RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 ATF5Q9Y2D1 282 aaPredicted RBP18.41■□□□□ 0.54
CCDC90B-218ENST00000533761 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
CCDC90B-218ENST00000533761 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.53
CCDC90B-218ENST00000533761 TOPBP1Q92547 1522 aa18.39■□□□□ 0.53
CCDC90B-218ENST00000533761 CUX2O14529 1486 aa18.37■□□□□ 0.53
CCDC90B-218ENST00000533761 CUX1P39880 1505 aa18.35■□□□□ 0.53
CCDC90B-218ENST00000533761 TOP2BQ02880 1626 aa18.29■□□□□ 0.52
CCDC90B-218ENST00000533761 SYNJ1O43426 1573 aa18.28■□□□□ 0.52
CCDC90B-218ENST00000533761 BIVM-ERCC5R4GMW8 1640 aa18.27■□□□□ 0.51
CCDC90B-218ENST00000533761 POLA1P09884 1462 aaPredicted RBP18.26■□□□□ 0.51
CCDC90B-218ENST00000533761 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
CCDC90B-218ENST00000533761 TRIM41Q8WV44 630 aa18.23■□□□□ 0.51
CCDC90B-218ENST00000533761 SOGA1O94964 1423 aa18.22■□□□□ 0.51
CCDC90B-218ENST00000533761 IFT140Q96RY7 1462 aa18.21■□□□□ 0.51
CCDC90B-218ENST00000533761 LHX8Q68G74 356 aa18.17■□□□□ 0.5
CCDC90B-218ENST00000533761 RAD54L2Q9Y4B4 1467 aa18.17■□□□□ 0.5
CCDC90B-218ENST00000533761 TARBP1Q13395 1621 aaKnown RBP18.15■□□□□ 0.5
CCDC90B-218ENST00000533761 PRKAR2AP13861 404 aaKnown RBP18.13■□□□□ 0.49
CCDC90B-218ENST00000533761 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
CCDC90B-218ENST00000533761 C19orf67A6NJJ6 358 aa18.09■□□□□ 0.49
CCDC90B-218ENST00000533761 FOXD4L1Q9NU39 408 aa18.09■□□□□ 0.49
CCDC90B-218ENST00000533761 ZNF608Q9ULD9 1512 aaPredicted RBP18.08■□□□□ 0.48
CCDC90B-218ENST00000533761 TDRD9Q8NDG6 1382 aaKnown RBP18.08■□□□□ 0.48
CCDC90B-218ENST00000533761 GABBR2O75899 941 aa18.06■□□□□ 0.48
CCDC90B-218ENST00000533761 WDR97A6NE52 1622 aa18.05■□□□□ 0.48
CCDC90B-218ENST00000533761 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.48
CCDC90B-218ENST00000533761 SPDYE2BA6NHP3 402 aa18.02■□□□□ 0.48
CCDC90B-218ENST00000533761 SPDYE6P0CI01 402 aa18.02■□□□□ 0.48
CCDC90B-218ENST00000533761 SPDYE2Q495Y8 402 aa18.02■□□□□ 0.48
CCDC90B-218ENST00000533761 EIF4G3O43432 1585 aaKnown RBP18.02■□□□□ 0.47
CCDC90B-218ENST00000533761 GAPVD1Q14C86 1478 aa18■□□□□ 0.47
CCDC90B-218ENST00000533761 KIF27Q86VH2 1401 aa18■□□□□ 0.47
CCDC90B-218ENST00000533761 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
CCDC90B-218ENST00000533761 GRIN2BQ13224 1484 aa17.96■□□□□ 0.47
CCDC90B-218ENST00000533761 SPDYE1Q8NFV5 336 aaPredicted RBP17.96■□□□□ 0.46
CCDC90B-218ENST00000533761 CLEC11AQ9Y240 323 aa17.95■□□□□ 0.46
CCDC90B-218ENST00000533761 EEA1Q15075 1411 aa17.91■□□□□ 0.46
CCDC90B-218ENST00000533761 ERICH3Q5RHP9 1530 aa17.9■□□□□ 0.46
CCDC90B-218ENST00000533761 PBRM1Q86U86 1689 aa17.89■□□□□ 0.46
CCDC90B-218ENST00000533761 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
CCDC90B-218ENST00000533761 RUSC2Q8N2Y8 1516 aa17.87■□□□□ 0.45
CCDC90B-218ENST00000533761 IGF1RP08069 1367 aa17.87■□□□□ 0.45
CCDC90B-218ENST00000533761 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
CCDC90B-218ENST00000533761 FBLN2P98095 1184 aa17.83■□□□□ 0.44
CCDC90B-218ENST00000533761 CHMP7Q8WUX9 453 aaPredicted RBP17.83■□□□□ 0.44
CCDC90B-218ENST00000533761 FHAD1B1AJZ9 1412 aa17.81■□□□□ 0.44
CCDC90B-218ENST00000533761 FAM9AQ8IZU1 332 aaPredicted RBP17.81■□□□□ 0.44
CCDC90B-218ENST00000533761 CSRNP3Q8WYN3 585 aa17.81■□□□□ 0.44
CCDC90B-218ENST00000533761 PLSCR2Q9NRY7 297 aa17.81■□□□□ 0.44
CCDC90B-218ENST00000533761 SYNJ2O15056 1496 aa17.81■□□□□ 0.44
CCDC90B-218ENST00000533761 SLC4A1APQ9BWU0 796 aaKnown RBP17.79■□□□□ 0.44
CCDC90B-218ENST00000533761 CUL7Q14999 1698 aa17.79■□□□□ 0.44
CCDC90B-218ENST00000533761 CARMIL1Q5VZK9 1371 aa17.78■□□□□ 0.44
CCDC90B-218ENST00000533761 ADAMTS12P58397 1594 aa17.78■□□□□ 0.44
CCDC90B-218ENST00000533761 CHD1O14646 1710 aa17.72■□□□□ 0.43
CCDC90B-218ENST00000533761 GRIN2AQ12879 1464 aa17.72■□□□□ 0.43
CCDC90B-218ENST00000533761 PRXQ9BXM0 1461 aa17.7■□□□□ 0.42
CCDC90B-218ENST00000533761 RAPGEF2Q9Y4G8 1499 aa17.7■□□□□ 0.42
CCDC90B-218ENST00000533761 CHADLQ6NUI6 762 aa17.68■□□□□ 0.42
CCDC90B-218ENST00000533761 ATXN8OSP0DMR3 200 aa17.66■□□□□ 0.42
CCDC90B-218ENST00000533761 SSUH2Q9Y2M2 353 aa17.66■□□□□ 0.42
CCDC90B-218ENST00000533761 POTEIP0CG38 1075 aa17.65■□□□□ 0.42
CCDC90B-218ENST00000533761 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
CCDC90B-218ENST00000533761 NUP160Q12769 1436 aa17.62■□□□□ 0.41
CCDC90B-218ENST00000533761 KIF21BO75037 1637 aa17.61■□□□□ 0.41
CCDC90B-218ENST00000533761 CEP170Q5SW79 1584 aa17.58■□□□□ 0.41
CCDC90B-218ENST00000533761 GOLGA3Q08378 1498 aa17.58■□□□□ 0.4
CCDC90B-218ENST00000533761 LOC105371045A0A1W2PR82 267 aa17.55■□□□□ 0.4
CCDC90B-218ENST00000533761 KIAA0586Q9BVV6 1533 aa17.55■□□□□ 0.4
CCDC90B-218ENST00000533761 UBTFP17480 764 aaKnown RBP17.54■□□□□ 0.4
CCDC90B-218ENST00000533761 CLASP1Q7Z460 1538 aa17.54■□□□□ 0.4
CCDC90B-218ENST00000533761 PRR29P0C7W0 189 aa17.53■□□□□ 0.4
CCDC90B-218ENST00000533761 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
CCDC90B-218ENST00000533761 CLCN6P51797 869 aa17.52■□□□□ 0.39
CCDC90B-218ENST00000533761 MKRN4PQ13434 485 aaPredicted RBP17.52■□□□□ 0.39
CCDC90B-218ENST00000533761 CD44P16070 742 aaKnown RBP17.49■□□□□ 0.39
CCDC90B-218ENST00000533761 JPH4Q96JJ6 628 aa17.49■□□□□ 0.39
CCDC90B-218ENST00000533761 CTTNBP2Q8WZ74 1663 aa17.48■□□□□ 0.39
CCDC90B-218ENST00000533761 IQGAP2Q13576 1575 aa17.48■□□□□ 0.39
CCDC90B-218ENST00000533761 DNAJC5Q9H3Z4 198 aa17.48■□□□□ 0.39
CCDC90B-218ENST00000533761 TNIKQ9UKE5 1360 aa17.46■□□□□ 0.39
CCDC90B-218ENST00000533761 ZBTB22O15209 634 aa17.45■□□□□ 0.38
CCDC90B-218ENST00000533761 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
CCDC90B-218ENST00000533761 PRG4Q92954 1404 aaPredicted RBP17.41■□□□□ 0.38
CCDC90B-218ENST00000533761 DCBLD2Q96PD2 775 aa17.39■□□□□ 0.37
CCDC90B-218ENST00000533761 UGGT2Q9NYU1 1516 aa17.39■□□□□ 0.37
CCDC90B-218ENST00000533761 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
CCDC90B-218ENST00000533761 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
CCDC90B-218ENST00000533761 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
CCDC90B-218ENST00000533761 FARP1Q9Y4F1 1045 aaPredicted RBP17.36■□□□□ 0.37
CCDC90B-218ENST00000533761 CEP162Q5TB80 1403 aa17.33■□□□□ 0.37
CCDC90B-218ENST00000533761 DISP1Q96F81 1524 aa17.32■□□□□ 0.36
CCDC90B-218ENST00000533761 RIMBP3CA6NJZ7 1639 aa17.31■□□□□ 0.36
CCDC90B-218ENST00000533761 RIMBP3BA6NNM3 1639 aa17.31■□□□□ 0.36
CCDC90B-218ENST00000533761 RIMBP3Q9UFD9 1639 aa17.31■□□□□ 0.36
CCDC90B-218ENST00000533761 ERCC6L2Q5T890 1561 aa17.31■□□□□ 0.36
CCDC90B-218ENST00000533761 KIAA0556O60303 1618 aa17.29■□□□□ 0.36
CCDC90B-218ENST00000533761 EFCAB5A4FU69 1503 aa17.29■□□□□ 0.36
CCDC90B-218ENST00000533761 P3H3Q8IVL6 736 aa17.28■□□□□ 0.36
CCDC90B-218ENST00000533761 SAMD9Q5K651 1589 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms