RNA–Protein interactions for RNA: ENST00000531755.5

NFRKB-209, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 5

Gene NFRKB, Length 3,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-209ENST00000531755 DHX57Q6P158 1386 aaKnown RBP13.62□□□□□ -0.23
NFRKB-209ENST00000531755 CENPBP07199 599 aaPredicted RBP13.62□□□□□ -0.23
NFRKB-209ENST00000531755 DAXXQ9UER7 740 aaPredicted RBP13.62□□□□□ -0.23
NFRKB-209ENST00000531755 CCNB3Q8WWL7 1395 aa13.61□□□□□ -0.23
NFRKB-209ENST00000531755 FHOD3Q2V2M9 1422 aa13.58□□□□□ -0.24
NFRKB-209ENST00000531755 SIN3AQ96ST3 1273 aa13.58□□□□□ -0.24
NFRKB-209ENST00000531755 HIRIP3Q9BW71 556 aaPredicted RBP13.55□□□□□ -0.24
NFRKB-209ENST00000531755 RTN4Q9NQC3 1192 aaKnown RBP13.55□□□□□ -0.24
NFRKB-209ENST00000531755 PHLDB1Q86UU1 1377 aa13.55□□□□□ -0.24
NFRKB-209ENST00000531755 POLA1P09884 1462 aaPredicted RBP13.54□□□□□ -0.24
NFRKB-209ENST00000531755 RAB3GAP2Q9H2M9 1393 aa13.53□□□□□ -0.24
NFRKB-209ENST00000531755 TOPBP1Q92547 1522 aa13.51□□□□□ -0.25
NFRKB-209ENST00000531755 RRBP1Q9P2E9 1410 aaKnown RBP13.51□□□□□ -0.25
NFRKB-209ENST00000531755 LRRC9Q6ZRR7 1453 aa13.45□□□□□ -0.26
NFRKB-209ENST00000531755 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
NFRKB-209ENST00000531755 URB2Q14146 1524 aaKnown RBP13.45□□□□□ -0.26
NFRKB-209ENST00000531755 CHIC2Q9UKJ5 165 aa13.45□□□□□ -0.26
NFRKB-209ENST00000531755 KCNH8Q96L42 1107 aa13.44□□□□□ -0.26
NFRKB-209ENST00000531755 TIAM1Q13009 1591 aa13.42□□□□□ -0.26
NFRKB-209ENST00000531755 ABCA10Q8WWZ4 1543 aa13.42□□□□□ -0.26
NFRKB-209ENST00000531755 FHAD1B1AJZ9 1412 aa13.41□□□□□ -0.26
NFRKB-209ENST00000531755 DNMBPQ6XZF7 1577 aa13.41□□□□□ -0.26
NFRKB-209ENST00000531755 CLSPNQ9HAW4 1339 aa13.41□□□□□ -0.26
NFRKB-209ENST00000531755 SETD5Q9C0A6 1442 aa13.4□□□□□ -0.26
NFRKB-209ENST00000531755 MTUS2Q5JR59 1369 aa13.4□□□□□ -0.26
NFRKB-209ENST00000531755 DDX10Q13206 875 aaKnown RBP13.4□□□□□ -0.26
NFRKB-209ENST00000531755 PCF11O94913 1555 aaKnown RBP13.39□□□□□ -0.27
NFRKB-209ENST00000531755 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
NFRKB-209ENST00000531755 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.271e-7■■■■□ 21.6
NFRKB-209ENST00000531755 KIF21AQ7Z4S6 1674 aa13.38□□□□□ -0.27
NFRKB-209ENST00000531755 GAPVD1Q14C86 1478 aa13.37□□□□□ -0.27
NFRKB-209ENST00000531755 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
NFRKB-209ENST00000531755 FBLN2P98095 1184 aa13.36□□□□□ -0.27
NFRKB-209ENST00000531755 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
NFRKB-209ENST00000531755 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
NFRKB-209ENST00000531755 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
NFRKB-209ENST00000531755 MYT1Q01538 1121 aa13.31□□□□□ -0.28
NFRKB-209ENST00000531755 MAPKBP1O60336 1514 aa13.31□□□□□ -0.28
NFRKB-209ENST00000531755 CASKIN1Q8WXD9 1431 aa13.31□□□□□ -0.28
NFRKB-209ENST00000531755 FOXD1Q16676 465 aa13.3□□□□□ -0.28
NFRKB-209ENST00000531755 PTPRKQ15262 1439 aa13.29□□□□□ -0.28
NFRKB-209ENST00000531755 FMN1Q68DA7 1419 aa13.29□□□□□ -0.28
NFRKB-209ENST00000531755 FGD6Q6ZV73 1430 aa13.26□□□□□ -0.29
NFRKB-209ENST00000531755 FYCO1Q9BQS8 1478 aa13.26□□□□□ -0.29
NFRKB-209ENST00000531755 PPP1R15AO75807 674 aaPredicted RBP13.26□□□□□ -0.29
NFRKB-209ENST00000531755 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
NFRKB-209ENST00000531755 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
NFRKB-209ENST00000531755 ZNF608Q9ULD9 1512 aaPredicted RBP13.23□□□□□ -0.29
NFRKB-209ENST00000531755 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
NFRKB-209ENST00000531755 NCOA2Q15596 1464 aa13.22□□□□□ -0.29
NFRKB-209ENST00000531755 ABCA5Q8WWZ7 1642 aa13.22□□□□□ -0.29
NFRKB-209ENST00000531755 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.29
NFRKB-209ENST00000531755 TONSLQ96HA7 1378 aa13.21□□□□□ -0.29
NFRKB-209ENST00000531755 ZNF777Q9ULD5 760 aaPredicted RBP13.21□□□□□ -0.29
NFRKB-209ENST00000531755 CUL7Q14999 1698 aa13.2□□□□□ -0.3
NFRKB-209ENST00000531755 EFCAB5A4FU69 1503 aa13.2□□□□□ -0.3
NFRKB-209ENST00000531755 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
NFRKB-209ENST00000531755 BCANQ96GW7 911 aa13.19□□□□□ -0.3
NFRKB-209ENST00000531755 CHMP7Q8WUX9 453 aaPredicted RBP13.19□□□□□ -0.3
NFRKB-209ENST00000531755 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
NFRKB-209ENST00000531755 CFAP43Q8NDM7 1665 aa13.17□□□□□ -0.3
NFRKB-209ENST00000531755 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
NFRKB-209ENST00000531755 CDK13Q14004 1512 aaKnown RBP13.17□□□□□ -0.3
NFRKB-209ENST00000531755 MYOM3Q5VTT5 1437 aa13.17□□□□□ -0.3
NFRKB-209ENST00000531755 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
NFRKB-209ENST00000531755 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
NFRKB-209ENST00000531755 GRIN2BQ13224 1484 aa13.15□□□□□ -0.3
NFRKB-209ENST00000531755 NAIPQ13075 1403 aa13.14□□□□□ -0.31
NFRKB-209ENST00000531755 WDR62O43379 1518 aa13.12□□□□□ -0.31
NFRKB-209ENST00000531755 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
NFRKB-209ENST00000531755 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
NFRKB-209ENST00000531755 LRRIQ1Q96JM4 1722 aa13.12□□□□□ -0.31
NFRKB-209ENST00000531755 MPHOSPH9Q99550 1183 aa13.11□□□□□ -0.31
NFRKB-209ENST00000531755 ANP32CO43423 234 aa13.11□□□□□ -0.31
NFRKB-209ENST00000531755 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
NFRKB-209ENST00000531755 AEBP2Q6ZN18 517 aaPredicted RBP13.11□□□□□ -0.31
NFRKB-209ENST00000531755 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
NFRKB-209ENST00000531755 ZNF326Q5BKZ1 582 aaKnown RBP13.1□□□□□ -0.31
NFRKB-209ENST00000531755 PBRM1Q86U86 1689 aa13.1□□□□□ -0.31
NFRKB-209ENST00000531755 SAMD9Q5K651 1589 aa13.09□□□□□ -0.31
NFRKB-209ENST00000531755 EPRSP07814 1512 aaKnown RBP13.09□□□□□ -0.31
NFRKB-209ENST00000531755 UACAQ9BZF9 1416 aa13.09□□□□□ -0.31
NFRKB-209ENST00000531755 L3MBTL2Q969R5 705 aa13.09□□□□□ -0.31
NFRKB-209ENST00000531755 THOC2Q8NI27 1593 aaKnown RBP13.08□□□□□ -0.31
NFRKB-209ENST00000531755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.08□□□□□ -0.31
NFRKB-209ENST00000531755 POLR3GLQ9BT43 218 aa13.08□□□□□ -0.32
NFRKB-209ENST00000531755 SLC4A1APQ9BWU0 796 aaKnown RBP13.07□□□□□ -0.32
NFRKB-209ENST00000531755 TIMELESSQ9UNS1 1208 aa13.07□□□□□ -0.32
NFRKB-209ENST00000531755 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
NFRKB-209ENST00000531755 PRKCSHP14314 528 aaPredicted RBP13.07□□□□□ -0.32
NFRKB-209ENST00000531755 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
NFRKB-209ENST00000531755 JPH4Q96JJ6 628 aa13.06□□□□□ -0.32
NFRKB-209ENST00000531755 IQGAP2Q13576 1575 aa13.06□□□□□ -0.32
NFRKB-209ENST00000531755 PTPN23Q9H3S7 1636 aa13.05□□□□□ -0.32
NFRKB-209ENST00000531755 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
NFRKB-209ENST00000531755 KCNA4P22459 653 aa13.04□□□□□ -0.32
NFRKB-209ENST00000531755 FKBP8Q14318 412 aa13.04□□□□□ -0.32
NFRKB-209ENST00000531755 PRG4Q92954 1404 aaPredicted RBP13.04□□□□□ -0.32
NFRKB-209ENST00000531755 CDK11AQ9UQ88 783 aaPredicted RBP13.04□□□□□ -0.32
NFRKB-209ENST00000531755 SUPT6HQ7KZ85 1726 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms