RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SHROOM2Q13796 1616 aa23■■□□□ 1.27
COPB1-209ENST00000533096 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
COPB1-209ENST00000533096 IGF1RP08069 1367 aa22.91■■□□□ 1.26
COPB1-209ENST00000533096 ABCC10Q5T3U5 1492 aa22.91■■□□□ 1.26
COPB1-209ENST00000533096 KDM4FA0A1W2PPD8 638 aa22.84■■□□□ 1.25
COPB1-209ENST00000533096 PTPRGP23470 1445 aa22.82■■□□□ 1.24
COPB1-209ENST00000533096 KIAA0586Q9BVV6 1533 aa22.82■■□□□ 1.24
COPB1-209ENST00000533096 KIF13AQ9H1H9 1805 aa22.82■■□□□ 1.24
COPB1-209ENST00000533096 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
COPB1-209ENST00000533096 RUSC2Q8N2Y8 1516 aa22.8■■□□□ 1.24
COPB1-209ENST00000533096 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
COPB1-209ENST00000533096 MAPKBP1O60336 1514 aa22.76■■□□□ 1.23
COPB1-209ENST00000533096 ADCY10Q96PN6 1610 aa22.75■■□□□ 1.23
COPB1-209ENST00000533096 DIP2BQ9P265 1576 aa22.72■■□□□ 1.23
COPB1-209ENST00000533096 CARMIL2Q6F5E8 1435 aa22.69■■□□□ 1.22
COPB1-209ENST00000533096 TNIKQ9UKE5 1360 aa22.69■■□□□ 1.22
COPB1-209ENST00000533096 KDM6BO15054 1643 aa22.66■■□□□ 1.22
COPB1-209ENST00000533096 ASXL2Q76L83 1435 aa22.62■■□□□ 1.21
COPB1-209ENST00000533096 TSPOAP1O95153 1857 aa22.61■■□□□ 1.21
COPB1-209ENST00000533096 ABCC2Q92887 1545 aa22.58■■□□□ 1.21
COPB1-209ENST00000533096 CUL7Q14999 1698 aa22.57■■□□□ 1.2
COPB1-209ENST00000533096 PLB1Q6P1J6 1458 aa22.56■■□□□ 1.2
COPB1-209ENST00000533096 UACAQ9BZF9 1416 aa22.56■■□□□ 1.2
COPB1-209ENST00000533096 ILDR1Q86SU0 546 aaPredicted RBP22.54■■□□□ 1.2
COPB1-209ENST00000533096 KCNH8Q96L42 1107 aa22.5■■□□□ 1.19
COPB1-209ENST00000533096 IQGAP2Q13576 1575 aa22.46■■□□□ 1.19
COPB1-209ENST00000533096 UHRF1BP1LA0JNW5 1464 aa22.46■■□□□ 1.19
COPB1-209ENST00000533096 COL17A1Q9UMD9 1497 aaPredicted RBP22.46■■□□□ 1.19
COPB1-209ENST00000533096 DISP1Q96F81 1524 aa22.45■■□□□ 1.18
COPB1-209ENST00000533096 RAPGEF2Q9Y4G8 1499 aa22.42■■□□□ 1.18
COPB1-209ENST00000533096 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
COPB1-209ENST00000533096 ADGRL1O94910 1474 aa22.41■■□□□ 1.18
COPB1-209ENST00000533096 GLI2P10070 1586 aa22.41■■□□□ 1.18
COPB1-209ENST00000533096 ARID3CA6NKF2 412 aa22.38■■□□□ 1.17
COPB1-209ENST00000533096 KDM5BQ9UGL1 1544 aa22.37■■□□□ 1.17
COPB1-209ENST00000533096 P3H3Q8IVL6 736 aa22.34■■□□□ 1.17
COPB1-209ENST00000533096 TEX14Q8IWB6 1497 aa22.34■■□□□ 1.17
COPB1-209ENST00000533096 UGGT2Q9NYU1 1516 aa22.31■■□□□ 1.16
COPB1-209ENST00000533096 PPRC1Q5VV67 1664 aaKnown RBP22.31■■□□□ 1.16
COPB1-209ENST00000533096 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
COPB1-209ENST00000533096 CD109Q6YHK3 1445 aa22.3■■□□□ 1.16
COPB1-209ENST00000533096 WDR7Q9Y4E6 1490 aa22.27■■□□□ 1.16
COPB1-209ENST00000533096 ZCCHC11Q5TAX3 1644 aaKnown RBP22.25■■□□□ 1.15
COPB1-209ENST00000533096 KIAA0556O60303 1618 aa22.24■■□□□ 1.15
COPB1-209ENST00000533096 MAP3K4Q9Y6R4 1608 aa22.23■■□□□ 1.15
COPB1-209ENST00000533096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.21■■□□□ 1.15
COPB1-209ENST00000533096 HNRNPUL2Q1KMD3 747 aaKnown RBP22.21■■□□□ 1.15
COPB1-209ENST00000533096 RANGAP1P46060 587 aaPredicted RBP22.19■■□□□ 1.14
COPB1-209ENST00000533096 GOLGA3Q08378 1498 aa22.19■■□□□ 1.14
COPB1-209ENST00000533096 HECW2Q9P2P5 1572 aa22.14■■□□□ 1.13
COPB1-209ENST00000533096 MAGI3Q5TCQ9 1506 aa22.13■■□□□ 1.13
COPB1-209ENST00000533096 RAPGEF3O95398 923 aa22.12■■□□□ 1.13
COPB1-209ENST00000533096 ARID4BQ4LE39 1312 aaPredicted RBP22.09■■□□□ 1.13
COPB1-209ENST00000533096 ABCA8O94911 1581 aa22.09■■□□□ 1.13
COPB1-209ENST00000533096 CSRNP3Q8WYN3 585 aa22.06■■□□□ 1.12
COPB1-209ENST00000533096 ATP10BO94823 1461 aa22.06■■□□□ 1.12
COPB1-209ENST00000533096 PRXQ9BXM0 1461 aa22.06■■□□□ 1.12
COPB1-209ENST00000533096 PLPPR3Q6T4P5 718 aa22.02■■□□□ 1.12
COPB1-209ENST00000533096 CFAP43Q8NDM7 1665 aa21.98■■□□□ 1.11
COPB1-209ENST00000533096 CTTNBP2Q8WZ74 1663 aa21.98■■□□□ 1.11
COPB1-209ENST00000533096 ARAP3Q8WWN8 1544 aa21.97■■□□□ 1.11
COPB1-209ENST00000533096 PLEKHD1A6NEE1 506 aa21.96■■□□□ 1.11
COPB1-209ENST00000533096 FBXO41Q8TF61 875 aa21.96■■□□□ 1.11
COPB1-209ENST00000533096 PHLDB1Q86UU1 1377 aa21.96■■□□□ 1.11
COPB1-209ENST00000533096 KIF21BO75037 1637 aa21.93■■□□□ 1.1
COPB1-209ENST00000533096 PTPRMP28827 1452 aa21.9■■□□□ 1.1
COPB1-209ENST00000533096 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
COPB1-209ENST00000533096 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
COPB1-209ENST00000533096 MLECQ14165 292 aa21.86■■□□□ 1.09
COPB1-209ENST00000533096 HSPA2P54652 639 aa21.84■■□□□ 1.09
COPB1-209ENST00000533096 NEO1Q92859 1461 aa21.83■■□□□ 1.09
COPB1-209ENST00000533096 FHOD3Q2V2M9 1422 aa21.83■■□□□ 1.09
COPB1-209ENST00000533096 ABCA9Q8IUA7 1624 aa21.8■■□□□ 1.08
COPB1-209ENST00000533096 NUP153P49790 1475 aaKnown RBP21.79■■□□□ 1.08
COPB1-209ENST00000533096 DENND4BO75064 1496 aaPredicted RBP21.78■■□□□ 1.08
COPB1-209ENST00000533096 RAPGEF6Q8TEU7 1601 aa21.78■■□□□ 1.08
COPB1-209ENST00000533096 AKNAQ7Z591 1439 aa21.78■■□□□ 1.08
COPB1-209ENST00000533096 ADAMTSL3P82987 1691 aa21.74■■□□□ 1.07
COPB1-209ENST00000533096 SAMD9Q5K651 1589 aa21.73■■□□□ 1.07
COPB1-209ENST00000533096 UBTFP17480 764 aaKnown RBP21.72■■□□□ 1.07
COPB1-209ENST00000533096 FANCAO15360 1455 aa21.71■■□□□ 1.07
COPB1-209ENST00000533096 MYT1LQ9UL68 1186 aa21.7■■□□□ 1.06
COPB1-209ENST00000533096 POGZQ7Z3K3 1410 aa21.68■■□□□ 1.06
COPB1-209ENST00000533096 MADDQ8WXG6 1647 aa21.68■■□□□ 1.06
COPB1-209ENST00000533096 FRMPD1Q5SYB0 1578 aa21.67■■□□□ 1.06
COPB1-209ENST00000533096 LMTK3Q96Q04 1460 aa21.67■■□□□ 1.06
COPB1-209ENST00000533096 YEATS2Q9ULM3 1422 aa21.67■■□□□ 1.06
COPB1-209ENST00000533096 CEBPAP49715 358 aaPredicted RBP21.66■■□□□ 1.06
COPB1-209ENST00000533096 BCORL1Q5H9F3 1711 aa21.66■■□□□ 1.06
COPB1-209ENST00000533096 PCF11O94913 1555 aaKnown RBP21.65■■□□□ 1.06
COPB1-209ENST00000533096 SCAPERQ9BY12 1400 aa21.65■■□□□ 1.06
COPB1-209ENST00000533096 EFCAB2Q5VUJ9 269 aa21.65■■□□□ 1.06
COPB1-209ENST00000533096 EEA1Q15075 1411 aa21.64■■□□□ 1.06
COPB1-209ENST00000533096 CERKQ8TCT0 537 aa21.63■■□□□ 1.05
COPB1-209ENST00000533096 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.63■■□□□ 1.05
COPB1-209ENST00000533096 CDK11AQ9UQ88 783 aaPredicted RBP21.6■■□□□ 1.05
COPB1-209ENST00000533096 AFAP1Q8N556 730 aa21.58■■□□□ 1.05
COPB1-209ENST00000533096 RIMS1Q86UR5 1692 aaKnown RBP21.58■■□□□ 1.05
COPB1-209ENST00000533096 CDK13Q14004 1512 aaKnown RBP21.58■■□□□ 1.04
COPB1-209ENST00000533096 PLCH2O75038 1416 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms