RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 NUP160Q12769 1436 aa26.67■■□□□ 1.86
BRK1-201ENST00000530758 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
BRK1-201ENST00000530758 CYB5RLQ6IPT4 315 aa26.61■■□□□ 1.85
BRK1-201ENST00000530758 FAM9AQ8IZU1 332 aaPredicted RBP26.6■■□□□ 1.85
BRK1-201ENST00000530758 KIF21BO75037 1637 aa26.54■■□□□ 1.84
BRK1-201ENST00000530758 KIAA0586Q9BVV6 1533 aa26.51■■□□□ 1.83
BRK1-201ENST00000530758 ERCC6L2Q5T890 1561 aa26.5■■□□□ 1.83
BRK1-201ENST00000530758 SHROOM2Q13796 1616 aa26.47■■□□□ 1.83
BRK1-201ENST00000530758 CTTNBP2Q8WZ74 1663 aa26.41■■□□□ 1.82
BRK1-201ENST00000530758 JPH4Q96JJ6 628 aa26.4■■□□□ 1.82
BRK1-201ENST00000530758 IQGAP2Q13576 1575 aa26.37■■□□□ 1.81
BRK1-201ENST00000530758 GOLGA3Q08378 1498 aa26.36■■□□□ 1.81
BRK1-201ENST00000530758 UGGT2Q9NYU1 1516 aa26.29■■□□□ 1.8
BRK1-201ENST00000530758 PRG4Q92954 1404 aaPredicted RBP26.28■■□□□ 1.8
BRK1-201ENST00000530758 UBTFP17480 764 aaKnown RBP26.22■■□□□ 1.79
BRK1-201ENST00000530758 DISP1Q96F81 1524 aa26.19■■□□□ 1.78
BRK1-201ENST00000530758 CARMIL2Q6F5E8 1435 aa26.18■■□□□ 1.78
BRK1-201ENST00000530758 EHMT2Q96KQ7 1210 aa26.14■■□□□ 1.78
BRK1-201ENST00000530758 TNIKQ9UKE5 1360 aa26.14■■□□□ 1.78
BRK1-201ENST00000530758 KIAA0556O60303 1618 aa26.13■■□□□ 1.77
BRK1-201ENST00000530758 TRHP20396 242 aaPredicted RBP26.12■■□□□ 1.77
BRK1-201ENST00000530758 SAMD9Q5K651 1589 aa26.11■■□□□ 1.77
BRK1-201ENST00000530758 LOC105371045A0A1W2PR82 267 aa26.05■■□□□ 1.76
BRK1-201ENST00000530758 EFCAB5A4FU69 1503 aa26.04■■□□□ 1.76
BRK1-201ENST00000530758 PTPRGP23470 1445 aa26.02■■□□□ 1.76
BRK1-201ENST00000530758 ADCY10Q96PN6 1610 aa25.99■■□□□ 1.75
BRK1-201ENST00000530758 ARHGAP35Q9NRY4 1499 aa25.96■■□□□ 1.75
BRK1-201ENST00000530758 RANGAP1P46060 587 aaPredicted RBP25.93■■□□□ 1.74
BRK1-201ENST00000530758 P3H3Q8IVL6 736 aa25.92■■□□□ 1.74
BRK1-201ENST00000530758 CLIP1P30622 1438 aa25.88■■□□□ 1.73
BRK1-201ENST00000530758 KIF13AQ9H1H9 1805 aa25.88■■□□□ 1.73
BRK1-201ENST00000530758 UHRF1BP1LA0JNW5 1464 aa25.88■■□□□ 1.73
BRK1-201ENST00000530758 FHOD3Q2V2M9 1422 aa25.88■■□□□ 1.73
BRK1-201ENST00000530758 UACAQ9BZF9 1416 aa25.88■■□□□ 1.73
BRK1-201ENST00000530758 CEP162Q5TB80 1403 aa25.85■■□□□ 1.73
BRK1-201ENST00000530758 ABCA8O94911 1581 aa25.85■■□□□ 1.73
BRK1-201ENST00000530758 MAPKBP1O60336 1514 aa25.83■■□□□ 1.73
BRK1-201ENST00000530758 ABCC2Q92887 1545 aa25.82■■□□□ 1.72
BRK1-201ENST00000530758 TTBK1Q5TCY1 1321 aaPredicted RBP25.82■■□□□ 1.72
BRK1-201ENST00000530758 PLB1Q6P1J6 1458 aa25.8■■□□□ 1.72
BRK1-201ENST00000530758 FMN1Q68DA7 1419 aa25.79■■□□□ 1.72
BRK1-201ENST00000530758 ABCC10Q5T3U5 1492 aa25.76■■□□□ 1.71
BRK1-201ENST00000530758 RAPGEF6Q8TEU7 1601 aa25.75■■□□□ 1.71
BRK1-201ENST00000530758 DIP2BQ9P265 1576 aa25.74■■□□□ 1.71
BRK1-201ENST00000530758 KDM5BQ9UGL1 1544 aa25.74■■□□□ 1.71
BRK1-201ENST00000530758 NPM1P06748 294 aaKnown RBP eCLIP25.72■■□□□ 1.71
BRK1-201ENST00000530758 NUP153P49790 1475 aaKnown RBP25.66■■□□□ 1.7
BRK1-201ENST00000530758 ZCCHC11Q5TAX3 1644 aaKnown RBP25.64■■□□□ 1.7
BRK1-201ENST00000530758 FAM69CQ0P6D2 419 aa25.64■■□□□ 1.7
BRK1-201ENST00000530758 CASKIN1Q8WXD9 1431 aa25.63■■□□□ 1.69
BRK1-201ENST00000530758 ATP10BO94823 1461 aa25.63■■□□□ 1.69
BRK1-201ENST00000530758 HECW1Q76N89 1606 aa25.6■■□□□ 1.69
BRK1-201ENST00000530758 ASXL2Q76L83 1435 aa25.6■■□□□ 1.69
BRK1-201ENST00000530758 FYCO1Q9BQS8 1478 aa25.58■■□□□ 1.69
BRK1-201ENST00000530758 PCF11O94913 1555 aaKnown RBP25.57■■□□□ 1.68
BRK1-201ENST00000530758 VPS8Q8N3P4 1428 aa25.54■■□□□ 1.68
BRK1-201ENST00000530758 LRRIQ1Q96JM4 1722 aa25.54■■□□□ 1.68
BRK1-201ENST00000530758 EPRSP07814 1512 aaKnown RBP25.54■■□□□ 1.68
BRK1-201ENST00000530758 TSPOAP1O95153 1857 aa25.51■■□□□ 1.67
BRK1-201ENST00000530758 GLI2P10070 1586 aa25.51■■□□□ 1.67
BRK1-201ENST00000530758 PPRC1Q5VV67 1664 aaKnown RBP25.48■■□□□ 1.67
BRK1-201ENST00000530758 CCDC18Q5T9S5 1454 aa25.48■■□□□ 1.67
BRK1-201ENST00000530758 ARID3CA6NKF2 412 aa25.47■■□□□ 1.67
BRK1-201ENST00000530758 ATP1B4Q9UN42 357 aaPredicted RBP25.47■■□□□ 1.67
BRK1-201ENST00000530758 CDK13Q14004 1512 aaKnown RBP25.47■■□□□ 1.67
BRK1-201ENST00000530758 WDR7Q9Y4E6 1490 aa25.47■■□□□ 1.67
BRK1-201ENST00000530758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.43■■□□□ 1.66
BRK1-201ENST00000530758 HNRNPUL2Q1KMD3 747 aaKnown RBP25.43■■□□□ 1.66
BRK1-201ENST00000530758 PLEKHD1A6NEE1 506 aa25.42■■□□□ 1.66
BRK1-201ENST00000530758 MAP3K4Q9Y6R4 1608 aa25.41■■□□□ 1.66
BRK1-201ENST00000530758 CDK11AQ9UQ88 783 aaPredicted RBP25.4■■□□□ 1.66
BRK1-201ENST00000530758 KDM6BO15054 1643 aa25.37■■□□□ 1.65
BRK1-201ENST00000530758 MAP3K1Q13233 1512 aa25.37■■□□□ 1.65
BRK1-201ENST00000530758 TROQ12816 1431 aaPredicted RBP25.32■■□□□ 1.64
BRK1-201ENST00000530758 CFAP43Q8NDM7 1665 aa25.32■■□□□ 1.64
BRK1-201ENST00000530758 KCNH8Q96L42 1107 aa25.31■■□□□ 1.64
BRK1-201ENST00000530758 MAGI3Q5TCQ9 1506 aa25.31■■□□□ 1.64
BRK1-201ENST00000530758 TIAM1Q13009 1591 aa25.31■■□□□ 1.64
BRK1-201ENST00000530758 ABCA9Q8IUA7 1624 aa25.28■■□□□ 1.64
BRK1-201ENST00000530758 COL17A1Q9UMD9 1497 aaPredicted RBP25.26■■□□□ 1.63
BRK1-201ENST00000530758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.23■■□□□ 1.63
BRK1-201ENST00000530758 KIF14Q15058 1648 aa25.21■■□□□ 1.63
BRK1-201ENST00000530758 EHBP1L1Q8N3D4 1523 aa25.21■■□□□ 1.63
BRK1-201ENST00000530758 MTUS2Q5JR59 1369 aa25.2■■□□□ 1.63
BRK1-201ENST00000530758 LRRC9Q6ZRR7 1453 aa25.2■■□□□ 1.62
BRK1-201ENST00000530758 CD109Q6YHK3 1445 aa25.2■■□□□ 1.62
BRK1-201ENST00000530758 APLP2Q06481 763 aa25.19■■□□□ 1.62
BRK1-201ENST00000530758 TEX14Q8IWB6 1497 aa25.19■■□□□ 1.62
BRK1-201ENST00000530758 TTC37Q6PGP7 1564 aa25.16■■□□□ 1.62
BRK1-201ENST00000530758 KANK4Q5T7N3 995 aaPredicted RBP25.15■■□□□ 1.62
BRK1-201ENST00000530758 ARAP3Q8WWN8 1544 aa25.12■■□□□ 1.61
BRK1-201ENST00000530758 PLCH2O75038 1416 aa25.12■■□□□ 1.61
BRK1-201ENST00000530758 SUPT6HQ7KZ85 1726 aaKnown RBP25.11■■□□□ 1.61
BRK1-201ENST00000530758 MYO5CQ9NQX4 1742 aa25.1■■□□□ 1.61
BRK1-201ENST00000530758 CDC42BPAQ5VT25 1732 aa25.06■■□□□ 1.6
BRK1-201ENST00000530758 NCOA2Q15596 1464 aa25.06■■□□□ 1.6
BRK1-201ENST00000530758 CDC42BPBQ9Y5S2 1711 aa25.06■■□□□ 1.6
BRK1-201ENST00000530758 PHLDB1Q86UU1 1377 aa25.05■■□□□ 1.6
BRK1-201ENST00000530758 GPATCH8Q9UKJ3 1502 aaKnown RBP25.05■■□□□ 1.6
BRK1-201ENST00000530758 PREX2Q70Z35 1606 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms