RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 TPRNQ4KMQ1 711 aa8.65□□□□□ -1.02
AC055878.1-201ENST00000531858 DCAF8L2P0C7V8 631 aa8.62□□□□□ -1.03
AC055878.1-201ENST00000531858 VASPP50552 380 aaPredicted RBP8.62□□□□□ -1.03
AC055878.1-201ENST00000531858 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.62□□□□□ -1.03
AC055878.1-201ENST00000531858 PCDH10Q9P2E7 1040 aa8.62□□□□□ -1.03
AC055878.1-201ENST00000531858 PAK3O75914 559 aaPredicted RBP8.61□□□□□ -1.03
AC055878.1-201ENST00000531858 ERICH6Q7L0X2 663 aa8.61□□□□□ -1.03
AC055878.1-201ENST00000531858 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
AC055878.1-201ENST00000531858 PROM2Q8N271 834 aa8.59□□□□□ -1.03
AC055878.1-201ENST00000531858 BBXQ8WY36 941 aaPredicted RBP8.59□□□□□ -1.03
AC055878.1-201ENST00000531858 CREBZFQ9NS37 354 aa8.58□□□□□ -1.04
AC055878.1-201ENST00000531858 STAG3Q9UJ98 1225 aa8.57□□□□□ -1.04
AC055878.1-201ENST00000531858 SPDYE4A6NLX3 237 aa8.55□□□□□ -1.04
AC055878.1-201ENST00000531858 DAXXQ9UER7 740 aaPredicted RBP8.55□□□□□ -1.04
AC055878.1-201ENST00000531858 PKD2Q13563 968 aa8.54□□□□□ -1.04
AC055878.1-201ENST00000531858 ARXQ96QS3 562 aa8.54□□□□□ -1.04
AC055878.1-201ENST00000531858 PHF12Q96QT6 1004 aa8.53□□□□□ -1.04
AC055878.1-201ENST00000531858 KDM2AQ9Y2K7 1162 aa8.53□□□□□ -1.04
AC055878.1-201ENST00000531858 IFNLR1Q8IU57 520 aaPredicted RBP8.51□□□□□ -1.05
AC055878.1-201ENST00000531858 MAMSTRQ6ZN01 415 aa8.5□□□□□ -1.05
AC055878.1-201ENST00000531858 METRNQ9UJH8 293 aa8.5□□□□□ -1.05
AC055878.1-201ENST00000531858 PELP1Q8IZL8 1130 aaKnown RBP8.49□□□□□ -1.05
AC055878.1-201ENST00000531858 NPM1P06748 294 aaKnown RBP eCLIP8.48□□□□□ -1.05
AC055878.1-201ENST00000531858 C7P10643 843 aa8.48□□□□□ -1.05
AC055878.1-201ENST00000531858 SLC39A7Q92504 469 aa8.48□□□□□ -1.05
AC055878.1-201ENST00000531858 ASTLQ6HA08 431 aaPredicted RBP8.45□□□□□ -1.06
AC055878.1-201ENST00000531858 PAXIP1Q6ZW49 1069 aaPredicted RBP8.44□□□□□ -1.06
AC055878.1-201ENST00000531858 ATMINO43313 823 aaPredicted RBP8.42□□□□□ -1.06
AC055878.1-201ENST00000531858 SCUBE2Q9NQ36 999 aa8.42□□□□□ -1.06
AC055878.1-201ENST00000531858 POTEJP0CG39 1038 aa8.41□□□□□ -1.06
AC055878.1-201ENST00000531858 SPRYD3Q8NCJ5 442 aa8.41□□□□□ -1.06
AC055878.1-201ENST00000531858 FAM163AQ96GL9 167 aaPredicted RBP8.41□□□□□ -1.06
AC055878.1-201ENST00000531858 MS4A3Q96HJ5 214 aa8.41□□□□□ -1.06
AC055878.1-201ENST00000531858 TIMELESSQ9UNS1 1208 aa8.41□□□□□ -1.06
AC055878.1-201ENST00000531858 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
AC055878.1-201ENST00000531858 GTF3C3Q9Y5Q9 886 aa8.39□□□□□ -1.07
AC055878.1-201ENST00000531858 TULP1O00294 542 aaPredicted RBP8.38□□□□□ -1.07
AC055878.1-201ENST00000531858 NBR1Q14596 966 aa8.38□□□□□ -1.07
AC055878.1-201ENST00000531858 LCE2DQ5TA82 110 aaPredicted RBP8.38□□□□□ -1.07
AC055878.1-201ENST00000531858 ECM2O94769 699 aaPredicted RBP8.36□□□□□ -1.07
AC055878.1-201ENST00000531858 MNX1P50219 401 aaPredicted RBP8.36□□□□□ -1.07
AC055878.1-201ENST00000531858 SPOCK2Q92563 424 aa8.36□□□□□ -1.07
AC055878.1-201ENST00000531858 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
AC055878.1-201ENST00000531858 TSHZ2Q9NRE2 1034 aa8.31□□□□□ -1.08
AC055878.1-201ENST00000531858 ATN1P54259 1190 aaPredicted RBP8.3□□□□□ -1.08
AC055878.1-201ENST00000531858 TMEM132AQ24JP5 1023 aa8.28□□□□□ -1.08
AC055878.1-201ENST00000531858 HOMEZQ8IX15 550 aa8.28□□□□□ -1.08
AC055878.1-201ENST00000531858 TSPYL2Q9H2G4 693 aaPredicted RBP8.27□□□□□ -1.09
AC055878.1-201ENST00000531858 CDAN1Q8IWY9 1227 aa8.26□□□□□ -1.09
AC055878.1-201ENST00000531858 KLHL34Q8N239 644 aa8.26□□□□□ -1.09
AC055878.1-201ENST00000531858 BMP2KQ9NSY1 1161 aaPredicted RBP8.24□□□□□ -1.09
AC055878.1-201ENST00000531858 CCDC61Q9Y6R9 512 aa8.23□□□□□ -1.09
AC055878.1-201ENST00000531858 POTEFA5A3E0 1075 aa8.22□□□□□ -1.09
AC055878.1-201ENST00000531858 KIF12Q96FN5 646 aa8.22□□□□□ -1.09
AC055878.1-201ENST00000531858 RGL2O15211 777 aa8.21□□□□□ -1.1
AC055878.1-201ENST00000531858 SEC24BO95487 1268 aa8.21□□□□□ -1.1
AC055878.1-201ENST00000531858 TIE1P35590 1138 aa8.21□□□□□ -1.1
AC055878.1-201ENST00000531858 TRIM41Q8WV44 630 aa8.17□□□□□ -1.1
AC055878.1-201ENST00000531858 CHGAP10645 457 aaKnown RBP8.16□□□□□ -1.1
AC055878.1-201ENST00000531858 TRPC6Q9Y210 931 aa8.16□□□□□ -1.1
AC055878.1-201ENST00000531858 COLQQ9Y215 455 aaPredicted RBP8.16□□□□□ -1.1
AC055878.1-201ENST00000531858 MAP3K13O43283 966 aa8.14□□□□□ -1.11
AC055878.1-201ENST00000531858 TTLL13PA6NNM8 815 aa8.13□□□□□ -1.11
AC055878.1-201ENST00000531858 IER5LQ5T953 404 aa8.13□□□□□ -1.11
AC055878.1-201ENST00000531858 C14orf37Q86TY3 774 aa8.13□□□□□ -1.11
AC055878.1-201ENST00000531858 ST18O60284 1047 aa8.12□□□□□ -1.11
AC055878.1-201ENST00000531858 HS6ST3Q8IZP7 471 aa8.12□□□□□ -1.11
AC055878.1-201ENST00000531858 SLAIN1Q8ND83 568 aa8.12□□□□□ -1.11
AC055878.1-201ENST00000531858 PLEKHG5O94827 1062 aa8.11□□□□□ -1.11
AC055878.1-201ENST00000531858 MMRN1Q13201 1228 aa8.1□□□□□ -1.11
AC055878.1-201ENST00000531858 TRIM35Q9UPQ4 493 aa8.1□□□□□ -1.11
AC055878.1-201ENST00000531858 PLCD3Q8N3E9 789 aa8.09□□□□□ -1.11
AC055878.1-201ENST00000531858 ZBTB47Q9UFB7 747 aaPredicted RBP8.08□□□□□ -1.12
AC055878.1-201ENST00000531858 SPNS2Q8IVW8 549 aa8.06□□□□□ -1.12
AC055878.1-201ENST00000531858 TMEM121BQ9BXQ6 578 aaPredicted RBP8.06□□□□□ -1.12
AC055878.1-201ENST00000531858 RASEFQ8IZ41 740 aa8.05□□□□□ -1.12
AC055878.1-201ENST00000531858 SGIP1Q9BQI5 828 aa8.05□□□□□ -1.12
AC055878.1-201ENST00000531858 PLCG2P16885 1265 aa8.04□□□□□ -1.12
AC055878.1-201ENST00000531858 PCDHB13Q9Y5F0 798 aa8.03□□□□□ -1.12
AC055878.1-201ENST00000531858 SNPHO15079 494 aa8.01□□□□□ -1.13
AC055878.1-201ENST00000531858 MIER1Q8N108 512 aa8.01□□□□□ -1.13
AC055878.1-201ENST00000531858 CIZ1Q9ULV3 898 aaPredicted RBP8.01□□□□□ -1.13
AC055878.1-201ENST00000531858 P3H3Q8IVL6 736 aa8□□□□□ -1.13
AC055878.1-201ENST00000531858 RYDENQ9NUL5 291 aaKnown RBP7.98□□□□□ -1.13
AC055878.1-201ENST00000531858 TMEM106CQ9BVX2 250 aa7.97□□□□□ -1.13
AC055878.1-201ENST00000531858 GTPBP6O43824 516 aaPredicted RBP7.95□□□□□ -1.14
AC055878.1-201ENST00000531858 MARVELD3Q96A59 401 aa7.95□□□□□ -1.14
AC055878.1-201ENST00000531858 RANGAP1P46060 587 aaPredicted RBP7.94□□□□□ -1.14
AC055878.1-201ENST00000531858 IRX5P78411 483 aaPredicted RBP7.94□□□□□ -1.14
AC055878.1-201ENST00000531858 GSE1Q14687 1217 aa7.94□□□□□ -1.14
AC055878.1-201ENST00000531858 IFNL1Q8IU54 200 aa7.94□□□□□ -1.14
AC055878.1-201ENST00000531858 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.94□□□□□ -1.14
AC055878.1-201ENST00000531858 OCEL1Q9H607 264 aa7.92□□□□□ -1.14
AC055878.1-201ENST00000531858 NKX1-1Q15270 411 aaPredicted RBP7.91□□□□□ -1.14
AC055878.1-201ENST00000531858 EMP3P54852 163 aa7.89□□□□□ -1.15
AC055878.1-201ENST00000531858 FAM212AQ96EL1 285 aa7.89□□□□□ -1.15
AC055878.1-201ENST00000531858 RIOK3O14730 519 aaKnown RBP7.88□□□□□ -1.15
AC055878.1-201ENST00000531858 NUBP1P53384 320 aa7.87□□□□□ -1.15
AC055878.1-201ENST00000531858 LMOD2Q6P5Q4 547 aa7.87□□□□□ -1.15
AC055878.1-201ENST00000531858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms