RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 LRRC9Q6ZRR7 1453 aa24.43■■□□□ 1.5
CCDC90B-203ENST00000525503 DHX57Q6P158 1386 aaKnown RBP24.43■■□□□ 1.5
CCDC90B-203ENST00000525503 CFAP43Q8NDM7 1665 aa24.38■■□□□ 1.49
CCDC90B-203ENST00000525503 CTTNBP2Q8WZ74 1663 aa24.38■■□□□ 1.49
CCDC90B-203ENST00000525503 ABCA5Q8WWZ7 1642 aa24.38■■□□□ 1.49
CCDC90B-203ENST00000525503 PCF11O94913 1555 aaKnown RBP24.37■■□□□ 1.49
CCDC90B-203ENST00000525503 AQRO60306 1485 aaKnown RBP eCLIP24.36■■□□□ 1.49
CCDC90B-203ENST00000525503 FYCO1Q9BQS8 1478 aa24.36■■□□□ 1.49
CCDC90B-203ENST00000525503 FHOD3Q2V2M9 1422 aa24.34■■□□□ 1.49
CCDC90B-203ENST00000525503 GAPVD1Q14C86 1478 aa24.34■■□□□ 1.49
CCDC90B-203ENST00000525503 CASKIN1Q8WXD9 1431 aa24.33■■□□□ 1.49
CCDC90B-203ENST00000525503 P3H3Q8IVL6 736 aa24.33■■□□□ 1.49
CCDC90B-203ENST00000525503 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
CCDC90B-203ENST00000525503 KIF21AQ7Z4S6 1674 aa24.29■■□□□ 1.48
CCDC90B-203ENST00000525503 FMN1Q68DA7 1419 aa24.29■■□□□ 1.48
CCDC90B-203ENST00000525503 PHLDB1Q86UU1 1377 aa24.27■■□□□ 1.48
CCDC90B-203ENST00000525503 DNAJC5BQ9UF47 199 aa24.26■■□□□ 1.47
CCDC90B-203ENST00000525503 ITGAEP38570 1179 aa24.24■■□□□ 1.47
CCDC90B-203ENST00000525503 ATP1B4Q9UN42 357 aaPredicted RBP24.24■■□□□ 1.47
CCDC90B-203ENST00000525503 TARBP1Q13395 1621 aaKnown RBP24.22■■□□□ 1.47
CCDC90B-203ENST00000525503 CENPBP07199 599 aaPredicted RBP24.22■■□□□ 1.47
CCDC90B-203ENST00000525503 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
CCDC90B-203ENST00000525503 ACIN1Q9UKV3 1341 aaKnown RBP24.21■■□□□ 1.47
CCDC90B-203ENST00000525503 SAMD9Q5K651 1589 aa24.2■■□□□ 1.46
CCDC90B-203ENST00000525503 RAB3GAP2Q9H2M9 1393 aa24.19■■□□□ 1.46
CCDC90B-203ENST00000525503 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
CCDC90B-203ENST00000525503 SNAPC4Q5SXM2 1469 aa24.17■■□□□ 1.46
CCDC90B-203ENST00000525503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.16■■□□□ 1.46
CCDC90B-203ENST00000525503 FAM50AQ14320 339 aaKnown RBP24.14■■□□□ 1.46
CCDC90B-203ENST00000525503 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
CCDC90B-203ENST00000525503 THOC2Q8NI27 1593 aaKnown RBP24.1■■□□□ 1.45
CCDC90B-203ENST00000525503 NEUROD1Q13562 356 aa24.1■■□□□ 1.45
CCDC90B-203ENST00000525503 PBRM1Q86U86 1689 aa24.06■■□□□ 1.44
CCDC90B-203ENST00000525503 GRIN2BQ13224 1484 aa24.06■■□□□ 1.44
CCDC90B-203ENST00000525503 MTUS2Q5JR59 1369 aa24.06■■□□□ 1.44
CCDC90B-203ENST00000525503 MAPKBP1O60336 1514 aa24.04■■□□□ 1.44
CCDC90B-203ENST00000525503 MIER1Q8N108 512 aa24.04■■□□□ 1.44
CCDC90B-203ENST00000525503 FGD6Q6ZV73 1430 aa24.03■■□□□ 1.44
CCDC90B-203ENST00000525503 ADAMTS12P58397 1594 aa24.01■■□□□ 1.43
CCDC90B-203ENST00000525503 IFT140Q96RY7 1462 aa23.97■■□□□ 1.43
CCDC90B-203ENST00000525503 IQGAP2Q13576 1575 aa23.97■■□□□ 1.43
CCDC90B-203ENST00000525503 EHBP1L1Q8N3D4 1523 aa23.97■■□□□ 1.43
CCDC90B-203ENST00000525503 CCDC18Q5T9S5 1454 aa23.97■■□□□ 1.43
CCDC90B-203ENST00000525503 LRRIQ1Q96JM4 1722 aa23.94■■□□□ 1.42
CCDC90B-203ENST00000525503 NCOA2Q15596 1464 aa23.94■■□□□ 1.42
CCDC90B-203ENST00000525503 WDR62O43379 1518 aa23.93■■□□□ 1.42
CCDC90B-203ENST00000525503 SUPT6HQ7KZ85 1726 aaKnown RBP23.92■■□□□ 1.42
CCDC90B-203ENST00000525503 MYOM3Q5VTT5 1437 aa23.92■■□□□ 1.42
CCDC90B-203ENST00000525503 HECW1Q76N89 1606 aa23.9■■□□□ 1.42
CCDC90B-203ENST00000525503 TIMELESSQ9UNS1 1208 aa23.9■■□□□ 1.42
CCDC90B-203ENST00000525503 UGGT2Q9NYU1 1516 aa23.86■■□□□ 1.41
CCDC90B-203ENST00000525503 ARHGEF11O15085 1522 aa23.85■■□□□ 1.41
CCDC90B-203ENST00000525503 HFM1A2PYH4 1435 aa23.84■■□□□ 1.41
CCDC90B-203ENST00000525503 YTHDC1Q96MU7 727 aaKnown RBP23.84■■□□□ 1.41
CCDC90B-203ENST00000525503 GTF3C3Q9Y5Q9 886 aa23.84■■□□□ 1.41
CCDC90B-203ENST00000525503 ZNF608Q9ULD9 1512 aaPredicted RBP23.83■■□□□ 1.41
CCDC90B-203ENST00000525503 EPRSP07814 1512 aaKnown RBP23.8■■□□□ 1.4
CCDC90B-203ENST00000525503 MAGI3Q5TCQ9 1506 aa23.8■■□□□ 1.4
CCDC90B-203ENST00000525503 PTPRKQ15262 1439 aa23.79■■□□□ 1.4
CCDC90B-203ENST00000525503 PTPN23Q9H3S7 1636 aa23.79■■□□□ 1.4
CCDC90B-203ENST00000525503 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
CCDC90B-203ENST00000525503 SIN3AQ96ST3 1273 aa23.78■■□□□ 1.4
CCDC90B-203ENST00000525503 UACAQ9BZF9 1416 aa23.76■■□□□ 1.39
CCDC90B-203ENST00000525503 TCOF1Q13428 1488 aaKnown RBP23.76■■□□□ 1.39
CCDC90B-203ENST00000525503 NAIPQ13075 1403 aa23.74■■□□□ 1.39
CCDC90B-203ENST00000525503 ERCC6Q03468 1493 aa23.73■■□□□ 1.39
CCDC90B-203ENST00000525503 EIF4G3O43432 1585 aaKnown RBP23.72■■□□□ 1.39
CCDC90B-203ENST00000525503 GRIN2AQ12879 1464 aa23.72■■□□□ 1.39
CCDC90B-203ENST00000525503 MIA2Q96PC5 1412 aa23.7■■□□□ 1.39
CCDC90B-203ENST00000525503 KIAA0556O60303 1618 aa23.7■■□□□ 1.38
CCDC90B-203ENST00000525503 CDK13Q14004 1512 aaKnown RBP23.7■■□□□ 1.38
CCDC90B-203ENST00000525503 DISP1Q96F81 1524 aa23.68■■□□□ 1.38
CCDC90B-203ENST00000525503 MAGI1Q96QZ7 1491 aaPredicted RBP23.67■■□□□ 1.38
CCDC90B-203ENST00000525503 PPP1R15AO75807 674 aaPredicted RBP23.66■■□□□ 1.38
CCDC90B-203ENST00000525503 AKNAQ7Z591 1439 aa23.66■■□□□ 1.38
CCDC90B-203ENST00000525503 PELP1Q8IZL8 1130 aaKnown RBP23.63■■□□□ 1.37
CCDC90B-203ENST00000525503 TONSLQ96HA7 1378 aa23.61■■□□□ 1.37
CCDC90B-203ENST00000525503 GCC2Q8IWJ2 1684 aa23.6■■□□□ 1.37
CCDC90B-203ENST00000525503 SYNJ2O15056 1496 aa23.59■■□□□ 1.37
CCDC90B-203ENST00000525503 RAPGEF6Q8TEU7 1601 aa23.59■■□□□ 1.37
CCDC90B-203ENST00000525503 NUP153P49790 1475 aaKnown RBP23.58■■□□□ 1.36
CCDC90B-203ENST00000525503 CDK11AQ9UQ88 783 aaPredicted RBP23.57■■□□□ 1.36
CCDC90B-203ENST00000525503 CHMP7Q8WUX9 453 aaPredicted RBP23.57■■□□□ 1.36
CCDC90B-203ENST00000525503 ARID3CA6NKF2 412 aa23.55■■□□□ 1.36
CCDC90B-203ENST00000525503 RRP7BPQ9NSQ0 103 aa23.55■■□□□ 1.36
CCDC90B-203ENST00000525503 CHIC2Q9UKJ5 165 aa23.53■■□□□ 1.36
CCDC90B-203ENST00000525503 CEP170Q5SW79 1584 aa23.52■■□□□ 1.36
CCDC90B-203ENST00000525503 ROCK1Q13464 1354 aa23.49■■□□□ 1.35
CCDC90B-203ENST00000525503 CARMIL2Q6F5E8 1435 aa23.49■■□□□ 1.35
CCDC90B-203ENST00000525503 NUP160Q12769 1436 aa23.47■■□□□ 1.35
CCDC90B-203ENST00000525503 DAPK1P53355 1430 aa23.47■■□□□ 1.35
CCDC90B-203ENST00000525503 DDX10Q13206 875 aaKnown RBP23.45■■□□□ 1.35
CCDC90B-203ENST00000525503 TRIM52Q96A61 297 aa23.45■■□□□ 1.35
CCDC90B-203ENST00000525503 TROQ12816 1431 aaPredicted RBP23.45■■□□□ 1.34
CCDC90B-203ENST00000525503 DNMT1P26358 1616 aaKnown RBP23.44■■□□□ 1.34
CCDC90B-203ENST00000525503 FBLN2P98095 1184 aa23.43■■□□□ 1.34
CCDC90B-203ENST00000525503 ABCC5O15440 1437 aa23.42■■□□□ 1.34
CCDC90B-203ENST00000525503 KDM6BO15054 1643 aa23.42■■□□□ 1.34
CCDC90B-203ENST00000525503 JPH4Q96JJ6 628 aa23.41■■□□□ 1.34
CCDC90B-203ENST00000525503 DENND4BO75064 1496 aaPredicted RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms