RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
GEN1-207ENST00000534669 PBRM1Q86U86 1689 aa13.2□□□□□ -0.3
GEN1-207ENST00000534669 SYNJ1O43426 1573 aa13.19□□□□□ -0.3
GEN1-207ENST00000534669 MAGI1Q96QZ7 1491 aaPredicted RBP13.18□□□□□ -0.3
GEN1-207ENST00000534669 GRIN2BQ13224 1484 aa13.17□□□□□ -0.3
GEN1-207ENST00000534669 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
GEN1-207ENST00000534669 CHMP7Q8WUX9 453 aaPredicted RBP13.15□□□□□ -0.3
GEN1-207ENST00000534669 ABCA5Q8WWZ7 1642 aa13.13□□□□□ -0.31
GEN1-207ENST00000534669 ERCC6L2Q5T890 1561 aa13.11□□□□□ -0.31
GEN1-207ENST00000534669 GAPVD1Q14C86 1478 aa13.11□□□□□ -0.31
GEN1-207ENST00000534669 SLC4A2P04920 1241 aa13.1□□□□□ -0.31
GEN1-207ENST00000534669 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
GEN1-207ENST00000534669 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.31
GEN1-207ENST00000534669 CEP170Q5SW79 1584 aa13.05□□□□□ -0.32
GEN1-207ENST00000534669 ADAMTS12P58397 1594 aa13.04□□□□□ -0.32
GEN1-207ENST00000534669 GRIN2AQ12879 1464 aa13.03□□□□□ -0.32
GEN1-207ENST00000534669 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
GEN1-207ENST00000534669 BIVM-ERCC5R4GMW8 1640 aa13□□□□□ -0.33
GEN1-207ENST00000534669 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
GEN1-207ENST00000534669 NUP160Q12769 1436 aa12.99□□□□□ -0.33
GEN1-207ENST00000534669 TOP2BQ02880 1626 aa12.98□□□□□ -0.33
GEN1-207ENST00000534669 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
GEN1-207ENST00000534669 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.34
GEN1-207ENST00000534669 KIF13AQ9H1H9 1805 aa12.95□□□□□ -0.34
GEN1-207ENST00000534669 FHAD1B1AJZ9 1412 aa12.93□□□□□ -0.34
GEN1-207ENST00000534669 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
GEN1-207ENST00000534669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.88□□□□□ -0.35
GEN1-207ENST00000534669 HNRNPUL2Q1KMD3 747 aaKnown RBP12.88□□□□□ -0.35
GEN1-207ENST00000534669 RUSC2Q8N2Y8 1516 aa12.87□□□□□ -0.35
GEN1-207ENST00000534669 PRG4Q92954 1404 aaPredicted RBP12.87□□□□□ -0.35
GEN1-207ENST00000534669 APLP2Q06481 763 aa12.84□□□□□ -0.35
GEN1-207ENST00000534669 ADCY10Q96PN6 1610 aa12.81□□□□□ -0.36
GEN1-207ENST00000534669 JPH4Q96JJ6 628 aa12.81□□□□□ -0.36
GEN1-207ENST00000534669 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
GEN1-207ENST00000534669 MYCNP04198 464 aaPredicted RBP12.79□□□□□ -0.36
GEN1-207ENST00000534669 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
GEN1-207ENST00000534669 DIP2BQ9P265 1576 aa12.78□□□□□ -0.36
GEN1-207ENST00000534669 CAPN15O75808 1086 aa12.78□□□□□ -0.36
GEN1-207ENST00000534669 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
GEN1-207ENST00000534669 ABCC10Q5T3U5 1492 aa12.77□□□□□ -0.37
GEN1-207ENST00000534669 MAPKBP1O60336 1514 aa12.76□□□□□ -0.37
GEN1-207ENST00000534669 FAM69CQ0P6D2 419 aa12.74□□□□□ -0.37
GEN1-207ENST00000534669 TSPOAP1O95153 1857 aa12.74□□□□□ -0.37
GEN1-207ENST00000534669 IGF1RP08069 1367 aa12.71□□□□□ -0.37
GEN1-207ENST00000534669 KIAA0586Q9BVV6 1533 aa12.71□□□□□ -0.38
GEN1-207ENST00000534669 CUL7Q14999 1698 aa12.7□□□□□ -0.38
GEN1-207ENST00000534669 ZNF219Q9P2Y4 722 aaPredicted RBP12.68□□□□□ -0.38
GEN1-207ENST00000534669 KDM6BO15054 1643 aa12.68□□□□□ -0.38
GEN1-207ENST00000534669 DSG3P32926 999 aa12.67□□□□□ -0.38
GEN1-207ENST00000534669 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
GEN1-207ENST00000534669 PPRC1Q5VV67 1664 aaKnown RBP12.65□□□□□ -0.38
GEN1-207ENST00000534669 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.38
GEN1-207ENST00000534669 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
GEN1-207ENST00000534669 TTBK1Q5TCY1 1321 aaPredicted RBP12.62□□□□□ -0.39
GEN1-207ENST00000534669 PTPRGP23470 1445 aa12.61□□□□□ -0.39
GEN1-207ENST00000534669 CARMIL1Q5VZK9 1371 aa12.6□□□□□ -0.39
GEN1-207ENST00000534669 ZBTB22O15209 634 aa12.6□□□□□ -0.39
GEN1-207ENST00000534669 IQGAP2Q13576 1575 aa12.6□□□□□ -0.39
GEN1-207ENST00000534669 ABCC2Q92887 1545 aa12.59□□□□□ -0.39
GEN1-207ENST00000534669 DISP1Q96F81 1524 aa12.58□□□□□ -0.4
GEN1-207ENST00000534669 ASXL2Q76L83 1435 aa12.58□□□□□ -0.4
GEN1-207ENST00000534669 TNIKQ9UKE5 1360 aa12.57□□□□□ -0.4
GEN1-207ENST00000534669 GLI2P10070 1586 aa12.56□□□□□ -0.4
GEN1-207ENST00000534669 UHRF1BP1LA0JNW5 1464 aa12.54□□□□□ -0.4
GEN1-207ENST00000534669 COL17A1Q9UMD9 1497 aaPredicted RBP12.54□□□□□ -0.4
GEN1-207ENST00000534669 CARMIL2Q6F5E8 1435 aa12.54□□□□□ -0.4
GEN1-207ENST00000534669 ZCCHC11Q5TAX3 1644 aaKnown RBP12.53□□□□□ -0.4
GEN1-207ENST00000534669 MAP3K4Q9Y6R4 1608 aa12.53□□□□□ -0.4
GEN1-207ENST00000534669 UACAQ9BZF9 1416 aa12.53□□□□□ -0.4
GEN1-207ENST00000534669 PLB1Q6P1J6 1458 aa12.53□□□□□ -0.4
GEN1-207ENST00000534669 EPRSP07814 1512 aaKnown RBP12.51□□□□□ -0.41
GEN1-207ENST00000534669 UGGT2Q9NYU1 1516 aa12.51□□□□□ -0.41
GEN1-207ENST00000534669 KIAA0556O60303 1618 aa12.51□□□□□ -0.41
GEN1-207ENST00000534669 ADGRL1O94910 1474 aa12.5□□□□□ -0.41
GEN1-207ENST00000534669 KDM5BQ9UGL1 1544 aa12.5□□□□□ -0.41
GEN1-207ENST00000534669 RAPGEF2Q9Y4G8 1499 aa12.47□□□□□ -0.41
GEN1-207ENST00000534669 ABCB7O75027 752 aa12.47□□□□□ -0.41
GEN1-207ENST00000534669 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
GEN1-207ENST00000534669 WDR7Q9Y4E6 1490 aa12.41□□□□□ -0.42
GEN1-207ENST00000534669 ABCA8O94911 1581 aa12.41□□□□□ -0.42
GEN1-207ENST00000534669 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
GEN1-207ENST00000534669 ILDR1Q86SU0 546 aaPredicted RBP12.41□□□□□ -0.42
GEN1-207ENST00000534669 TEX14Q8IWB6 1497 aa12.4□□□□□ -0.42
GEN1-207ENST00000534669 HECW2Q9P2P5 1572 aa12.4□□□□□ -0.42
GEN1-207ENST00000534669 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
GEN1-207ENST00000534669 CFAP43Q8NDM7 1665 aa12.38□□□□□ -0.43
GEN1-207ENST00000534669 KIF21BO75037 1637 aa12.36□□□□□ -0.43
GEN1-207ENST00000534669 POLA2Q14181 598 aa12.35□□□□□ -0.43
GEN1-207ENST00000534669 MAGI3Q5TCQ9 1506 aa12.35□□□□□ -0.43
GEN1-207ENST00000534669 CD109Q6YHK3 1445 aa12.34□□□□□ -0.43
GEN1-207ENST00000534669 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
GEN1-207ENST00000534669 KCNH8Q96L42 1107 aa12.33□□□□□ -0.44
GEN1-207ENST00000534669 GOLGA3Q08378 1498 aa12.33□□□□□ -0.44
GEN1-207ENST00000534669 ARID3CA6NKF2 412 aa12.31□□□□□ -0.44
GEN1-207ENST00000534669 ATP10BO94823 1461 aa12.28□□□□□ -0.44
GEN1-207ENST00000534669 P3H3Q8IVL6 736 aa12.27□□□□□ -0.45
GEN1-207ENST00000534669 ABCA9Q8IUA7 1624 aa12.26□□□□□ -0.45
GEN1-207ENST00000534669 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
GEN1-207ENST00000534669 ARAP3Q8WWN8 1544 aa12.26□□□□□ -0.45
GEN1-207ENST00000534669 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms