RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 TNIKQ9UKE5 1360 aa15.55■□□□□ 0.08
AMBRA1-211ENST00000533727 CHIC2Q9UKJ5 165 aa15.55■□□□□ 0.08
AMBRA1-211ENST00000533727 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
AMBRA1-211ENST00000533727 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
AMBRA1-211ENST00000533727 PPP1R15AO75807 674 aaPredicted RBP15.52■□□□□ 0.07
AMBRA1-211ENST00000533727 CEP162Q5TB80 1403 aa15.5■□□□□ 0.07
AMBRA1-211ENST00000533727 ZNF316A6NFI3 1004 aaPredicted RBP15.47■□□□□ 0.07
AMBRA1-211ENST00000533727 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
AMBRA1-211ENST00000533727 CCNB3Q8WWL7 1395 aa15.45■□□□□ 0.06
AMBRA1-211ENST00000533727 ZBTB47Q9UFB7 747 aaPredicted RBP15.45■□□□□ 0.06
AMBRA1-211ENST00000533727 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
AMBRA1-211ENST00000533727 SLC24A1O60721 1099 aa15.43■□□□□ 0.06
AMBRA1-211ENST00000533727 NCAPD3P42695 1498 aa15.42■□□□□ 0.06
AMBRA1-211ENST00000533727 WIZO95785 1651 aa15.39■□□□□ 0.05
AMBRA1-211ENST00000533727 KANK1Q14678 1352 aa15.39■□□□□ 0.05
AMBRA1-211ENST00000533727 HDGFP51858 240 aaKnown RBP15.38■□□□□ 0.05
AMBRA1-211ENST00000533727 C14orf37Q86TY3 774 aa15.37■□□□□ 0.05
AMBRA1-211ENST00000533727 FMN1Q68DA7 1419 aa15.36■□□□□ 0.05
AMBRA1-211ENST00000533727 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
AMBRA1-211ENST00000533727 RRP7BPQ9NSQ0 103 aa15.36■□□□□ 0.05
AMBRA1-211ENST00000533727 CLSPNQ9HAW4 1339 aa15.35■□□□□ 0.05
AMBRA1-211ENST00000533727 EFCAB2Q5VUJ9 269 aa15.33■□□□□ 0.04
AMBRA1-211ENST00000533727 CANXP27824 592 aaKnown RBP15.31■□□□□ 0.04
AMBRA1-211ENST00000533727 RAPGEF2Q9Y4G8 1499 aa15.3■□□□□ 0.04
AMBRA1-211ENST00000533727 KDM2AQ9Y2K7 1162 aa15.29■□□□□ 0.04
AMBRA1-211ENST00000533727 CDCA8Q53HL2 280 aa15.28■□□□□ 0.04
AMBRA1-211ENST00000533727 JPH4Q96JJ6 628 aa15.27■□□□□ 0.04
AMBRA1-211ENST00000533727 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
AMBRA1-211ENST00000533727 RSPH4AQ5TD94 716 aa15.23■□□□□ 0.03
AMBRA1-211ENST00000533727 HAP1P54257 671 aaPredicted RBP15.21■□□□□ 0.03
AMBRA1-211ENST00000533727 ARHGAP35Q9NRY4 1499 aa15.19■□□□□ 0.02
AMBRA1-211ENST00000533727 EIF4G2P78344 907 aaKnown RBP eCLIP15.18■□□□□ 0.026e-7■■■□□ 18.8
AMBRA1-211ENST00000533727 EIF5BO60841 1220 aaKnown RBP15.18■□□□□ 0.02
AMBRA1-211ENST00000533727 PTPRGP23470 1445 aa15.17■□□□□ 0.02
AMBRA1-211ENST00000533727 VPS8Q8N3P4 1428 aa15.17■□□□□ 0.02
AMBRA1-211ENST00000533727 GAPVD1Q14C86 1478 aa15.17■□□□□ 0.02
AMBRA1-211ENST00000533727 HMGXB3Q12766 1538 aa15.17■□□□□ 0.02
AMBRA1-211ENST00000533727 NPM2Q86SE8 214 aaKnown RBP15.17■□□□□ 0.02
AMBRA1-211ENST00000533727 MLECQ14165 292 aa15.16■□□□□ 0.02
AMBRA1-211ENST00000533727 RGL3Q3MIN7 710 aa15.15■□□□□ 0.02
AMBRA1-211ENST00000533727 CCDC18Q5T9S5 1454 aa15.15■□□□□ 0.02
AMBRA1-211ENST00000533727 CC2D2AQ9P2K1 1620 aa15.15■□□□□ 0.02
AMBRA1-211ENST00000533727 POGKQ9P215 609 aa15.14■□□□□ 0.01
AMBRA1-211ENST00000533727 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
AMBRA1-211ENST00000533727 WDR43Q15061 677 aaKnown RBP eCLIP15.14■□□□□ 0.01
AMBRA1-211ENST00000533727 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
AMBRA1-211ENST00000533727 ANP32AP39687 249 aaKnown RBP15.12■□□□□ 0.01
AMBRA1-211ENST00000533727 CYB5RLQ6IPT4 315 aa15.11■□□□□ 0.01
AMBRA1-211ENST00000533727 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
AMBRA1-211ENST00000533727 GGT6Q6P531 493 aa15.1■□□□□ 0.01
AMBRA1-211ENST00000533727 TMC1Q8TDI8 760 aa15.1■□□□□ 0.01
AMBRA1-211ENST00000533727 CFAP53Q96M91 514 aa15.09■□□□□ 0.01
AMBRA1-211ENST00000533727 GLIPR1L2Q4G1C9 344 aa15.08■□□□□ 0.01
AMBRA1-211ENST00000533727 IFT140Q96RY7 1462 aa15.08■□□□□ 0
AMBRA1-211ENST00000533727 GRIN2BQ13224 1484 aa15.08■□□□□ 0
AMBRA1-211ENST00000533727 SPAG9O60271 1321 aaKnown RBP15.07■□□□□ 0
AMBRA1-211ENST00000533727 CFTRP13569 1480 aa15.07■□□□□ 0
AMBRA1-211ENST00000533727 ZBTB7CA1YPR0 619 aa15.04■□□□□ -0
AMBRA1-211ENST00000533727 CARD11Q9BXL7 1154 aa15.04■□□□□ -0
AMBRA1-211ENST00000533727 FHOD3Q2V2M9 1422 aa15.02■□□□□ -0
AMBRA1-211ENST00000533727 A0A0G2JS52 829 aa15.02■□□□□ -0
AMBRA1-211ENST00000533727 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.02■□□□□ -0
AMBRA1-211ENST00000533727 EID1Q9Y6B2 187 aa15.01□□□□□ -0.01
AMBRA1-211ENST00000533727 TIMELESSQ9UNS1 1208 aa15.01□□□□□ -0.01
AMBRA1-211ENST00000533727 KNSTRNQ9Y448 316 aa15.01□□□□□ -0.01
AMBRA1-211ENST00000533727 DDX10Q13206 875 aaKnown RBP15□□□□□ -0.01
AMBRA1-211ENST00000533727 KIF3BO15066 747 aa14.98□□□□□ -0.01
AMBRA1-211ENST00000533727 RAD54L2Q9Y4B4 1467 aa14.98□□□□□ -0.01
AMBRA1-211ENST00000533727 SENP3Q9H4L4 574 aaPredicted RBP14.97□□□□□ -0.01
AMBRA1-211ENST00000533727 LMOD2Q6P5Q4 547 aa14.97□□□□□ -0.01
AMBRA1-211ENST00000533727 IGF1RP08069 1367 aa14.96□□□□□ -0.01
AMBRA1-211ENST00000533727 FKBP8Q14318 412 aa14.96□□□□□ -0.02
AMBRA1-211ENST00000533727 NUDCQ9Y266 331 aa14.96□□□□□ -0.02
AMBRA1-211ENST00000533727 WASHC2CQ9Y4E1 1318 aa14.95□□□□□ -0.02
AMBRA1-211ENST00000533727 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.025e-7■■■■■ 29
AMBRA1-211ENST00000533727 SETD5Q9C0A6 1442 aa14.95□□□□□ -0.02
AMBRA1-211ENST00000533727 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
AMBRA1-211ENST00000533727 NUP155O75694 1391 aa14.93□□□□□ -0.02
AMBRA1-211ENST00000533727 TMF1P82094 1093 aa14.93□□□□□ -0.02
AMBRA1-211ENST00000533727 MRS2Q9HD23 443 aa14.93□□□□□ -0.02
AMBRA1-211ENST00000533727 FAM69CQ0P6D2 419 aa14.92□□□□□ -0.02
AMBRA1-211ENST00000533727 FAM9BQ8IZU0 186 aa14.92□□□□□ -0.02
AMBRA1-211ENST00000533727 PKD2Q13563 968 aa14.92□□□□□ -0.02
AMBRA1-211ENST00000533727 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
AMBRA1-211ENST00000533727 DCAF11Q8TEB1 546 aa14.91□□□□□ -0.02
AMBRA1-211ENST00000533727 PLEKHG5O94827 1062 aa14.91□□□□□ -0.02
AMBRA1-211ENST00000533727 HNRNPMP52272 730 aaKnown RBP eCLIP14.9□□□□□ -0.026e-8■■■■□ 24.7
AMBRA1-211ENST00000533727 HNRNPUQ00839 825 aaKnown RBP eCLIP14.9□□□□□ -0.02
AMBRA1-211ENST00000533727 NESP48681 1621 aa14.89□□□□□ -0.03
AMBRA1-211ENST00000533727 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
AMBRA1-211ENST00000533727 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
AMBRA1-211ENST00000533727 BICRAQ9NZM4 1560 aa14.87□□□□□ -0.03
AMBRA1-211ENST00000533727 SRPK2P78362 688 aaKnown RBP14.87□□□□□ -0.03
AMBRA1-211ENST00000533727 BCL11AQ9H165 835 aa14.87□□□□□ -0.03
AMBRA1-211ENST00000533727 MAPK8IP3Q9UPT6 1336 aa14.86□□□□□ -0.03
AMBRA1-211ENST00000533727 EIF3AQ14152 1382 aaKnown RBP14.86□□□□□ -0.03
AMBRA1-211ENST00000533727 HDGFL2Q7Z4V5 671 aaPredicted RBP14.86□□□□□ -0.03
AMBRA1-211ENST00000533727 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
AMBRA1-211ENST00000533727 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
AMBRA1-211ENST00000533727 KANK4Q5T7N3 995 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms