RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 TSHZ2Q9NRE2 1034 aa17.32■□□□□ 0.36
PTCD2-211ENST00000536805 FHAD1B1AJZ9 1412 aa17.31■□□□□ 0.36
PTCD2-211ENST00000536805 TIMELESSQ9UNS1 1208 aa17.31■□□□□ 0.36
PTCD2-211ENST00000536805 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
PTCD2-211ENST00000536805 ITGAEP38570 1179 aa17.28■□□□□ 0.36
PTCD2-211ENST00000536805 PHLDB1Q86UU1 1377 aa17.28■□□□□ 0.36
PTCD2-211ENST00000536805 CARMIL1Q5VZK9 1371 aa17.26■□□□□ 0.35
PTCD2-211ENST00000536805 PCF11O94913 1555 aaKnown RBP17.26■□□□□ 0.35
PTCD2-211ENST00000536805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.35
PTCD2-211ENST00000536805 FGD5Q6ZNL6 1462 aa17.22■□□□□ 0.35
PTCD2-211ENST00000536805 KCNH8Q96L42 1107 aa17.21■□□□□ 0.35
PTCD2-211ENST00000536805 EFCAB5A4FU69 1503 aa17.21■□□□□ 0.34
PTCD2-211ENST00000536805 FYCO1Q9BQS8 1478 aa17.2■□□□□ 0.34
PTCD2-211ENST00000536805 PPP1R15AO75807 674 aaPredicted RBP17.2■□□□□ 0.34
PTCD2-211ENST00000536805 AQRO60306 1485 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTCD2-211ENST00000536805 CCER2I3L3R5 266 aa17.19■□□□□ 0.34
PTCD2-211ENST00000536805 ANP32EQ9BTT0 268 aa17.18■□□□□ 0.34
PTCD2-211ENST00000536805 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
PTCD2-211ENST00000536805 DDX10Q13206 875 aaKnown RBP17.16■□□□□ 0.34
PTCD2-211ENST00000536805 CASKIN1Q8WXD9 1431 aa17.15■□□□□ 0.34
PTCD2-211ENST00000536805 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
PTCD2-211ENST00000536805 FAM50AQ14320 339 aaKnown RBP17.14■□□□□ 0.33
PTCD2-211ENST00000536805 CC2D2AQ9P2K1 1620 aa17.12■□□□□ 0.33
PTCD2-211ENST00000536805 FKBP8Q14318 412 aa17.11■□□□□ 0.33
PTCD2-211ENST00000536805 CUL7Q14999 1698 aa17.1■□□□□ 0.33
PTCD2-211ENST00000536805 CTTNBP2Q8WZ74 1663 aa17.1■□□□□ 0.33
PTCD2-211ENST00000536805 NEFLP07196 543 aa17.09■□□□□ 0.33
PTCD2-211ENST00000536805 ANP32CO43423 234 aa17.08■□□□□ 0.33
PTCD2-211ENST00000536805 FHOD3Q2V2M9 1422 aa17.08■□□□□ 0.32
PTCD2-211ENST00000536805 ABCA10Q8WWZ4 1543 aa17.08■□□□□ 0.32
PTCD2-211ENST00000536805 FGD6Q6ZV73 1430 aa17.07■□□□□ 0.32
PTCD2-211ENST00000536805 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
PTCD2-211ENST00000536805 CCDC18Q5T9S5 1454 aa17.06■□□□□ 0.32
PTCD2-211ENST00000536805 HFM1A2PYH4 1435 aa17.05■□□□□ 0.32
PTCD2-211ENST00000536805 BCANQ96GW7 911 aa17.05■□□□□ 0.32
PTCD2-211ENST00000536805 FMN1Q68DA7 1419 aa17.04■□□□□ 0.32
PTCD2-211ENST00000536805 UACAQ9BZF9 1416 aa17.04■□□□□ 0.32
PTCD2-211ENST00000536805 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
PTCD2-211ENST00000536805 TONSLQ96HA7 1378 aa17.03■□□□□ 0.32
PTCD2-211ENST00000536805 SNAPC4Q5SXM2 1469 aa17.03■□□□□ 0.32
PTCD2-211ENST00000536805 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.31
PTCD2-211ENST00000536805 THOC2Q8NI27 1593 aaKnown RBP17■□□□□ 0.31
PTCD2-211ENST00000536805 P3H3Q8IVL6 736 aa16.98■□□□□ 0.31
PTCD2-211ENST00000536805 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
PTCD2-211ENST00000536805 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
PTCD2-211ENST00000536805 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
PTCD2-211ENST00000536805 KDM5BQ9UGL1 1544 aa16.96■□□□□ 0.31
PTCD2-211ENST00000536805 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
PTCD2-211ENST00000536805 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
PTCD2-211ENST00000536805 RBM19Q9Y4C8 960 aaKnown RBP16.95■□□□□ 0.3
PTCD2-211ENST00000536805 RAD54L2Q9Y4B4 1467 aa16.95■□□□□ 0.3
PTCD2-211ENST00000536805 NAIPQ13075 1403 aa16.94■□□□□ 0.3
PTCD2-211ENST00000536805 PTPRKQ15262 1439 aa16.94■□□□□ 0.3
PTCD2-211ENST00000536805 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
PTCD2-211ENST00000536805 EHBP1L1Q8N3D4 1523 aa16.93■□□□□ 0.3
PTCD2-211ENST00000536805 SUPT6HQ7KZ85 1726 aaKnown RBP16.93■□□□□ 0.3
PTCD2-211ENST00000536805 MTUS2Q5JR59 1369 aa16.93■□□□□ 0.3
PTCD2-211ENST00000536805 KIF21AQ7Z4S6 1674 aa16.93■□□□□ 0.3
PTCD2-211ENST00000536805 HIRIP3Q9BW71 556 aaPredicted RBP16.93■□□□□ 0.3
PTCD2-211ENST00000536805 LRRIQ1Q96JM4 1722 aa16.93■□□□□ 0.3
PTCD2-211ENST00000536805 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
PTCD2-211ENST00000536805 NCOA2Q15596 1464 aa16.92■□□□□ 0.3
PTCD2-211ENST00000536805 GCC2Q8IWJ2 1684 aa16.9■□□□□ 0.3
PTCD2-211ENST00000536805 HECW1Q76N89 1606 aa16.89■□□□□ 0.3
PTCD2-211ENST00000536805 ARHGEF11O15085 1522 aa16.89■□□□□ 0.29
PTCD2-211ENST00000536805 UGGT2Q9NYU1 1516 aa16.87■□□□□ 0.29
PTCD2-211ENST00000536805 AKNAQ7Z591 1439 aa16.87■□□□□ 0.29
PTCD2-211ENST00000536805 ABCA5Q8WWZ7 1642 aa16.86■□□□□ 0.29
PTCD2-211ENST00000536805 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
PTCD2-211ENST00000536805 ERICH6BQ5W0A0 696 aa16.84■□□□□ 0.29
PTCD2-211ENST00000536805 FANCIQ9NVI1 1328 aa16.81■□□□□ 0.28
PTCD2-211ENST00000536805 HNRNPUQ00839 825 aaKnown RBP eCLIP16.8■□□□□ 0.28
PTCD2-211ENST00000536805 CNTLNQ9NXG0 1405 aa16.79■□□□□ 0.28
PTCD2-211ENST00000536805 DENND4BO75064 1496 aaPredicted RBP16.78■□□□□ 0.28
PTCD2-211ENST00000536805 WASHC2AQ641Q2 1341 aa16.77■□□□□ 0.28
PTCD2-211ENST00000536805 MAGI3Q5TCQ9 1506 aa16.77■□□□□ 0.27
PTCD2-211ENST00000536805 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
PTCD2-211ENST00000536805 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
PTCD2-211ENST00000536805 BCL11AQ9H165 835 aa16.75■□□□□ 0.27
PTCD2-211ENST00000536805 CDK11AQ9UQ88 783 aaPredicted RBP16.75■□□□□ 0.27
PTCD2-211ENST00000536805 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
PTCD2-211ENST00000536805 GAPVD1Q14C86 1478 aa16.75■□□□□ 0.27
PTCD2-211ENST00000536805 EIF4G2P78344 907 aaKnown RBP eCLIP16.73■□□□□ 0.27
PTCD2-211ENST00000536805 NCOA1Q15788 1441 aa16.73■□□□□ 0.27
PTCD2-211ENST00000536805 MIA2Q96PC5 1412 aa16.73■□□□□ 0.27
PTCD2-211ENST00000536805 NESP48681 1621 aa16.72■□□□□ 0.27
PTCD2-211ENST00000536805 POLR1AO95602 1720 aaPredicted RBP16.72■□□□□ 0.27
PTCD2-211ENST00000536805 MSH5O43196 834 aa16.72■□□□□ 0.27
PTCD2-211ENST00000536805 KDM6BO15054 1643 aa16.71■□□□□ 0.27
PTCD2-211ENST00000536805 PPP4R2Q9NY27 417 aa16.7■□□□□ 0.26
PTCD2-211ENST00000536805 CCDC7Q96M83 1385 aa16.68■□□□□ 0.26
PTCD2-211ENST00000536805 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
PTCD2-211ENST00000536805 EPRSP07814 1512 aaKnown RBP16.66■□□□□ 0.26
PTCD2-211ENST00000536805 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
PTCD2-211ENST00000536805 ZBED9Q6R2W3 1325 aa16.66■□□□□ 0.26
PTCD2-211ENST00000536805 RPRD2Q5VT52 1461 aaKnown RBP16.65■□□□□ 0.26
PTCD2-211ENST00000536805 MPHOSPH9Q99550 1183 aa16.64■□□□□ 0.26
PTCD2-211ENST00000536805 PRKRIP1Q9H875 184 aaPredicted RBP16.64■□□□□ 0.26
PTCD2-211ENST00000536805 ROCK1Q13464 1354 aa16.64■□□□□ 0.25
PTCD2-211ENST00000536805 TEX14Q8IWB6 1497 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms