P70 1041 aaKnown RBP24.32■■□□□ 1.48
TRA2A-211ENST00000538367 CNTLNQ9NXG0 1405 aa24.31■■□□□ 1.48
TRA2A-211ENST00000538367 HIRIP3Q9BW71 556 aaPredicted RBP24.31■■□□□ 1.48
TRA2A-211ENST00000538367 ANO8Q9HCE9 1232 aaPredicted RBP24.31■■□□□ 1.48
TRA2A-211ENST00000538367 SYNJ2O15056 1496 aa24.29■■□□□ 1.48
TRA2A-211ENST00000538367 CCDC18Q5T9S5 1454 aa24.29■■□□□ 1.48
TRA2A-211ENST00000538367 HFM1A2PYH4 1435 aa24.28■■□□□ 1.48
TRA2A-211ENST00000538367 PAK3O75914 559 aaPredicted RBP24.28■■□□□ 1.48
TRA2A-211ENST00000538367 PCF11O94913 1555 aaKnown RBP24.28■■□□□ 1.48
TRA2A-211ENST00000538367 NBR1Q14596 966 aa24.27■■□□□ 1.48
TRA2A-211ENST00000538367 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
TRA2A-211ENST00000538367 FAM50AQ14320 339 aaKnown RBP24.26■■□□□ 1.47
TRA2A-211ENST00000538367 FYCO1Q9BQS8 1478 aa24.25■■□□□ 1.47
TRA2A-211ENST00000538367 B4GALNT3Q6L9W6 998 aa24.25■■□□□ 1.47
TRA2A-211ENST00000538367 PTPN23Q9H3S7 1636 aa24.24■■□□□ 1.47
TRA2A-211ENST00000538367 WASHC2AQ641Q2 1341 aa24.24■■□□□ 1.47
TRA2A-211ENST00000538367 USP35Q9P2H5 1018 aa24.22■■□□□ 1.47
TRA2A-211ENST00000538367 SMG6Q86US8 1419 aaKnown RBP24.21■■□□□ 1.47
TRA2A-211ENST00000538367 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
TRA2A-211ENST00000538367 ZBTB47Q9UFB7 747 aaPredicted RBP24.2■■□□□ 1.47
TRA2A-211ENST00000538367 RNF123Q5XPI4 1314 aa24.19■■□□□ 1.46
TRA2A-211ENST00000538367 POLR1AO95602 1720 aaPredicted RBP24.18■■□□□ 1.46
TRA2A-211ENST00000538367 EFCAB5A4FU69 1503 aa24.18■■□□□ 1.46
TRA2A-211ENST00000538367 IQGAP2Q13576 1575 aa24.17■■□□□ 1.46
TRA2A-211ENST00000538367 C11orf95C9JLR9 678 aaPredicted RBP24.17■■□□□ 1.46
TRA2A-211ENST00000538367 SALL2Q9Y467 1007 aaPredicted RBP24.16■■□□□ 1.46
TRA2A-211ENST00000538367 FGD6Q6ZV73 1430 aa24.16■■□□□ 1.46
TRA2A-211ENST00000538367 FBLN2P98095 1184 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms