RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 ERICH3Q5RHP9 1530 aa17.71■□□□□ 0.43
CHMP1B-201ENST00000526991 ARHGAP35Q9NRY4 1499 aa17.71■□□□□ 0.43
CHMP1B-201ENST00000526991 MIER1Q8N108 512 aa17.71■□□□□ 0.43
CHMP1B-201ENST00000526991 BCL11AQ9H165 835 aa17.68■□□□□ 0.42
CHMP1B-201ENST00000526991 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
CHMP1B-201ENST00000526991 PDS5BQ9NTI5 1447 aa17.64■□□□□ 0.42
CHMP1B-201ENST00000526991 FHOD3Q2V2M9 1422 aa17.64■□□□□ 0.41
CHMP1B-201ENST00000526991 KIF21AQ7Z4S6 1674 aa17.62■□□□□ 0.41
CHMP1B-201ENST00000526991 FAM50AQ14320 339 aaKnown RBP17.6■□□□□ 0.41
CHMP1B-201ENST00000526991 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.41
CHMP1B-201ENST00000526991 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
CHMP1B-201ENST00000526991 ABCA10Q8WWZ4 1543 aa17.57■□□□□ 0.4
CHMP1B-201ENST00000526991 FBLN2P98095 1184 aa17.56■□□□□ 0.4
CHMP1B-201ENST00000526991 GAPVD1Q14C86 1478 aa17.54■□□□□ 0.4
CHMP1B-201ENST00000526991 DHX57Q6P158 1386 aaKnown RBP17.52■□□□□ 0.39
CHMP1B-201ENST00000526991 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
CHMP1B-201ENST00000526991 ZNF608Q9ULD9 1512 aaPredicted RBP17.46■□□□□ 0.39
CHMP1B-201ENST00000526991 CCNB3Q8WWL7 1395 aa17.44■□□□□ 0.38
CHMP1B-201ENST00000526991 PHLDB1Q86UU1 1377 aa17.43■□□□□ 0.38
CHMP1B-201ENST00000526991 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
CHMP1B-201ENST00000526991 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
CHMP1B-201ENST00000526991 RRBP1Q9P2E9 1410 aaKnown RBP17.36■□□□□ 0.37
CHMP1B-201ENST00000526991 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
CHMP1B-201ENST00000526991 LRRC9Q6ZRR7 1453 aa17.35■□□□□ 0.37
CHMP1B-201ENST00000526991 TIAM1Q13009 1591 aa17.35■□□□□ 0.37
CHMP1B-201ENST00000526991 SIN3AQ96ST3 1273 aa17.34■□□□□ 0.37
CHMP1B-201ENST00000526991 ABCA5Q8WWZ7 1642 aa17.34■□□□□ 0.37
CHMP1B-201ENST00000526991 RAB3GAP2Q9H2M9 1393 aa17.34■□□□□ 0.37
CHMP1B-201ENST00000526991 MTUS2Q5JR59 1369 aa17.33■□□□□ 0.36
CHMP1B-201ENST00000526991 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.36
CHMP1B-201ENST00000526991 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
CHMP1B-201ENST00000526991 CUL7Q14999 1698 aa17.31■□□□□ 0.36
CHMP1B-201ENST00000526991 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
CHMP1B-201ENST00000526991 HIRIP3Q9BW71 556 aaPredicted RBP17.31■□□□□ 0.36
CHMP1B-201ENST00000526991 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
CHMP1B-201ENST00000526991 CLSPNQ9HAW4 1339 aa17.29■□□□□ 0.36
CHMP1B-201ENST00000526991 CTTNBP2Q8WZ74 1663 aa17.27■□□□□ 0.36
CHMP1B-201ENST00000526991 KCNH8Q96L42 1107 aa17.27■□□□□ 0.35
CHMP1B-201ENST00000526991 ERICH6Q7L0X2 663 aa17.25■□□□□ 0.35
CHMP1B-201ENST00000526991 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
CHMP1B-201ENST00000526991 FMN1Q68DA7 1419 aa17.23■□□□□ 0.35
CHMP1B-201ENST00000526991 CASKIN1Q8WXD9 1431 aa17.23■□□□□ 0.35
CHMP1B-201ENST00000526991 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
CHMP1B-201ENST00000526991 RRP7BPQ9NSQ0 103 aa17.21■□□□□ 0.35
CHMP1B-201ENST00000526991 PBRM1Q86U86 1689 aa17.21■□□□□ 0.35
CHMP1B-201ENST00000526991 SETD5Q9C0A6 1442 aa17.2■□□□□ 0.34
CHMP1B-201ENST00000526991 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
CHMP1B-201ENST00000526991 FYCO1Q9BQS8 1478 aa17.19■□□□□ 0.34
CHMP1B-201ENST00000526991 EFCAB5A4FU69 1503 aa17.18■□□□□ 0.34
CHMP1B-201ENST00000526991 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
CHMP1B-201ENST00000526991 CDK13Q14004 1512 aaKnown RBP17.17■□□□□ 0.34
CHMP1B-201ENST00000526991 ADAMTS12P58397 1594 aa17.14■□□□□ 0.33
CHMP1B-201ENST00000526991 MAPKBP1O60336 1514 aa17.13■□□□□ 0.33
CHMP1B-201ENST00000526991 WDR62O43379 1518 aa17.13■□□□□ 0.33
CHMP1B-201ENST00000526991 EIF4G3O43432 1585 aaKnown RBP17.13■□□□□ 0.33
CHMP1B-201ENST00000526991 IQGAP2Q13576 1575 aa17.13■□□□□ 0.33
CHMP1B-201ENST00000526991 ZNF777Q9ULD5 760 aaPredicted RBP17.13■□□□□ 0.33
CHMP1B-201ENST00000526991 LRRIQ1Q96JM4 1722 aa17.12■□□□□ 0.33
CHMP1B-201ENST00000526991 CFAP43Q8NDM7 1665 aa17.11■□□□□ 0.33
CHMP1B-201ENST00000526991 ZNF644Q9H582 1327 aaPredicted RBP17.11■□□□□ 0.33
CHMP1B-201ENST00000526991 NCOA2Q15596 1464 aa17.11■□□□□ 0.33
CHMP1B-201ENST00000526991 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
CHMP1B-201ENST00000526991 PTPRKQ15262 1439 aa17.1■□□□□ 0.33
CHMP1B-201ENST00000526991 SAMD9Q5K651 1589 aa17.1■□□□□ 0.33
CHMP1B-201ENST00000526991 MAGI3Q5TCQ9 1506 aa17.1■□□□□ 0.33
CHMP1B-201ENST00000526991 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
CHMP1B-201ENST00000526991 JPH4Q96JJ6 628 aa17.08■□□□□ 0.33
CHMP1B-201ENST00000526991 MAP3K1Q13233 1512 aa17.07■□□□□ 0.32
CHMP1B-201ENST00000526991 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
CHMP1B-201ENST00000526991 FOXD1Q16676 465 aa17.07■□□□□ 0.32
CHMP1B-201ENST00000526991 THOC2Q8NI27 1593 aaKnown RBP17.03■□□□□ 0.32
CHMP1B-201ENST00000526991 BCANQ96GW7 911 aa17.03■□□□□ 0.32
CHMP1B-201ENST00000526991 SUPT16HQ9Y5B9 1047 aaKnown RBP17.02■□□□□ 0.32
CHMP1B-201ENST00000526991 EPRSP07814 1512 aaKnown RBP17.02■□□□□ 0.32
CHMP1B-201ENST00000526991 PLB1Q6P1J6 1458 aa17.02■□□□□ 0.32
CHMP1B-201ENST00000526991 SLC24A1O60721 1099 aa17.02■□□□□ 0.31
CHMP1B-201ENST00000526991 MYOM3Q5VTT5 1437 aa17.01■□□□□ 0.31
CHMP1B-201ENST00000526991 DISP1Q96F81 1524 aa17■□□□□ 0.31
CHMP1B-201ENST00000526991 KIAA0586Q9BVV6 1533 aa16.99■□□□□ 0.31
CHMP1B-201ENST00000526991 PPP1R15AO75807 674 aaPredicted RBP16.99■□□□□ 0.31
CHMP1B-201ENST00000526991 PRG4Q92954 1404 aaPredicted RBP16.98■□□□□ 0.31
CHMP1B-201ENST00000526991 CEP170Q5SW79 1584 aa16.96■□□□□ 0.31
CHMP1B-201ENST00000526991 TONSLQ96HA7 1378 aa16.96■□□□□ 0.31
CHMP1B-201ENST00000526991 SYNJ2O15056 1496 aa16.95■□□□□ 0.3
CHMP1B-201ENST00000526991 CCDC18Q5T9S5 1454 aa16.94■□□□□ 0.3
CHMP1B-201ENST00000526991 SUPT6HQ7KZ85 1726 aaKnown RBP16.93■□□□□ 0.3
CHMP1B-201ENST00000526991 NUP153P49790 1475 aaKnown RBP16.93■□□□□ 0.3
CHMP1B-201ENST00000526991 KIAA0556O60303 1618 aa16.92■□□□□ 0.3
CHMP1B-201ENST00000526991 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
CHMP1B-201ENST00000526991 EHBP1L1Q8N3D4 1523 aa16.92■□□□□ 0.3
CHMP1B-201ENST00000526991 CFDP1Q9UEE9 299 aaPredicted RBP16.92■□□□□ 0.3
CHMP1B-201ENST00000526991 CDK11AQ9UQ88 783 aaPredicted RBP16.91■□□□□ 0.3
CHMP1B-201ENST00000526991 UGGT2Q9NYU1 1516 aa16.91■□□□□ 0.3
CHMP1B-201ENST00000526991 MAGI1Q96QZ7 1491 aaPredicted RBP16.9■□□□□ 0.3
CHMP1B-201ENST00000526991 PTPN23Q9H3S7 1636 aa16.9■□□□□ 0.3
CHMP1B-201ENST00000526991 NAIPQ13075 1403 aa16.89■□□□□ 0.29
CHMP1B-201ENST00000526991 ANP32CO43423 234 aa16.88■□□□□ 0.29
CHMP1B-201ENST00000526991 FKBP8Q14318 412 aa16.86■□□□□ 0.29
CHMP1B-201ENST00000526991 PLEKHD1A6NEE1 506 aa16.85■□□□□ 0.29
CHMP1B-201ENST00000526991 CARMIL2Q6F5E8 1435 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms