RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
VPS26B-204ENST00000527586 NUP160Q12769 1436 aa13.78□□□□□ -0.2
VPS26B-204ENST00000527586 PRG4Q92954 1404 aaPredicted RBP13.78□□□□□ -0.2
VPS26B-204ENST00000527586 FGD5Q6ZNL6 1462 aa13.78□□□□□ -0.2
VPS26B-204ENST00000527586 COL17A1Q9UMD9 1497 aaPredicted RBP13.78□□□□□ -0.2
VPS26B-204ENST00000527586 CCDC88BA6NC98 1476 aa13.77□□□□□ -0.21
VPS26B-204ENST00000527586 GRIN2AQ12879 1464 aa13.77□□□□□ -0.21
VPS26B-204ENST00000527586 SHROOM2Q13796 1616 aa13.77□□□□□ -0.21
VPS26B-204ENST00000527586 PBRM1Q86U86 1689 aa13.71□□□□□ -0.21
VPS26B-204ENST00000527586 JPH4Q96JJ6 628 aa13.7□□□□□ -0.22
VPS26B-204ENST00000527586 ADCY10Q96PN6 1610 aa13.7□□□□□ -0.22
VPS26B-204ENST00000527586 PPRC1Q5VV67 1664 aaKnown RBP13.66□□□□□ -0.22
VPS26B-204ENST00000527586 PCF11O94913 1555 aaKnown RBP13.63□□□□□ -0.23
VPS26B-204ENST00000527586 PTPRMP28827 1452 aa13.62□□□□□ -0.23
VPS26B-204ENST00000527586 HSPA2P54652 639 aa13.6□□□□□ -0.23
VPS26B-204ENST00000527586 GLI2P10070 1586 aa13.59□□□□□ -0.23
VPS26B-204ENST00000527586 ADAMTS12P58397 1594 aa13.58□□□□□ -0.24
VPS26B-204ENST00000527586 CUX1P39880 1505 aa13.57□□□□□ -0.24
VPS26B-204ENST00000527586 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
VPS26B-204ENST00000527586 ASXL2Q76L83 1435 aa13.56□□□□□ -0.24
VPS26B-204ENST00000527586 TEX14Q8IWB6 1497 aa13.55□□□□□ -0.24
VPS26B-204ENST00000527586 FHAD1B1AJZ9 1412 aa13.55□□□□□ -0.24
VPS26B-204ENST00000527586 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
VPS26B-204ENST00000527586 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
VPS26B-204ENST00000527586 KIF21BO75037 1637 aa13.49□□□□□ -0.25
VPS26B-204ENST00000527586 TTBK1Q5TCY1 1321 aaPredicted RBP13.46□□□□□ -0.25
VPS26B-204ENST00000527586 ABCC2Q92887 1545 aa13.46□□□□□ -0.25
VPS26B-204ENST00000527586 EPRSP07814 1512 aaKnown RBP13.45□□□□□ -0.26
VPS26B-204ENST00000527586 ADAMTSL3P82987 1691 aa13.44□□□□□ -0.26
VPS26B-204ENST00000527586 MAP3K4Q9Y6R4 1608 aa13.44□□□□□ -0.26
VPS26B-204ENST00000527586 PTPRGP23470 1445 aa13.42□□□□□ -0.26
VPS26B-204ENST00000527586 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
VPS26B-204ENST00000527586 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
VPS26B-204ENST00000527586 KIAA0586Q9BVV6 1533 aa13.39□□□□□ -0.27
VPS26B-204ENST00000527586 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
VPS26B-204ENST00000527586 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
VPS26B-204ENST00000527586 MADDQ8WXG6 1647 aa13.35□□□□□ -0.27
VPS26B-204ENST00000527586 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.28
VPS26B-204ENST00000527586 CUL7Q14999 1698 aa13.31□□□□□ -0.28
VPS26B-204ENST00000527586 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
VPS26B-204ENST00000527586 CD109Q6YHK3 1445 aa13.3□□□□□ -0.28
VPS26B-204ENST00000527586 TNIKQ9UKE5 1360 aa13.29□□□□□ -0.28
VPS26B-204ENST00000527586 YEATS2Q9ULM3 1422 aa13.29□□□□□ -0.28
VPS26B-204ENST00000527586 UHRF1BP1LA0JNW5 1464 aa13.29□□□□□ -0.28
VPS26B-204ENST00000527586 MAGI3Q5TCQ9 1506 aa13.29□□□□□ -0.28
VPS26B-204ENST00000527586 BCORL1Q5H9F3 1711 aa13.28□□□□□ -0.28
VPS26B-204ENST00000527586 PHF23Q9BUL5 403 aaPredicted RBP13.27□□□□□ -0.29
VPS26B-204ENST00000527586 MED1Q15648 1581 aaPredicted RBP13.27□□□□□ -0.29
VPS26B-204ENST00000527586 UACAQ9BZF9 1416 aa13.26□□□□□ -0.29
VPS26B-204ENST00000527586 RIMS1Q86UR5 1692 aaKnown RBP13.25□□□□□ -0.29
VPS26B-204ENST00000527586 IQSEC2Q5JU85 1478 aa13.24□□□□□ -0.29
VPS26B-204ENST00000527586 UBAP1LF5GYI3 381 aa13.24□□□□□ -0.29
VPS26B-204ENST00000527586 KDM5BQ9UGL1 1544 aa13.23□□□□□ -0.29
VPS26B-204ENST00000527586 KCNH8Q96L42 1107 aa13.21□□□□□ -0.29
VPS26B-204ENST00000527586 ARAP3Q8WWN8 1544 aa13.21□□□□□ -0.29
VPS26B-204ENST00000527586 WDR7Q9Y4E6 1490 aa13.21□□□□□ -0.3
VPS26B-204ENST00000527586 CARMIL2Q6F5E8 1435 aa13.2□□□□□ -0.3
VPS26B-204ENST00000527586 LTBP4Q8N2S1 1624 aa13.2□□□□□ -0.3
VPS26B-204ENST00000527586 RAPGEF3O95398 923 aa13.19□□□□□ -0.3
VPS26B-204ENST00000527586 PTPRTO14522 1441 aa13.17□□□□□ -0.3
VPS26B-204ENST00000527586 HSPA1LP34931 641 aa13.17□□□□□ -0.3
VPS26B-204ENST00000527586 ZCCHC11Q5TAX3 1644 aaKnown RBP13.17□□□□□ -0.3
VPS26B-204ENST00000527586 STRCQ7RTU9 1775 aa13.15□□□□□ -0.3
VPS26B-204ENST00000527586 CFAP43Q8NDM7 1665 aa13.14□□□□□ -0.31
VPS26B-204ENST00000527586 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
VPS26B-204ENST00000527586 MLECQ14165 292 aa13.09□□□□□ -0.31
VPS26B-204ENST00000527586 POGZQ7Z3K3 1410 aa13.09□□□□□ -0.31
VPS26B-204ENST00000527586 PHLDB1Q86UU1 1377 aa13.08□□□□□ -0.31
VPS26B-204ENST00000527586 CEBPAP49715 358 aaPredicted RBP13.06□□□□□ -0.32
VPS26B-204ENST00000527586 PIP4K2BP78356 416 aa13.06□□□□□ -0.32
VPS26B-204ENST00000527586 PREX1Q8TCU6 1659 aa13.05□□□□□ -0.32
VPS26B-204ENST00000527586 UHRF1BP1Q6BDS2 1440 aa13.05□□□□□ -0.32
VPS26B-204ENST00000527586 RGS17Q9UGC6 210 aaPredicted RBP13.02□□□□□ -0.33
VPS26B-204ENST00000527586 ZNF335Q9H4Z2 1342 aaPredicted RBP13.02□□□□□ -0.33
VPS26B-204ENST00000527586 FANCAO15360 1455 aa13.02□□□□□ -0.33
VPS26B-204ENST00000527586 TTC37Q6PGP7 1564 aa13.01□□□□□ -0.33
VPS26B-204ENST00000527586 DISP1Q96F81 1524 aa13□□□□□ -0.33
VPS26B-204ENST00000527586 FRMPD1Q5SYB0 1578 aa12.99□□□□□ -0.33
VPS26B-204ENST00000527586 ARHGEF40Q8TER5 1519 aa12.99□□□□□ -0.33
VPS26B-204ENST00000527586 AKNAQ7Z591 1439 aa12.97□□□□□ -0.33
VPS26B-204ENST00000527586 IGF1RP08069 1367 aa12.96□□□□□ -0.33
VPS26B-204ENST00000527586 BIVM-ERCC5R4GMW8 1640 aa12.96□□□□□ -0.33
VPS26B-204ENST00000527586 TOM1O60784 492 aa12.95□□□□□ -0.34
VPS26B-204ENST00000527586 NEO1Q92859 1461 aa12.95□□□□□ -0.34
VPS26B-204ENST00000527586 FER1L4A9Z1Z3 1794 aa12.94□□□□□ -0.34
VPS26B-204ENST00000527586 NCOA1Q15788 1441 aa12.93□□□□□ -0.34
VPS26B-204ENST00000527586 IQGAP2Q13576 1575 aa12.93□□□□□ -0.34
VPS26B-204ENST00000527586 POTEAQ6S8J7 498 aa12.91□□□□□ -0.34
VPS26B-204ENST00000527586 SIGLEC1Q9BZZ2 1709 aa12.91□□□□□ -0.34
VPS26B-204ENST00000527586 SENP3Q9H4L4 574 aaPredicted RBP12.9□□□□□ -0.34
VPS26B-204ENST00000527586 SRCAPQ6ZRS2 3230 aa12.89□□□□□ -0.35
VPS26B-204ENST00000527586 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
VPS26B-204ENST00000527586 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
VPS26B-204ENST00000527586 ARHGEF12Q9NZN5 1544 aa12.88□□□□□ -0.35
VPS26B-204ENST00000527586 FHOD3Q2V2M9 1422 aa12.87□□□□□ -0.35
VPS26B-204ENST00000527586 ZFYVE16Q7Z3T8 1539 aa12.85□□□□□ -0.35
VPS26B-204ENST00000527586 ARID3CA6NKF2 412 aa12.85□□□□□ -0.35
VPS26B-204ENST00000527586 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
VPS26B-204ENST00000527586 ABCA9Q8IUA7 1624 aa12.84□□□□□ -0.35
VPS26B-204ENST00000527586 CARMIL1Q5VZK9 1371 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms