RNA–Protein interactions for RNA: ENST00000535120.1

MRE11-205, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2

Gene MRE11, Length 234 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-205ENST00000535120 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
MRE11-205ENST00000535120 BIVM-ERCC5R4GMW8 1640 aa12.83□□□□□ -0.36
MRE11-205ENST00000535120 KIF13AQ9H1H9 1805 aa12.76□□□□□ -0.37
MRE11-205ENST00000535120 ABCC10Q5T3U5 1492 aa12.76□□□□□ -0.37
MRE11-205ENST00000535120 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
MRE11-205ENST00000535120 IGF1RP08069 1367 aa12.71□□□□□ -0.37
MRE11-205ENST00000535120 ADCY10Q96PN6 1610 aa12.71□□□□□ -0.37
MRE11-205ENST00000535120 KDM4FA0A1W2PPD8 638 aa12.7□□□□□ -0.38
MRE11-205ENST00000535120 PTPRGP23470 1445 aa12.7□□□□□ -0.38
MRE11-205ENST00000535120 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
MRE11-205ENST00000535120 MAPKBP1O60336 1514 aa12.69□□□□□ -0.38
MRE11-205ENST00000535120 KIAA0586Q9BVV6 1533 aa12.69□□□□□ -0.38
MRE11-205ENST00000535120 KIF27Q86VH2 1401 aa12.69□□□□□ -0.38
MRE11-205ENST00000535120 KDM6BO15054 1643 aa12.68□□□□□ -0.38
MRE11-205ENST00000535120 TSPOAP1O95153 1857 aa12.67□□□□□ -0.38
MRE11-205ENST00000535120 CARMIL1Q5VZK9 1371 aa12.65□□□□□ -0.38
MRE11-205ENST00000535120 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
MRE11-205ENST00000535120 TNIKQ9UKE5 1360 aa12.62□□□□□ -0.39
MRE11-205ENST00000535120 ASXL2Q76L83 1435 aa12.61□□□□□ -0.39
MRE11-205ENST00000535120 CUL7Q14999 1698 aa12.61□□□□□ -0.39
MRE11-205ENST00000535120 ABCC2Q92887 1545 aa12.58□□□□□ -0.4
MRE11-205ENST00000535120 ILDR1Q86SU0 546 aaPredicted RBP12.56□□□□□ -0.4
MRE11-205ENST00000535120 PLB1Q6P1J6 1458 aa12.56□□□□□ -0.4
MRE11-205ENST00000535120 UACAQ9BZF9 1416 aa12.55□□□□□ -0.4
MRE11-205ENST00000535120 IQGAP2Q13576 1575 aa12.54□□□□□ -0.4
MRE11-205ENST00000535120 ADGRL1O94910 1474 aa12.53□□□□□ -0.4
MRE11-205ENST00000535120 KCNH8Q96L42 1107 aa12.51□□□□□ -0.41
MRE11-205ENST00000535120 COL17A1Q9UMD9 1497 aaPredicted RBP12.5□□□□□ -0.41
MRE11-205ENST00000535120 DISP1Q96F81 1524 aa12.5□□□□□ -0.41
MRE11-205ENST00000535120 EPRSP07814 1512 aaKnown RBP12.49□□□□□ -0.41
MRE11-205ENST00000535120 UHRF1BP1LA0JNW5 1464 aa12.49□□□□□ -0.41
MRE11-205ENST00000535120 ARID3CA6NKF2 412 aa12.49□□□□□ -0.41
MRE11-205ENST00000535120 GLI2P10070 1586 aa12.47□□□□□ -0.41
MRE11-205ENST00000535120 RAPGEF2Q9Y4G8 1499 aa12.47□□□□□ -0.41
MRE11-205ENST00000535120 PPRC1Q5VV67 1664 aaKnown RBP12.47□□□□□ -0.41
MRE11-205ENST00000535120 TEX14Q8IWB6 1497 aa12.46□□□□□ -0.42
MRE11-205ENST00000535120 KDM5BQ9UGL1 1544 aa12.45□□□□□ -0.42
MRE11-205ENST00000535120 ZCCHC11Q5TAX3 1644 aaKnown RBP12.44□□□□□ -0.42
MRE11-205ENST00000535120 P3H3Q8IVL6 736 aa12.43□□□□□ -0.42
MRE11-205ENST00000535120 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
MRE11-205ENST00000535120 KIAA0556O60303 1618 aa12.42□□□□□ -0.42
MRE11-205ENST00000535120 WDR7Q9Y4E6 1490 aa12.41□□□□□ -0.42
MRE11-205ENST00000535120 MAP3K4Q9Y6R4 1608 aa12.41□□□□□ -0.42
MRE11-205ENST00000535120 CD109Q6YHK3 1445 aa12.41□□□□□ -0.42
MRE11-205ENST00000535120 HECW2Q9P2P5 1572 aa12.39□□□□□ -0.43
MRE11-205ENST00000535120 FAM9AQ8IZU1 332 aaPredicted RBP12.38□□□□□ -0.43
MRE11-205ENST00000535120 RANGAP1P46060 587 aaPredicted RBP12.37□□□□□ -0.43
MRE11-205ENST00000535120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.36□□□□□ -0.43
MRE11-205ENST00000535120 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
MRE11-205ENST00000535120 GOLGA3Q08378 1498 aa12.35□□□□□ -0.43
MRE11-205ENST00000535120 MAGI3Q5TCQ9 1506 aa12.32□□□□□ -0.44
MRE11-205ENST00000535120 ABCA8O94911 1581 aa12.31□□□□□ -0.44
MRE11-205ENST00000535120 RAPGEF3O95398 923 aa12.31□□□□□ -0.44
MRE11-205ENST00000535120 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
MRE11-205ENST00000535120 ARID4BQ4LE39 1312 aaPredicted RBP12.31□□□□□ -0.44
MRE11-205ENST00000535120 CTTNBP2Q8WZ74 1663 aa12.29□□□□□ -0.44
MRE11-205ENST00000535120 KIF21BO75037 1637 aa12.28□□□□□ -0.44
MRE11-205ENST00000535120 CFAP43Q8NDM7 1665 aa12.28□□□□□ -0.44
MRE11-205ENST00000535120 ATP10BO94823 1461 aa12.27□□□□□ -0.45
MRE11-205ENST00000535120 PRXQ9BXM0 1461 aa12.26□□□□□ -0.45
MRE11-205ENST00000535120 ARAP3Q8WWN8 1544 aa12.22□□□□□ -0.45
MRE11-205ENST00000535120 FBXO41Q8TF61 875 aa12.22□□□□□ -0.45
MRE11-205ENST00000535120 CSRNP3Q8WYN3 585 aa12.22□□□□□ -0.45
MRE11-205ENST00000535120 PTPRMP28827 1452 aa12.21□□□□□ -0.45
MRE11-205ENST00000535120 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.45
MRE11-205ENST00000535120 PHLDB1Q86UU1 1377 aa12.18□□□□□ -0.46
MRE11-205ENST00000535120 PLEKHD1A6NEE1 506 aa12.18□□□□□ -0.46
MRE11-205ENST00000535120 MLECQ14165 292 aa12.18□□□□□ -0.46
MRE11-205ENST00000535120 HSPA2P54652 639 aa12.17□□□□□ -0.46
MRE11-205ENST00000535120 ATP1B4Q9UN42 357 aaPredicted RBP12.17□□□□□ -0.46
MRE11-205ENST00000535120 FHOD3Q2V2M9 1422 aa12.17□□□□□ -0.46
MRE11-205ENST00000535120 ABCA9Q8IUA7 1624 aa12.16□□□□□ -0.46
MRE11-205ENST00000535120 RAPGEF6Q8TEU7 1601 aa12.15□□□□□ -0.46
MRE11-205ENST00000535120 NEO1Q92859 1461 aa12.15□□□□□ -0.46
MRE11-205ENST00000535120 NUP153P49790 1475 aaKnown RBP12.14□□□□□ -0.47
MRE11-205ENST00000535120 ADAMTSL3P82987 1691 aa12.13□□□□□ -0.47
MRE11-205ENST00000535120 MADDQ8WXG6 1647 aa12.13□□□□□ -0.47
MRE11-205ENST00000535120 DENND4BO75064 1496 aaPredicted RBP12.13□□□□□ -0.47
MRE11-205ENST00000535120 AKNAQ7Z591 1439 aa12.11□□□□□ -0.47
MRE11-205ENST00000535120 SAMD9Q5K651 1589 aa12.11□□□□□ -0.47
MRE11-205ENST00000535120 FRMPD1Q5SYB0 1578 aa12.11□□□□□ -0.47
MRE11-205ENST00000535120 PCF11O94913 1555 aaKnown RBP12.1□□□□□ -0.47
MRE11-205ENST00000535120 FANCAO15360 1455 aa12.1□□□□□ -0.47
MRE11-205ENST00000535120 BCORL1Q5H9F3 1711 aa12.1□□□□□ -0.47
MRE11-205ENST00000535120 LMTK3Q96Q04 1460 aa12.09□□□□□ -0.47
MRE11-205ENST00000535120 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
MRE11-205ENST00000535120 RIMS1Q86UR5 1692 aaKnown RBP12.09□□□□□ -0.47
MRE11-205ENST00000535120 POGZQ7Z3K3 1410 aa12.08□□□□□ -0.48
MRE11-205ENST00000535120 YEATS2Q9ULM3 1422 aa12.08□□□□□ -0.48
MRE11-205ENST00000535120 ARHGEF40Q8TER5 1519 aa12.07□□□□□ -0.48
MRE11-205ENST00000535120 UBTFP17480 764 aaKnown RBP12.07□□□□□ -0.48
MRE11-205ENST00000535120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.48
MRE11-205ENST00000535120 CEBPAP49715 358 aaPredicted RBP12.05□□□□□ -0.48
MRE11-205ENST00000535120 CDK13Q14004 1512 aaKnown RBP12.05□□□□□ -0.48
MRE11-205ENST00000535120 ZFYVE16Q7Z3T8 1539 aa12.05□□□□□ -0.48
MRE11-205ENST00000535120 SCAPERQ9BY12 1400 aa12.04□□□□□ -0.48
MRE11-205ENST00000535120 CERKQ8TCT0 537 aa12.04□□□□□ -0.48
MRE11-205ENST00000535120 TTC37Q6PGP7 1564 aa12.03□□□□□ -0.48
MRE11-205ENST00000535120 EEA1Q15075 1411 aa12.03□□□□□ -0.48
MRE11-205ENST00000535120 RICTORQ6R327 1708 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms