RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 RRP7BPQ9NSQ0 103 aa11.89□□□□□ -0.51
CTNND1-237ENST00000534579 ANP32AP39687 249 aaKnown RBP11.89□□□□□ -0.51
CTNND1-237ENST00000534579 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
CTNND1-237ENST00000534579 KDM2AQ9Y2K7 1162 aa11.88□□□□□ -0.51
CTNND1-237ENST00000534579 MYO15BQ96JP2 1530 aa11.87□□□□□ -0.51
CTNND1-237ENST00000534579 CEP164Q9UPV0 1460 aa11.87□□□□□ -0.51
CTNND1-237ENST00000534579 UPF2Q9HAU5 1272 aaKnown RBP11.86□□□□□ -0.51
CTNND1-237ENST00000534579 MROH2BQ7Z745 1585 aa11.85□□□□□ -0.51
CTNND1-237ENST00000534579 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
CTNND1-237ENST00000534579 ARXQ96QS3 562 aa11.84□□□□□ -0.51
CTNND1-237ENST00000534579 CFDP1Q9UEE9 299 aaPredicted RBP11.83□□□□□ -0.52
CTNND1-237ENST00000534579 CUX2O14529 1486 aa11.83□□□□□ -0.52
CTNND1-237ENST00000534579 SENP3Q9H4L4 574 aaPredicted RBP11.83□□□□□ -0.52
CTNND1-237ENST00000534579 NCBP3Q53F19 620 aaKnown RBP11.82□□□□□ -0.52
CTNND1-237ENST00000534579 EIF4G1Q04637 1599 aaKnown RBP11.82□□□□□ -0.52
CTNND1-237ENST00000534579 ARID4BQ4LE39 1312 aaPredicted RBP11.82□□□□□ -0.52
CTNND1-237ENST00000534579 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
CTNND1-237ENST00000534579 CCDC88BA6NC98 1476 aa11.8□□□□□ -0.52
CTNND1-237ENST00000534579 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
CTNND1-237ENST00000534579 NPHP1O15259 732 aa11.8□□□□□ -0.52
CTNND1-237ENST00000534579 CARMIL1Q5VZK9 1371 aa11.79□□□□□ -0.52
CTNND1-237ENST00000534579 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
CTNND1-237ENST00000534579 EIF5BO60841 1220 aaKnown RBP11.79□□□□□ -0.52
CTNND1-237ENST00000534579 PPP1R15AO75807 674 aaPredicted RBP11.79□□□□□ -0.52
CTNND1-237ENST00000534579 GLIPR1L2Q4G1C9 344 aa11.77□□□□□ -0.53
CTNND1-237ENST00000534579 FAM9BQ8IZU0 186 aa11.75□□□□□ -0.53
CTNND1-237ENST00000534579 SOGA1O94964 1423 aa11.75□□□□□ -0.53
CTNND1-237ENST00000534579 MYH16Q9H6N6 1097 aa11.75□□□□□ -0.53
CTNND1-237ENST00000534579 RGL3Q3MIN7 710 aa11.74□□□□□ -0.53
CTNND1-237ENST00000534579 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
CTNND1-237ENST00000534579 SALL2Q9Y467 1007 aaPredicted RBP11.73□□□□□ -0.53
CTNND1-237ENST00000534579 WIZO95785 1651 aa11.72□□□□□ -0.53
CTNND1-237ENST00000534579 TMC1Q8TDI8 760 aa11.72□□□□□ -0.53
CTNND1-237ENST00000534579 HIRIP3Q9BW71 556 aaPredicted RBP11.72□□□□□ -0.53
CTNND1-237ENST00000534579 HNRNPUQ00839 825 aaKnown RBP eCLIP11.71□□□□□ -0.53
CTNND1-237ENST00000534579 FHAD1B1AJZ9 1412 aa11.71□□□□□ -0.54
CTNND1-237ENST00000534579 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.54
CTNND1-237ENST00000534579 FKBP8Q14318 412 aa11.71□□□□□ -0.54
CTNND1-237ENST00000534579 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
CTNND1-237ENST00000534579 TDRD9Q8NDG6 1382 aaKnown RBP11.7□□□□□ -0.54
CTNND1-237ENST00000534579 TOP2AP11388 1531 aaKnown RBP11.69□□□□□ -0.54
CTNND1-237ENST00000534579 EIF4G2P78344 907 aaKnown RBP eCLIP11.69□□□□□ -0.54
CTNND1-237ENST00000534579 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.69□□□□□ -0.54
CTNND1-237ENST00000534579 WDR43Q15061 677 aaKnown RBP eCLIP11.69□□□□□ -0.543e-9■■■□□ 15.6
CTNND1-237ENST00000534579 CLSTN1O94985 981 aa11.68□□□□□ -0.54
CTNND1-237ENST00000534579 MIER1Q8N108 512 aa11.67□□□□□ -0.54
CTNND1-237ENST00000534579 CADPSQ9ULU8 1353 aa11.66□□□□□ -0.54
CTNND1-237ENST00000534579 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
CTNND1-237ENST00000534579 NCLP19338 710 aaKnown RBP11.65□□□□□ -0.54
CTNND1-237ENST00000534579 ZRSR1Q15695 479 aaKnown RBP11.65□□□□□ -0.54
CTNND1-237ENST00000534579 CARMIL2Q6F5E8 1435 aa11.65□□□□□ -0.54
CTNND1-237ENST00000534579 MRS2Q9HD23 443 aa11.65□□□□□ -0.54
CTNND1-237ENST00000534579 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
CTNND1-237ENST00000534579 SMARCA4P51532 1647 aa11.62□□□□□ -0.55
CTNND1-237ENST00000534579 LMOD2Q6P5Q4 547 aa11.62□□□□□ -0.55
CTNND1-237ENST00000534579 TPRNQ4KMQ1 711 aa11.61□□□□□ -0.55
CTNND1-237ENST00000534579 MLECQ14165 292 aa11.61□□□□□ -0.55
CTNND1-237ENST00000534579 CARD11Q9BXL7 1154 aa11.59□□□□□ -0.55
CTNND1-237ENST00000534579 KANK1Q14678 1352 aa11.57□□□□□ -0.56
CTNND1-237ENST00000534579 GOLGA2Q08379 1002 aa11.57□□□□□ -0.56
CTNND1-237ENST00000534579 CDCA8Q53HL2 280 aa11.56□□□□□ -0.56
CTNND1-237ENST00000534579 PRM3Q9NNZ6 103 aa11.56□□□□□ -0.56
CTNND1-237ENST00000534579 POGKQ9P215 609 aa11.56□□□□□ -0.56
CTNND1-237ENST00000534579 SIN3AQ96ST3 1273 aa11.56□□□□□ -0.56
CTNND1-237ENST00000534579 ISY1Q9ULR0 285 aaKnown RBP11.55□□□□□ -0.56
CTNND1-237ENST00000534579 ARHGAP35Q9NRY4 1499 aa11.55□□□□□ -0.56
CTNND1-237ENST00000534579 VPS8Q8N3P4 1428 aa11.54□□□□□ -0.56
CTNND1-237ENST00000534579 KNSTRNQ9Y448 316 aa11.54□□□□□ -0.56
CTNND1-237ENST00000534579 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
CTNND1-237ENST00000534579 FMN1Q68DA7 1419 aa11.53□□□□□ -0.56
CTNND1-237ENST00000534579 GGT6Q6P531 493 aa11.53□□□□□ -0.56
CTNND1-237ENST00000534579 ANP32EQ9BTT0 268 aa11.53□□□□□ -0.56
CTNND1-237ENST00000534579 PPM1GO15355 546 aaPredicted RBP11.53□□□□□ -0.56
CTNND1-237ENST00000534579 CASC1Q6TDU7 716 aa11.52□□□□□ -0.57
CTNND1-237ENST00000534579 RAPGEF2Q9Y4G8 1499 aa11.52□□□□□ -0.57
CTNND1-237ENST00000534579 CFAP53Q96M91 514 aa11.51□□□□□ -0.57
CTNND1-237ENST00000534579 TRIM44Q96DX7 344 aaPredicted RBP11.51□□□□□ -0.57
CTNND1-237ENST00000534579 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
CTNND1-237ENST00000534579 CCDC136Q96JN2 1154 aa11.5□□□□□ -0.57
CTNND1-237ENST00000534579 NBR1Q14596 966 aa11.5□□□□□ -0.57
CTNND1-237ENST00000534579 DCAF11Q8TEB1 546 aa11.5□□□□□ -0.57
CTNND1-237ENST00000534579 EFCAB2Q5VUJ9 269 aa11.5□□□□□ -0.57
CTNND1-237ENST00000534579 PTMAP06454 111 aaKnown RBP11.49□□□□□ -0.57
CTNND1-237ENST00000534579 NAP1L2Q9ULW6 460 aaPredicted RBP11.49□□□□□ -0.57
CTNND1-237ENST00000534579 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
CTNND1-237ENST00000534579 FHOD3Q2V2M9 1422 aa11.48□□□□□ -0.57
CTNND1-237ENST00000534579 GOLGA6L22H0YM25 854 aa11.47□□□□□ -0.57
CTNND1-237ENST00000534579 HDGFP51858 240 aaKnown RBP11.47□□□□□ -0.57
CTNND1-237ENST00000534579 KRI1Q8N9T8 703 aaKnown RBP11.47□□□□□ -0.57
CTNND1-237ENST00000534579 OS9Q13438 667 aaPredicted RBP11.46□□□□□ -0.57
CTNND1-237ENST00000534579 LAS1LQ9Y4W2 734 aaKnown RBP11.46□□□□□ -0.57
CTNND1-237ENST00000534579 SENP3-EIF4A1A0A087X0R7 540 aa11.46□□□□□ -0.58
CTNND1-237ENST00000534579 SETD5Q9C0A6 1442 aa11.45□□□□□ -0.58
CTNND1-237ENST00000534579 FGD1P98174 961 aa11.45□□□□□ -0.58
CTNND1-237ENST00000534579 PKD2Q13563 968 aa11.45□□□□□ -0.58
CTNND1-237ENST00000534579 TNNT2P45379 298 aaPredicted RBP11.44□□□□□ -0.58
CTNND1-237ENST00000534579 DNTTIP2Q5QJE6 756 aaKnown RBP11.44□□□□□ -0.58
CTNND1-237ENST00000534579 IRX6P78412 446 aaPredicted RBP11.44□□□□□ -0.58
CTNND1-237ENST00000534579 GOLGA6L6A8MZA4 724 aa11.43□□□□□ -0.58
CTNND1-237ENST00000534579 BECN1Q14457 450 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms