RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 CEP170Q5SW79 1584 aa23.87■■□□□ 1.41
UBXN1-209ENST00000528907 CLASP1Q7Z460 1538 aa23.87■■□□□ 1.41
UBXN1-209ENST00000528907 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
UBXN1-209ENST00000528907 FAM9AQ8IZU1 332 aaPredicted RBP23.81■■□□□ 1.4
UBXN1-209ENST00000528907 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
UBXN1-209ENST00000528907 KIAA0586Q9BVV6 1533 aa23.77■■□□□ 1.4
UBXN1-209ENST00000528907 CTTNBP2Q8WZ74 1663 aa23.74■■□□□ 1.39
UBXN1-209ENST00000528907 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
UBXN1-209ENST00000528907 ARAP1Q96P48 1450 aa23.72■■□□□ 1.39
UBXN1-209ENST00000528907 GOLGA3Q08378 1498 aa23.7■■□□□ 1.38
UBXN1-209ENST00000528907 IQGAP2Q13576 1575 aa23.68■■□□□ 1.38
UBXN1-209ENST00000528907 JPH4Q96JJ6 628 aa23.6■■□□□ 1.37
UBXN1-209ENST00000528907 UGGT2Q9NYU1 1516 aa23.59■■□□□ 1.37
UBXN1-209ENST00000528907 PRG4Q92954 1404 aaPredicted RBP23.52■■□□□ 1.36
UBXN1-209ENST00000528907 AEBP2Q6ZN18 517 aaPredicted RBP23.51■■□□□ 1.35
UBXN1-209ENST00000528907 UBTFP17480 764 aaKnown RBP23.49■■□□□ 1.35
UBXN1-209ENST00000528907 ERCC6L2Q5T890 1561 aa23.48■■□□□ 1.35
UBXN1-209ENST00000528907 TNIKQ9UKE5 1360 aa23.48■■□□□ 1.35
UBXN1-209ENST00000528907 DISP1Q96F81 1524 aa23.48■■□□□ 1.35
UBXN1-209ENST00000528907 CARMIL2Q6F5E8 1435 aa23.47■■□□□ 1.35
UBXN1-209ENST00000528907 SAMD9Q5K651 1589 aa23.46■■□□□ 1.35
UBXN1-209ENST00000528907 KIAA0556O60303 1618 aa23.45■■□□□ 1.34
UBXN1-209ENST00000528907 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
UBXN1-209ENST00000528907 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
UBXN1-209ENST00000528907 LOC105371045A0A1W2PR82 267 aa23.33■■□□□ 1.33
UBXN1-209ENST00000528907 ARHGAP35Q9NRY4 1499 aa23.3■■□□□ 1.32
UBXN1-209ENST00000528907 PTPRGP23470 1445 aa23.29■■□□□ 1.32
UBXN1-209ENST00000528907 CLIP1P30622 1438 aa23.25■■□□□ 1.31
UBXN1-209ENST00000528907 CEP162Q5TB80 1403 aa23.23■■□□□ 1.31
UBXN1-209ENST00000528907 FHOD3Q2V2M9 1422 aa23.21■■□□□ 1.31
UBXN1-209ENST00000528907 UHRF1BP1LA0JNW5 1464 aa23.2■■□□□ 1.3
UBXN1-209ENST00000528907 ABCA8O94911 1581 aa23.19■■□□□ 1.3
UBXN1-209ENST00000528907 RANGAP1P46060 587 aaPredicted RBP23.19■■□□□ 1.3
UBXN1-209ENST00000528907 UACAQ9BZF9 1416 aa23.18■■□□□ 1.3
UBXN1-209ENST00000528907 P3H3Q8IVL6 736 aa23.18■■□□□ 1.3
UBXN1-209ENST00000528907 ADCY10Q96PN6 1610 aa23.16■■□□□ 1.3
UBXN1-209ENST00000528907 ABCC2Q92887 1545 aa23.16■■□□□ 1.3
UBXN1-209ENST00000528907 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
UBXN1-209ENST00000528907 PLB1Q6P1J6 1458 aa23.12■■□□□ 1.29
UBXN1-209ENST00000528907 RAPGEF6Q8TEU7 1601 aa23.12■■□□□ 1.29
UBXN1-209ENST00000528907 KDM5BQ9UGL1 1544 aa23.07■■□□□ 1.28
UBXN1-209ENST00000528907 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
UBXN1-209ENST00000528907 CASKIN1Q8WXD9 1431 aa23.02■■□□□ 1.28
UBXN1-209ENST00000528907 HECW1Q76N89 1606 aa23.02■■□□□ 1.28
UBXN1-209ENST00000528907 NUP153P49790 1475 aaKnown RBP23.02■■□□□ 1.28
UBXN1-209ENST00000528907 ZCCHC11Q5TAX3 1644 aaKnown RBP23■■□□□ 1.27
UBXN1-209ENST00000528907 MAPKBP1O60336 1514 aa23■■□□□ 1.27
UBXN1-209ENST00000528907 FYCO1Q9BQS8 1478 aa22.99■■□□□ 1.27
UBXN1-209ENST00000528907 PCF11O94913 1555 aaKnown RBP22.99■■□□□ 1.27
UBXN1-209ENST00000528907 NPM1P06748 294 aaKnown RBP eCLIP22.97■■□□□ 1.27
UBXN1-209ENST00000528907 VPS8Q8N3P4 1428 aa22.97■■□□□ 1.27
UBXN1-209ENST00000528907 ATP10BO94823 1461 aa22.96■■□□□ 1.27
UBXN1-209ENST00000528907 LRRIQ1Q96JM4 1722 aa22.94■■□□□ 1.26
UBXN1-209ENST00000528907 EPRSP07814 1512 aaKnown RBP22.92■■□□□ 1.26
UBXN1-209ENST00000528907 CCDC18Q5T9S5 1454 aa22.91■■□□□ 1.26
UBXN1-209ENST00000528907 KIF13AQ9H1H9 1805 aa22.87■■□□□ 1.25
UBXN1-209ENST00000528907 ASXL2Q76L83 1435 aa22.86■■□□□ 1.25
UBXN1-209ENST00000528907 CDK13Q14004 1512 aaKnown RBP22.84■■□□□ 1.25
UBXN1-209ENST00000528907 WDR7Q9Y4E6 1490 aa22.83■■□□□ 1.25
UBXN1-209ENST00000528907 MAP3K1Q13233 1512 aa22.82■■□□□ 1.24
UBXN1-209ENST00000528907 ABCC10Q5T3U5 1492 aa22.8■■□□□ 1.24
UBXN1-209ENST00000528907 CFAP43Q8NDM7 1665 aa22.79■■□□□ 1.24
UBXN1-209ENST00000528907 ATP1B4Q9UN42 357 aaPredicted RBP22.79■■□□□ 1.24
UBXN1-209ENST00000528907 DIP2BQ9P265 1576 aa22.79■■□□□ 1.24
UBXN1-209ENST00000528907 GLI2P10070 1586 aa22.78■■□□□ 1.24
UBXN1-209ENST00000528907 CDK11AQ9UQ88 783 aaPredicted RBP22.77■■□□□ 1.24
UBXN1-209ENST00000528907 PLEKHD1A6NEE1 506 aa22.76■■□□□ 1.23
UBXN1-209ENST00000528907 ARID3CA6NKF2 412 aa22.76■■□□□ 1.23
UBXN1-209ENST00000528907 TIAM1Q13009 1591 aa22.76■■□□□ 1.23
UBXN1-209ENST00000528907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.75■■□□□ 1.23
UBXN1-209ENST00000528907 HNRNPUL2Q1KMD3 747 aaKnown RBP22.75■■□□□ 1.23
UBXN1-209ENST00000528907 TROQ12816 1431 aaPredicted RBP22.73■■□□□ 1.23
UBXN1-209ENST00000528907 MAGI3Q5TCQ9 1506 aa22.71■■□□□ 1.23
UBXN1-209ENST00000528907 ABCA9Q8IUA7 1624 aa22.69■■□□□ 1.22
UBXN1-209ENST00000528907 FAM69CQ0P6D2 419 aa22.68■■□□□ 1.22
UBXN1-209ENST00000528907 MAP3K4Q9Y6R4 1608 aa22.67■■□□□ 1.22
UBXN1-209ENST00000528907 EHBP1L1Q8N3D4 1523 aa22.67■■□□□ 1.22
UBXN1-209ENST00000528907 KIF14Q15058 1648 aa22.65■■□□□ 1.22
UBXN1-209ENST00000528907 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.63■■□□□ 1.21
UBXN1-209ENST00000528907 LRRC9Q6ZRR7 1453 aa22.63■■□□□ 1.21
UBXN1-209ENST00000528907 MTUS2Q5JR59 1369 aa22.62■■□□□ 1.21
UBXN1-209ENST00000528907 APLP2Q06481 763 aa22.61■■□□□ 1.21
UBXN1-209ENST00000528907 KCNH8Q96L42 1107 aa22.61■■□□□ 1.21
UBXN1-209ENST00000528907 KDM4FA0A1W2PPD8 638 aa22.6■■□□□ 1.21
UBXN1-209ENST00000528907 TTC37Q6PGP7 1564 aa22.58■■□□□ 1.2
UBXN1-209ENST00000528907 KDM6BO15054 1643 aa22.57■■□□□ 1.2
UBXN1-209ENST00000528907 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
UBXN1-209ENST00000528907 PPRC1Q5VV67 1664 aaKnown RBP22.57■■□□□ 1.2
UBXN1-209ENST00000528907 ARAP3Q8WWN8 1544 aa22.56■■□□□ 1.2
UBXN1-209ENST00000528907 CD109Q6YHK3 1445 aa22.56■■□□□ 1.2
UBXN1-209ENST00000528907 MYO5CQ9NQX4 1742 aa22.54■■□□□ 1.2
UBXN1-209ENST00000528907 KANK4Q5T7N3 995 aaPredicted RBP22.53■■□□□ 1.2
UBXN1-209ENST00000528907 ILDR1Q86SU0 546 aaPredicted RBP22.53■■□□□ 1.2
UBXN1-209ENST00000528907 TEX14Q8IWB6 1497 aa22.51■■□□□ 1.19
UBXN1-209ENST00000528907 PLCH2O75038 1416 aa22.5■■□□□ 1.19
UBXN1-209ENST00000528907 CDC42BPAQ5VT25 1732 aa22.5■■□□□ 1.19
UBXN1-209ENST00000528907 PREX2Q70Z35 1606 aa22.49■■□□□ 1.19
UBXN1-209ENST00000528907 TSPOAP1O95153 1857 aa22.49■■□□□ 1.19
UBXN1-209ENST00000528907 NCOA2Q15596 1464 aa22.49■■□□□ 1.19
UBXN1-209ENST00000528907 ITSN2Q9NZM3 1697 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms