RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 LOC105371045A0A1W2PR82 267 aa8.36□□□□□ -1.07
CKAP5-212ENST00000533413 TRIM26Q12899 539 aaPredicted RBP8.35□□□□□ -1.07
CKAP5-212ENST00000533413 WRNQ14191 1432 aaPredicted RBP eCLIP8.35□□□□□ -1.07
CKAP5-212ENST00000533413 SYNJ1O43426 1573 aa8.34□□□□□ -1.07
CKAP5-212ENST00000533413 SOGA1O94964 1423 aa8.33□□□□□ -1.08
CKAP5-212ENST00000533413 ABCA10Q8WWZ4 1543 aa8.33□□□□□ -1.08
CKAP5-212ENST00000533413 PBRM1Q86U86 1689 aa8.33□□□□□ -1.08
CKAP5-212ENST00000533413 TMEM132AQ24JP5 1023 aa8.33□□□□□ -1.08
CKAP5-212ENST00000533413 ABCA5Q8WWZ7 1642 aa8.33□□□□□ -1.08
CKAP5-212ENST00000533413 ZEB1P37275 1124 aaPredicted RBP8.3□□□□□ -1.08
CKAP5-212ENST00000533413 ZNF608Q9ULD9 1512 aaPredicted RBP8.3□□□□□ -1.08
CKAP5-212ENST00000533413 MAGI1Q96QZ7 1491 aaPredicted RBP8.29□□□□□ -1.08
CKAP5-212ENST00000533413 RAD54L2Q9Y4B4 1467 aa8.29□□□□□ -1.08
CKAP5-212ENST00000533413 GRIN2BQ13224 1484 aa8.28□□□□□ -1.08
CKAP5-212ENST00000533413 FAM9AQ8IZU1 332 aaPredicted RBP8.28□□□□□ -1.08
CKAP5-212ENST00000533413 ERICH3Q5RHP9 1530 aa8.27□□□□□ -1.09
CKAP5-212ENST00000533413 CHD1O14646 1710 aa8.27□□□□□ -1.09
CKAP5-212ENST00000533413 GAPVD1Q14C86 1478 aa8.26□□□□□ -1.09
CKAP5-212ENST00000533413 AQRO60306 1485 aaKnown RBP eCLIP8.24□□□□□ -1.091e-6■■■□□ 18.8
CKAP5-212ENST00000533413 UBTFP17480 764 aaKnown RBP8.24□□□□□ -1.09
CKAP5-212ENST00000533413 CUL7Q14999 1698 aa8.24□□□□□ -1.09
CKAP5-212ENST00000533413 ADAMTS12P58397 1594 aa8.23□□□□□ -1.09
CKAP5-212ENST00000533413 SYNJ2O15056 1496 aa8.23□□□□□ -1.09
CKAP5-212ENST00000533413 SNAPC4Q5SXM2 1469 aa8.23□□□□□ -1.09
CKAP5-212ENST00000533413 TDRD9Q8NDG6 1382 aaKnown RBP8.21□□□□□ -1.09
CKAP5-212ENST00000533413 ZBTB22O15209 634 aa8.21□□□□□ -1.1
CKAP5-212ENST00000533413 PDIA4P13667 645 aaKnown RBP8.21□□□□□ -1.1
CKAP5-212ENST00000533413 DNAJC5Q9H3Z4 198 aa8.21□□□□□ -1.1
CKAP5-212ENST00000533413 KIF27Q86VH2 1401 aa8.2□□□□□ -1.1
CKAP5-212ENST00000533413 FHAD1B1AJZ9 1412 aa8.19□□□□□ -1.1
CKAP5-212ENST00000533413 KDM2AQ9Y2K7 1162 aa8.18□□□□□ -1.1
CKAP5-212ENST00000533413 OSCARQ8IYS5 282 aa8.18□□□□□ -1.1
CKAP5-212ENST00000533413 FBXO3Q9UK99 471 aa8.18□□□□□ -1.1
CKAP5-212ENST00000533413 CLASP1Q7Z460 1538 aa8.18□□□□□ -1.1
CKAP5-212ENST00000533413 TRIM41Q8WV44 630 aa8.17□□□□□ -1.1
CKAP5-212ENST00000533413 GRIN2AQ12879 1464 aa8.16□□□□□ -1.1
CKAP5-212ENST00000533413 CHMP4AQ9BY43 222 aa8.16□□□□□ -1.1
CKAP5-212ENST00000533413 FBLN2P98095 1184 aa8.16□□□□□ -1.1
CKAP5-212ENST00000533413 EEA1Q15075 1411 aa8.14□□□□□ -1.11
CKAP5-212ENST00000533413 NUP160Q12769 1436 aa8.13□□□□□ -1.11
CKAP5-212ENST00000533413 CHMP7Q8WUX9 453 aaPredicted RBP8.13□□□□□ -1.11
CKAP5-212ENST00000533413 SHROOM2Q13796 1616 aa8.13□□□□□ -1.11
CKAP5-212ENST00000533413 DHX37Q8IY37 1157 aaKnown RBP8.12□□□□□ -1.11
CKAP5-212ENST00000533413 CEP170Q5SW79 1584 aa8.12□□□□□ -1.11
CKAP5-212ENST00000533413 PPP6R1Q9UPN7 881 aa8.12□□□□□ -1.11
CKAP5-212ENST00000533413 RIMBP3CA6NJZ7 1639 aa8.12□□□□□ -1.11
CKAP5-212ENST00000533413 RIMBP3BA6NNM3 1639 aa8.12□□□□□ -1.11
CKAP5-212ENST00000533413 RIMBP3Q9UFD9 1639 aa8.12□□□□□ -1.11
CKAP5-212ENST00000533413 RUSC2Q8N2Y8 1516 aa8.11□□□□□ -1.11
CKAP5-212ENST00000533413 IGF1RP08069 1367 aa8.1□□□□□ -1.11
CKAP5-212ENST00000533413 ACIN1Q9UKV3 1341 aaKnown RBP8.1□□□□□ -1.11
CKAP5-212ENST00000533413 UBE2Q2Q8WVN8 375 aa8.09□□□□□ -1.11
CKAP5-212ENST00000533413 ARHGEF11O15085 1522 aa8.09□□□□□ -1.11
CKAP5-212ENST00000533413 CTTNBP2Q8WZ74 1663 aa8.09□□□□□ -1.11
CKAP5-212ENST00000533413 SAMD1Q6SPF0 538 aaPredicted RBP8.08□□□□□ -1.12
CKAP5-212ENST00000533413 POTEDQ86YR6 584 aa8.08□□□□□ -1.12
CKAP5-212ENST00000533413 RAPGEF2Q9Y4G8 1499 aa8.08□□□□□ -1.12
CKAP5-212ENST00000533413 CARMIL1Q5VZK9 1371 aa8.07□□□□□ -1.12
CKAP5-212ENST00000533413 KIAA0586Q9BVV6 1533 aa8.07□□□□□ -1.12
CKAP5-212ENST00000533413 VSIG10Q8N0Z9 540 aa8.06□□□□□ -1.12
CKAP5-212ENST00000533413 KIF21BO75037 1637 aa8.05□□□□□ -1.12
CKAP5-212ENST00000533413 FKBP8Q14318 412 aa8.05□□□□□ -1.12
CKAP5-212ENST00000533413 PRXQ9BXM0 1461 aa8.05□□□□□ -1.12
CKAP5-212ENST00000533413 IQGAP2Q13576 1575 aa8.05□□□□□ -1.12
CKAP5-212ENST00000533413 PDE4CQ08493 712 aa8.04□□□□□ -1.12
CKAP5-212ENST00000533413 ADRA2BP18089 450 aa8.04□□□□□ -1.12
CKAP5-212ENST00000533413 SENP3Q9H4L4 574 aaPredicted RBP8.02□□□□□ -1.13
CKAP5-212ENST00000533413 IGSF3O75054 1194 aa8.02□□□□□ -1.13
CKAP5-212ENST00000533413 CCER1Q8TC90 406 aaPredicted RBP8.01□□□□□ -1.13
CKAP5-212ENST00000533413 UGGT2Q9NYU1 1516 aa8.01□□□□□ -1.13
CKAP5-212ENST00000533413 ARAP1Q96P48 1450 aa8.01□□□□□ -1.13
CKAP5-212ENST00000533413 CENPBP07199 599 aaPredicted RBP7.99□□□□□ -1.13
CKAP5-212ENST00000533413 GOLGA3Q08378 1498 aa7.99□□□□□ -1.13
CKAP5-212ENST00000533413 CARMIL2Q6F5E8 1435 aa7.99□□□□□ -1.13
CKAP5-212ENST00000533413 NEUROD1Q13562 356 aa7.99□□□□□ -1.13
CKAP5-212ENST00000533413 CFAP44Q96MT7 982 aa7.99□□□□□ -1.13
CKAP5-212ENST00000533413 PRG4Q92954 1404 aaPredicted RBP7.98□□□□□ -1.13
CKAP5-212ENST00000533413 KIAA0556O60303 1618 aa7.97□□□□□ -1.13
CKAP5-212ENST00000533413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.97□□□□□ -1.13
CKAP5-212ENST00000533413 CDK11BP21127 795 aaKnown RBP7.96□□□□□ -1.14
CKAP5-212ENST00000533413 JPH4Q96JJ6 628 aa7.96□□□□□ -1.14
CKAP5-212ENST00000533413 CDK11AQ9UQ88 783 aaPredicted RBP7.96□□□□□ -1.14
CKAP5-212ENST00000533413 ERCC6L2Q5T890 1561 aa7.96□□□□□ -1.14
CKAP5-212ENST00000533413 SAMD9Q5K651 1589 aa7.95□□□□□ -1.14
CKAP5-212ENST00000533413 EFCAB5A4FU69 1503 aa7.95□□□□□ -1.14
CKAP5-212ENST00000533413 DISP1Q96F81 1524 aa7.94□□□□□ -1.14
CKAP5-212ENST00000533413 CNKSR2Q8WXI2 1034 aa7.94□□□□□ -1.14
CKAP5-212ENST00000533413 TNIKQ9UKE5 1360 aa7.94□□□□□ -1.14
CKAP5-212ENST00000533413 DIEXFQ68CQ4 756 aaKnown RBP7.93□□□□□ -1.14
CKAP5-212ENST00000533413 UHRF1BP1LA0JNW5 1464 aa7.93□□□□□ -1.14
CKAP5-212ENST00000533413 BRD2P25440 801 aaKnown RBP7.92□□□□□ -1.14
CKAP5-212ENST00000533413 BCL11BQ9C0K0 894 aaPredicted RBP7.91□□□□□ -1.14
CKAP5-212ENST00000533413 ADCY10Q96PN6 1610 aa7.91□□□□□ -1.14
CKAP5-212ENST00000533413 MAPKBP1O60336 1514 aa7.9□□□□□ -1.14
CKAP5-212ENST00000533413 PKNOX2Q96KN3 472 aa7.9□□□□□ -1.14
CKAP5-212ENST00000533413 ABCC2Q92887 1545 aa7.89□□□□□ -1.15
CKAP5-212ENST00000533413 PTPRGP23470 1445 aa7.89□□□□□ -1.15
CKAP5-212ENST00000533413 CYB5RLQ6IPT4 315 aa7.89□□□□□ -1.15
CKAP5-212ENST00000533413 TAF7LQ5H9L4 462 aa7.88□□□□□ -1.15
CKAP5-212ENST00000533413 ANP32EQ9BTT0 268 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms