RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
CCDC90B-219ENST00000534753 CHMP7Q8WUX9 453 aaPredicted RBP15.52■□□□□ 0.08
CCDC90B-219ENST00000534753 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
CCDC90B-219ENST00000534753 GAPVD1Q14C86 1478 aa15.51■□□□□ 0.07
CCDC90B-219ENST00000534753 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
CCDC90B-219ENST00000534753 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
CCDC90B-219ENST00000534753 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
CCDC90B-219ENST00000534753 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
CCDC90B-219ENST00000534753 ATF5Q9Y2D1 282 aaPredicted RBP15.49■□□□□ 0.07
CCDC90B-219ENST00000534753 ABCA10Q8WWZ4 1543 aa15.48■□□□□ 0.07
CCDC90B-219ENST00000534753 U3KPZ7 1027 aaPredicted RBP15.48■□□□□ 0.07
CCDC90B-219ENST00000534753 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
CCDC90B-219ENST00000534753 MAGI1Q96QZ7 1491 aaPredicted RBP15.45■□□□□ 0.06
CCDC90B-219ENST00000534753 RIMBP3CA6NJZ7 1639 aa15.43■□□□□ 0.06
CCDC90B-219ENST00000534753 RIMBP3BA6NNM3 1639 aa15.43■□□□□ 0.06
CCDC90B-219ENST00000534753 ABCA5Q8WWZ7 1642 aa15.43■□□□□ 0.06
CCDC90B-219ENST00000534753 RIMBP3Q9UFD9 1639 aa15.43■□□□□ 0.06
CCDC90B-219ENST00000534753 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
CCDC90B-219ENST00000534753 ARHGEF11O15085 1522 aa15.4■□□□□ 0.06
CCDC90B-219ENST00000534753 CYB5RLQ6IPT4 315 aa15.37■□□□□ 0.05
CCDC90B-219ENST00000534753 CLASP1Q7Z460 1538 aa15.32■□□□□ 0.04
CCDC90B-219ENST00000534753 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
CCDC90B-219ENST00000534753 GRIN2AQ12879 1464 aa15.31■□□□□ 0.04
CCDC90B-219ENST00000534753 FHAD1B1AJZ9 1412 aa15.3■□□□□ 0.04
CCDC90B-219ENST00000534753 ERICH3Q5RHP9 1530 aa15.3■□□□□ 0.04
CCDC90B-219ENST00000534753 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
CCDC90B-219ENST00000534753 ARAP1Q96P48 1450 aa15.27■□□□□ 0.03
CCDC90B-219ENST00000534753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
CCDC90B-219ENST00000534753 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
CCDC90B-219ENST00000534753 KIF27Q86VH2 1401 aa15.26■□□□□ 0.03
CCDC90B-219ENST00000534753 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-219ENST00000534753 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
CCDC90B-219ENST00000534753 FKBP8Q14318 412 aa15.22■□□□□ 0.03
CCDC90B-219ENST00000534753 IGF1RP08069 1367 aa15.21■□□□□ 0.02
CCDC90B-219ENST00000534753 NUP160Q12769 1436 aa15.2■□□□□ 0.02
CCDC90B-219ENST00000534753 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
CCDC90B-219ENST00000534753 ERCC6L2Q5T890 1561 aa15.16■□□□□ 0.02
CCDC90B-219ENST00000534753 CARMIL1Q5VZK9 1371 aa15.14■□□□□ 0.01
CCDC90B-219ENST00000534753 CUL7Q14999 1698 aa15.14■□□□□ 0.01
CCDC90B-219ENST00000534753 JPH4Q96JJ6 628 aa15.14■□□□□ 0.01
CCDC90B-219ENST00000534753 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
CCDC90B-219ENST00000534753 PRG4Q92954 1404 aaPredicted RBP15.12■□□□□ 0.01
CCDC90B-219ENST00000534753 SHROOM2Q13796 1616 aa15.1■□□□□ 0.01
CCDC90B-219ENST00000534753 TTBK1Q5TCY1 1321 aaPredicted RBP15.09■□□□□ 0.01
CCDC90B-219ENST00000534753 ZNF219Q9P2Y4 722 aaPredicted RBP15.05■□□□□ -0
CCDC90B-219ENST00000534753 KIAA0586Q9BVV6 1533 aa15.05■□□□□ -0
CCDC90B-219ENST00000534753 POTEHQ6S545 545 aa15.02■□□□□ -0
CCDC90B-219ENST00000534753 RAPGEF2Q9Y4G8 1499 aa15.01□□□□□ -0.01
CCDC90B-219ENST00000534753 FAM9AQ8IZU1 332 aaPredicted RBP14.99□□□□□ -0.01
CCDC90B-219ENST00000534753 IQGAP2Q13576 1575 aa14.96□□□□□ -0.01
CCDC90B-219ENST00000534753 NPM1P06748 294 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCDC90B-219ENST00000534753 APLP2Q06481 763 aa14.95□□□□□ -0.02
CCDC90B-219ENST00000534753 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
CCDC90B-219ENST00000534753 CARMIL2Q6F5E8 1435 aa14.94□□□□□ -0.02
CCDC90B-219ENST00000534753 PTPRGP23470 1445 aa14.92□□□□□ -0.02
CCDC90B-219ENST00000534753 TNIKQ9UKE5 1360 aa14.89□□□□□ -0.03
CCDC90B-219ENST00000534753 PRXQ9BXM0 1461 aa14.88□□□□□ -0.03
CCDC90B-219ENST00000534753 RANGAP1P46060 587 aaPredicted RBP14.87□□□□□ -0.03
CCDC90B-219ENST00000534753 ADCY10Q96PN6 1610 aa14.87□□□□□ -0.03
CCDC90B-219ENST00000534753 CTTNBP2Q8WZ74 1663 aa14.87□□□□□ -0.03
CCDC90B-219ENST00000534753 DISP1Q96F81 1524 aa14.86□□□□□ -0.03
CCDC90B-219ENST00000534753 UGGT2Q9NYU1 1516 aa14.83□□□□□ -0.04
CCDC90B-219ENST00000534753 P3H3Q8IVL6 736 aa14.83□□□□□ -0.04
CCDC90B-219ENST00000534753 RTN4Q9NQC3 1192 aaKnown RBP14.83□□□□□ -0.04
CCDC90B-219ENST00000534753 FAM69CQ0P6D2 419 aa14.82□□□□□ -0.04
CCDC90B-219ENST00000534753 EEA1Q15075 1411 aa14.82□□□□□ -0.04
CCDC90B-219ENST00000534753 KIAA0556O60303 1618 aa14.81□□□□□ -0.04
CCDC90B-219ENST00000534753 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
CCDC90B-219ENST00000534753 CAPN15O75808 1086 aa14.79□□□□□ -0.04
CCDC90B-219ENST00000534753 GOLGA3Q08378 1498 aa14.78□□□□□ -0.04
CCDC90B-219ENST00000534753 UACAQ9BZF9 1416 aa14.78□□□□□ -0.04
CCDC90B-219ENST00000534753 KIF13AQ9H1H9 1805 aa14.76□□□□□ -0.05
CCDC90B-219ENST00000534753 MAPKBP1O60336 1514 aa14.76□□□□□ -0.05
CCDC90B-219ENST00000534753 ABCC2Q92887 1545 aa14.76□□□□□ -0.05
CCDC90B-219ENST00000534753 ARID3CA6NKF2 412 aa14.74□□□□□ -0.05
CCDC90B-219ENST00000534753 ABCC10Q5T3U5 1492 aa14.74□□□□□ -0.05
CCDC90B-219ENST00000534753 UBTFP17480 764 aaKnown RBP14.73□□□□□ -0.05
CCDC90B-219ENST00000534753 UHRF1BP1LA0JNW5 1464 aa14.72□□□□□ -0.05
CCDC90B-219ENST00000534753 PLB1Q6P1J6 1458 aa14.72□□□□□ -0.05
CCDC90B-219ENST00000534753 POLA2Q14181 598 aa14.72□□□□□ -0.05
CCDC90B-219ENST00000534753 ASXL2Q76L83 1435 aa14.71□□□□□ -0.05
CCDC90B-219ENST00000534753 DIP2BQ9P265 1576 aa14.71□□□□□ -0.05
CCDC90B-219ENST00000534753 KIF21BO75037 1637 aa14.69□□□□□ -0.06
CCDC90B-219ENST00000534753 TSPOAP1O95153 1857 aa14.69□□□□□ -0.06
CCDC90B-219ENST00000534753 ZCCHC11Q5TAX3 1644 aaKnown RBP14.68□□□□□ -0.06
CCDC90B-219ENST00000534753 AMER1Q5JTC6 1135 aaPredicted RBP14.68□□□□□ -0.06
CCDC90B-219ENST00000534753 KDM5BQ9UGL1 1544 aa14.66□□□□□ -0.06
CCDC90B-219ENST00000534753 KCNH8Q96L42 1107 aa14.66□□□□□ -0.06
CCDC90B-219ENST00000534753 ABCB7O75027 752 aa14.65□□□□□ -0.06
CCDC90B-219ENST00000534753 ABCA8O94911 1581 aa14.64□□□□□ -0.07
CCDC90B-219ENST00000534753 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
CCDC90B-219ENST00000534753 FHOD3Q2V2M9 1422 aa14.64□□□□□ -0.07
CCDC90B-219ENST00000534753 SAMD9Q5K651 1589 aa14.64□□□□□ -0.07
CCDC90B-219ENST00000534753 EPRSP07814 1512 aaKnown RBP14.61□□□□□ -0.07
CCDC90B-219ENST00000534753 ATP1B4Q9UN42 357 aaPredicted RBP14.6□□□□□ -0.07
CCDC90B-219ENST00000534753 WDR7Q9Y4E6 1490 aa14.59□□□□□ -0.07
CCDC90B-219ENST00000534753 RAPGEF6Q8TEU7 1601 aa14.57□□□□□ -0.08
CCDC90B-219ENST00000534753 GLI2P10070 1586 aa14.56□□□□□ -0.08
CCDC90B-219ENST00000534753 KDM6BO15054 1643 aa14.56□□□□□ -0.08
CCDC90B-219ENST00000534753 ATP10BO94823 1461 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms