RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
LINC01089-204ENST00000535643 TOP2BQ02880 1626 aa21.8■■□□□ 1.08
LINC01089-204ENST00000535643 COL17A1Q9UMD9 1497 aaPredicted RBP21.76■■□□□ 1.07
LINC01089-204ENST00000535643 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
LINC01089-204ENST00000535643 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
LINC01089-204ENST00000535643 NUP160Q12769 1436 aa21.64■■□□□ 1.06
LINC01089-204ENST00000535643 PPRC1Q5VV67 1664 aaKnown RBP21.64■■□□□ 1.05
LINC01089-204ENST00000535643 TOP2AP11388 1531 aaKnown RBP21.64■■□□□ 1.05
LINC01089-204ENST00000535643 GRIN2AQ12879 1464 aa21.62■■□□□ 1.05
LINC01089-204ENST00000535643 ADCY10Q96PN6 1610 aa21.61■■□□□ 1.05
LINC01089-204ENST00000535643 PRG4Q92954 1404 aaPredicted RBP21.61■■□□□ 1.05
LINC01089-204ENST00000535643 PCF11O94913 1555 aaKnown RBP21.6■■□□□ 1.05
LINC01089-204ENST00000535643 PBRM1Q86U86 1689 aa21.58■■□□□ 1.05
LINC01089-204ENST00000535643 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
LINC01089-204ENST00000535643 PTPRMP28827 1452 aa21.52■■□□□ 1.03
LINC01089-204ENST00000535643 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.03
LINC01089-204ENST00000535643 HSPA2P54652 639 aa21.44■■□□□ 1.02
LINC01089-204ENST00000535643 GLI2P10070 1586 aa21.42■■□□□ 1.02
LINC01089-204ENST00000535643 JPH4Q96JJ6 628 aa21.42■■□□□ 1.02
LINC01089-204ENST00000535643 KIF21BO75037 1637 aa21.34■■□□□ 1.01
LINC01089-204ENST00000535643 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1
LINC01089-204ENST00000535643 ADAMTS12P58397 1594 aa21.32■■□□□ 1
LINC01089-204ENST00000535643 TEX14Q8IWB6 1497 aa21.32■■□□□ 1
LINC01089-204ENST00000535643 ASXL2Q76L83 1435 aa21.29■■□□□ 1
LINC01089-204ENST00000535643 ADAMTSL3P82987 1691 aa21.28■■□□□ 1
LINC01089-204ENST00000535643 PLB1Q6P1J6 1458 aa21.26■□□□□ 0.99
LINC01089-204ENST00000535643 CUX1P39880 1505 aa21.23■□□□□ 0.99
LINC01089-204ENST00000535643 MAP3K4Q9Y6R4 1608 aa21.22■□□□□ 0.99
LINC01089-204ENST00000535643 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
LINC01089-204ENST00000535643 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
LINC01089-204ENST00000535643 EPRSP07814 1512 aaKnown RBP21.14■□□□□ 0.98
LINC01089-204ENST00000535643 ABCC2Q92887 1545 aa21.14■□□□□ 0.98
LINC01089-204ENST00000535643 MADDQ8WXG6 1647 aa21.11■□□□□ 0.97
LINC01089-204ENST00000535643 MED1Q15648 1581 aaPredicted RBP21.09■□□□□ 0.97
LINC01089-204ENST00000535643 KIAA0586Q9BVV6 1533 aa21.09■□□□□ 0.97
LINC01089-204ENST00000535643 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.96
LINC01089-204ENST00000535643 BCORL1Q5H9F3 1711 aa21.01■□□□□ 0.95
LINC01089-204ENST00000535643 PTPRGP23470 1445 aa20.99■□□□□ 0.95
LINC01089-204ENST00000535643 PLPPR3Q6T4P5 718 aa20.98■□□□□ 0.95
LINC01089-204ENST00000535643 CUL7Q14999 1698 aa20.98■□□□□ 0.95
LINC01089-204ENST00000535643 IQSEC2Q5JU85 1478 aa20.97■□□□□ 0.95
LINC01089-204ENST00000535643 DMRT2Q9Y5R5 561 aa20.97■□□□□ 0.95
LINC01089-204ENST00000535643 TTBK1Q5TCY1 1321 aaPredicted RBP20.96■□□□□ 0.95
LINC01089-204ENST00000535643 YEATS2Q9ULM3 1422 aa20.95■□□□□ 0.95
LINC01089-204ENST00000535643 RIMS1Q86UR5 1692 aaKnown RBP20.94■□□□□ 0.94
LINC01089-204ENST00000535643 LTBP4Q8N2S1 1624 aa20.92■□□□□ 0.94
LINC01089-204ENST00000535643 ARID4BQ4LE39 1312 aaPredicted RBP20.9■□□□□ 0.94
LINC01089-204ENST00000535643 MAGI3Q5TCQ9 1506 aa20.89■□□□□ 0.94
LINC01089-204ENST00000535643 STRCQ7RTU9 1775 aa20.86■□□□□ 0.93
LINC01089-204ENST00000535643 ERICH3Q5RHP9 1530 aa20.85■□□□□ 0.93
LINC01089-204ENST00000535643 UHRF1BP1LA0JNW5 1464 aa20.84■□□□□ 0.93
LINC01089-204ENST00000535643 UBAP1LF5GYI3 381 aa20.84■□□□□ 0.93
LINC01089-204ENST00000535643 CD109Q6YHK3 1445 aa20.83■□□□□ 0.93
LINC01089-204ENST00000535643 SRCAPQ6ZRS2 3230 aa20.82■□□□□ 0.92
LINC01089-204ENST00000535643 KDM5BQ9UGL1 1544 aa20.79■□□□□ 0.92
LINC01089-204ENST00000535643 ARAP3Q8WWN8 1544 aa20.78■□□□□ 0.92
LINC01089-204ENST00000535643 HSPA1LP34931 641 aa20.78■□□□□ 0.92
LINC01089-204ENST00000535643 PTPRTO14522 1441 aa20.77■□□□□ 0.91
LINC01089-204ENST00000535643 TNIKQ9UKE5 1360 aa20.76■□□□□ 0.91
LINC01089-204ENST00000535643 UACAQ9BZF9 1416 aa20.75■□□□□ 0.91
LINC01089-204ENST00000535643 WDR7Q9Y4E6 1490 aa20.73■□□□□ 0.91
LINC01089-204ENST00000535643 CFAP43Q8NDM7 1665 aa20.72■□□□□ 0.91
LINC01089-204ENST00000535643 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
LINC01089-204ENST00000535643 ZCCHC11Q5TAX3 1644 aaKnown RBP20.7■□□□□ 0.9
LINC01089-204ENST00000535643 RAPGEF3O95398 923 aa20.67■□□□□ 0.9
LINC01089-204ENST00000535643 PREX1Q8TCU6 1659 aa20.65■□□□□ 0.9
LINC01089-204ENST00000535643 KCNH8Q96L42 1107 aa20.6■□□□□ 0.89
LINC01089-204ENST00000535643 RGS17Q9UGC6 210 aaPredicted RBP20.6■□□□□ 0.89
LINC01089-204ENST00000535643 CARMIL2Q6F5E8 1435 aa20.6■□□□□ 0.89
LINC01089-204ENST00000535643 FOXD1Q16676 465 aa20.59■□□□□ 0.89
LINC01089-204ENST00000535643 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
LINC01089-204ENST00000535643 TTC37Q6PGP7 1564 aa20.56■□□□□ 0.88
LINC01089-204ENST00000535643 POGZQ7Z3K3 1410 aa20.53■□□□□ 0.88
LINC01089-204ENST00000535643 PIP4K2BP78356 416 aa20.52■□□□□ 0.88
LINC01089-204ENST00000535643 UHRF1BP1Q6BDS2 1440 aa20.52■□□□□ 0.87
LINC01089-204ENST00000535643 FRMPD1Q5SYB0 1578 aa20.5■□□□□ 0.87
LINC01089-204ENST00000535643 ZNF335Q9H4Z2 1342 aaPredicted RBP20.5■□□□□ 0.87
LINC01089-204ENST00000535643 ARHGEF40Q8TER5 1519 aa20.49■□□□□ 0.87
LINC01089-204ENST00000535643 CEBPAP49715 358 aaPredicted RBP20.49■□□□□ 0.87
LINC01089-204ENST00000535643 PHLDB1Q86UU1 1377 aa20.48■□□□□ 0.87
LINC01089-204ENST00000535643 MLECQ14165 292 aa20.47■□□□□ 0.87
LINC01089-204ENST00000535643 FANCAO15360 1455 aa20.46■□□□□ 0.87
LINC01089-204ENST00000535643 FER1L4A9Z1Z3 1794 aa20.46■□□□□ 0.87
LINC01089-204ENST00000535643 SIGLEC1Q9BZZ2 1709 aa20.41■□□□□ 0.86
LINC01089-204ENST00000535643 POTEAQ6S8J7 498 aa20.39■□□□□ 0.85
LINC01089-204ENST00000535643 NCOA1Q15788 1441 aa20.38■□□□□ 0.85
LINC01089-204ENST00000535643 DISP1Q96F81 1524 aa20.36■□□□□ 0.85
LINC01089-204ENST00000535643 TOM1O60784 492 aa20.35■□□□□ 0.85
LINC01089-204ENST00000535643 SETD1AO15047 1707 aaKnown RBP20.34■□□□□ 0.85
LINC01089-204ENST00000535643 AKNAQ7Z591 1439 aa20.34■□□□□ 0.85
LINC01089-204ENST00000535643 NEO1Q92859 1461 aa20.32■□□□□ 0.84
LINC01089-204ENST00000535643 SETD1BQ9UPS6 1966 aaKnown RBP20.31■□□□□ 0.84
LINC01089-204ENST00000535643 ARHGEF12Q9NZN5 1544 aa20.3■□□□□ 0.84
LINC01089-204ENST00000535643 UPF1Q92900 1129 aaKnown RBP eCLIP20.29■□□□□ 0.84
LINC01089-204ENST00000535643 BIVM-ERCC5R4GMW8 1640 aa20.27■□□□□ 0.83
LINC01089-204ENST00000535643 KIAA0556O60303 1618 aa20.24■□□□□ 0.83
LINC01089-204ENST00000535643 IQGAP2Q13576 1575 aa20.22■□□□□ 0.83
LINC01089-204ENST00000535643 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
LINC01089-204ENST00000535643 IFFO2Q5TF58 517 aa20.19■□□□□ 0.82
LINC01089-204ENST00000535643 ABCA9Q8IUA7 1624 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms