RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 SENP3Q9H4L4 574 aaPredicted RBP11.52□□□□□ -0.57
CTNND1-225ENST00000530094 SMARCA4P51532 1647 aa11.49□□□□□ -0.57
CTNND1-225ENST00000530094 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
CTNND1-225ENST00000530094 ABCC8Q09428 1581 aa11.49□□□□□ -0.57
CTNND1-225ENST00000530094 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
CTNND1-225ENST00000530094 RRP7BPQ9NSQ0 103 aa11.48□□□□□ -0.57
CTNND1-225ENST00000530094 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
CTNND1-225ENST00000530094 CEP162Q5TB80 1403 aa11.47□□□□□ -0.57
CTNND1-225ENST00000530094 TONSLQ96HA7 1378 aa11.47□□□□□ -0.57
CTNND1-225ENST00000530094 ACIN1Q9UKV3 1341 aaKnown RBP11.46□□□□□ -0.58
CTNND1-225ENST00000530094 ANP32AP39687 249 aaKnown RBP11.44□□□□□ -0.58
CTNND1-225ENST00000530094 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
CTNND1-225ENST00000530094 FANCD2Q9BXW9 1451 aa11.41□□□□□ -0.58
CTNND1-225ENST00000530094 PPP1R15AO75807 674 aaPredicted RBP11.4□□□□□ -0.58
CTNND1-225ENST00000530094 UPF2Q9HAU5 1272 aaKnown RBP11.4□□□□□ -0.58
CTNND1-225ENST00000530094 TNIKQ9UKE5 1360 aa11.4□□□□□ -0.59
CTNND1-225ENST00000530094 ANP32BQ92688 251 aaKnown RBP11.39□□□□□ -0.59
CTNND1-225ENST00000530094 CARMIL2Q6F5E8 1435 aa11.38□□□□□ -0.59
CTNND1-225ENST00000530094 BCL11AQ9H165 835 aa11.38□□□□□ -0.59
CTNND1-225ENST00000530094 MLECQ14165 292 aa11.38□□□□□ -0.59
CTNND1-225ENST00000530094 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.38□□□□□ -0.59
CTNND1-225ENST00000530094 SCAF1Q9H7N4 1312 aaKnown RBP11.36□□□□□ -0.59
CTNND1-225ENST00000530094 C14orf37Q86TY3 774 aa11.35□□□□□ -0.59
CTNND1-225ENST00000530094 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
CTNND1-225ENST00000530094 CCNB3Q8WWL7 1395 aa11.34□□□□□ -0.59
CTNND1-225ENST00000530094 HSP90AA1P07900 732 aaKnown RBP11.34□□□□□ -0.59
CTNND1-225ENST00000530094 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
CTNND1-225ENST00000530094 RGL3Q3MIN7 710 aa11.33□□□□□ -0.6
CTNND1-225ENST00000530094 CYB5RLQ6IPT4 315 aa11.32□□□□□ -0.6
CTNND1-225ENST00000530094 WDR43Q15061 677 aaKnown RBP eCLIP11.32□□□□□ -0.63e-9■■■□□ 15.6
CTNND1-225ENST00000530094 FHAD1B1AJZ9 1412 aa11.32□□□□□ -0.6
CTNND1-225ENST00000530094 OSCARQ8IYS5 282 aa11.31□□□□□ -0.6
CTNND1-225ENST00000530094 JPH4Q96JJ6 628 aa11.31□□□□□ -0.6
CTNND1-225ENST00000530094 NCAPD3P42695 1498 aa11.3□□□□□ -0.6
CTNND1-225ENST00000530094 CC2D2AQ9P2K1 1620 aa11.29□□□□□ -0.6
CTNND1-225ENST00000530094 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
CTNND1-225ENST00000530094 TMC1Q8TDI8 760 aa11.27□□□□□ -0.6
CTNND1-225ENST00000530094 DNAJC5BQ9UF47 199 aa11.27□□□□□ -0.61
CTNND1-225ENST00000530094 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
CTNND1-225ENST00000530094 ZBTB7CA1YPR0 619 aa11.25□□□□□ -0.61
CTNND1-225ENST00000530094 GGT6Q6P531 493 aa11.25□□□□□ -0.61
CTNND1-225ENST00000530094 RAPGEF2Q9Y4G8 1499 aa11.24□□□□□ -0.61
CTNND1-225ENST00000530094 NESP48681 1621 aa11.23□□□□□ -0.61
CTNND1-225ENST00000530094 HNRNPUQ00839 825 aaKnown RBP eCLIP11.23□□□□□ -0.61
CTNND1-225ENST00000530094 RAD54L2Q9Y4B4 1467 aa11.23□□□□□ -0.61
CTNND1-225ENST00000530094 FGD5Q6ZNL6 1462 aa11.22□□□□□ -0.61
CTNND1-225ENST00000530094 A0A0G2JS52 829 aa11.22□□□□□ -0.61
CTNND1-225ENST00000530094 CDCA8Q53HL2 280 aa11.22□□□□□ -0.61
CTNND1-225ENST00000530094 EFCAB2Q5VUJ9 269 aa11.21□□□□□ -0.61
CTNND1-225ENST00000530094 FAM9BQ8IZU0 186 aa11.21□□□□□ -0.61
CTNND1-225ENST00000530094 HIRIP3Q9BW71 556 aaPredicted RBP11.21□□□□□ -0.62
CTNND1-225ENST00000530094 EIF5BO60841 1220 aaKnown RBP11.21□□□□□ -0.62
CTNND1-225ENST00000530094 FHOD3Q2V2M9 1422 aa11.21□□□□□ -0.62
CTNND1-225ENST00000530094 DDX10Q13206 875 aaKnown RBP11.2□□□□□ -0.62
CTNND1-225ENST00000530094 AQRO60306 1485 aaKnown RBP eCLIP11.2□□□□□ -0.622e-9■■■□□ 18.1
CTNND1-225ENST00000530094 FMN1Q68DA7 1419 aa11.19□□□□□ -0.62
CTNND1-225ENST00000530094 GAPVD1Q14C86 1478 aa11.19□□□□□ -0.62
CTNND1-225ENST00000530094 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
CTNND1-225ENST00000530094 KANK1Q14678 1352 aa11.18□□□□□ -0.62
CTNND1-225ENST00000530094 CDK11BP21127 795 aaKnown RBP11.18□□□□□ -0.62
CTNND1-225ENST00000530094 CFAP53Q96M91 514 aa11.18□□□□□ -0.62
CTNND1-225ENST00000530094 KANK4Q5T7N3 995 aaPredicted RBP11.17□□□□□ -0.62
CTNND1-225ENST00000530094 PTPRGP23470 1445 aa11.17□□□□□ -0.62
CTNND1-225ENST00000530094 EIF4G2P78344 907 aaKnown RBP eCLIP11.17□□□□□ -0.62
CTNND1-225ENST00000530094 FKBP8Q14318 412 aa11.17□□□□□ -0.62
CTNND1-225ENST00000530094 CCDC136Q96JN2 1154 aa11.16□□□□□ -0.62
CTNND1-225ENST00000530094 MRS2Q9HD23 443 aa11.15□□□□□ -0.62
CTNND1-225ENST00000530094 RUSC2Q8N2Y8 1516 aa11.15□□□□□ -0.62
CTNND1-225ENST00000530094 VPS8Q8N3P4 1428 aa11.14□□□□□ -0.63
CTNND1-225ENST00000530094 LMOD2Q6P5Q4 547 aa11.14□□□□□ -0.63
CTNND1-225ENST00000530094 SALL2Q9Y467 1007 aaPredicted RBP11.14□□□□□ -0.63
CTNND1-225ENST00000530094 POGKQ9P215 609 aa11.14□□□□□ -0.63
CTNND1-225ENST00000530094 ARHGAP35Q9NRY4 1499 aa11.14□□□□□ -0.63
CTNND1-225ENST00000530094 HNRNPMP52272 730 aaKnown RBP eCLIP11.14□□□□□ -0.635e-7■■■■□ 21
CTNND1-225ENST00000530094 MRC2Q9UBG0 1479 aa11.12□□□□□ -0.63
CTNND1-225ENST00000530094 KIF3BO15066 747 aa11.11□□□□□ -0.63
CTNND1-225ENST00000530094 SIN3AQ96ST3 1273 aa11.1□□□□□ -0.63
CTNND1-225ENST00000530094 BICRAQ9NZM4 1560 aa11.1□□□□□ -0.63
CTNND1-225ENST00000530094 CARD11Q9BXL7 1154 aa11.1□□□□□ -0.63
CTNND1-225ENST00000530094 HDGFP51858 240 aaKnown RBP11.09□□□□□ -0.63
CTNND1-225ENST00000530094 IGF1RP08069 1367 aa11.09□□□□□ -0.63
CTNND1-225ENST00000530094 SPAG9O60271 1321 aaKnown RBP11.09□□□□□ -0.63
CTNND1-225ENST00000530094 CFTRP13569 1480 aa11.09□□□□□ -0.63
CTNND1-225ENST00000530094 NCLP19338 710 aaKnown RBP11.09□□□□□ -0.63
CTNND1-225ENST00000530094 FAM69CQ0P6D2 419 aa11.09□□□□□ -0.63
CTNND1-225ENST00000530094 ANP32EQ9BTT0 268 aa11.08□□□□□ -0.64
CTNND1-225ENST00000530094 BECN1Q14457 450 aa11.08□□□□□ -0.64
CTNND1-225ENST00000530094 CASC1Q6TDU7 716 aa11.08□□□□□ -0.64
CTNND1-225ENST00000530094 DCAF11Q8TEB1 546 aa11.07□□□□□ -0.64
CTNND1-225ENST00000530094 DDRGK1Q96HY6 314 aa11.07□□□□□ -0.64
CTNND1-225ENST00000530094 HMGXB3Q12766 1538 aa11.07□□□□□ -0.64
CTNND1-225ENST00000530094 CHMP4BQ9H444 224 aaKnown RBP11.07□□□□□ -0.64
CTNND1-225ENST00000530094 KNSTRNQ9Y448 316 aa11.07□□□□□ -0.64
CTNND1-225ENST00000530094 PPM1GO15355 546 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-225ENST00000530094 SAFB2Q14151 953 aaKnown RBP eCLIP11.06□□□□□ -0.64
CTNND1-225ENST00000530094 PKD2Q13563 968 aa11.06□□□□□ -0.64
CTNND1-225ENST00000530094 FOXD1Q16676 465 aa11.06□□□□□ -0.64
CTNND1-225ENST00000530094 PNNQ9H307 717 aaKnown RBP11.06□□□□□ -0.64
CTNND1-225ENST00000530094 NUDCQ9Y266 331 aa11.06□□□□□ -0.64
CTNND1-225ENST00000530094 CCDC18Q5T9S5 1454 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms