RNA–Protein interactions for RNA: ENST00000524794.5

NFRKB-203, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 1 (best) BASIC

Gene NFRKB, Length 4,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-203ENST00000524794 TNIKQ9UKE5 1360 aa11.37□□□□□ -0.59
NFRKB-203ENST00000524794 RTN4Q9NQC3 1192 aaKnown RBP11.37□□□□□ -0.59
NFRKB-203ENST00000524794 NCAPD3P42695 1498 aa11.35□□□□□ -0.59
NFRKB-203ENST00000524794 ANP32AP39687 249 aaKnown RBP11.34□□□□□ -0.59
NFRKB-203ENST00000524794 MIER1Q8N108 512 aa11.32□□□□□ -0.6
NFRKB-203ENST00000524794 FANCD2Q9BXW9 1451 aa11.32□□□□□ -0.6
NFRKB-203ENST00000524794 PLEKHD1A6NEE1 506 aa11.32□□□□□ -0.6
NFRKB-203ENST00000524794 RUSC2Q8N2Y8 1516 aa11.32□□□□□ -0.6
NFRKB-203ENST00000524794 AEBP2Q6ZN18 517 aaPredicted RBP11.31□□□□□ -0.6
NFRKB-203ENST00000524794 SLC4A1APQ9BWU0 796 aaKnown RBP11.31□□□□□ -0.6
NFRKB-203ENST00000524794 PLPPR3Q6T4P5 718 aa11.31□□□□□ -0.6
NFRKB-203ENST00000524794 BICRAQ9NZM4 1560 aa11.31□□□□□ -0.6
NFRKB-203ENST00000524794 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.3□□□□□ -0.63e-8■■□□□ 13.6
NFRKB-203ENST00000524794 RRP7BPQ9NSQ0 103 aa11.28□□□□□ -0.6
NFRKB-203ENST00000524794 TSPY4P0CV99 314 aa11.28□□□□□ -0.6
NFRKB-203ENST00000524794 TSPY10P0CW01 314 aa11.28□□□□□ -0.6
NFRKB-203ENST00000524794 DEKP35659 375 aaKnown RBP11.26□□□□□ -0.61
NFRKB-203ENST00000524794 NESP48681 1621 aa11.26□□□□□ -0.61
NFRKB-203ENST00000524794 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.25□□□□□ -0.61
NFRKB-203ENST00000524794 CC2D2AQ9P2K1 1620 aa11.25□□□□□ -0.61
NFRKB-203ENST00000524794 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
NFRKB-203ENST00000524794 SUPT16HQ9Y5B9 1047 aaKnown RBP11.24□□□□□ -0.61
NFRKB-203ENST00000524794 CCDC136Q96JN2 1154 aa11.23□□□□□ -0.61
NFRKB-203ENST00000524794 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
NFRKB-203ENST00000524794 CFDP1Q9UEE9 299 aaPredicted RBP11.23□□□□□ -0.61
NFRKB-203ENST00000524794 RAD54L2Q9Y4B4 1467 aa11.22□□□□□ -0.61
NFRKB-203ENST00000524794 KANK4Q5T7N3 995 aaPredicted RBP11.21□□□□□ -0.61
NFRKB-203ENST00000524794 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
NFRKB-203ENST00000524794 RAPGEF2Q9Y4G8 1499 aa11.21□□□□□ -0.62
NFRKB-203ENST00000524794 ESF1Q9H501 851 aaKnown RBP11.2□□□□□ -0.62
NFRKB-203ENST00000524794 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
NFRKB-203ENST00000524794 FGD5Q6ZNL6 1462 aa11.17□□□□□ -0.62
NFRKB-203ENST00000524794 ANP32CO43423 234 aa11.17□□□□□ -0.62
NFRKB-203ENST00000524794 JPH4Q96JJ6 628 aa11.17□□□□□ -0.62
NFRKB-203ENST00000524794 SENP3Q9H4L4 574 aaPredicted RBP11.17□□□□□ -0.62
NFRKB-203ENST00000524794 RBM19Q9Y4C8 960 aaKnown RBP11.16□□□□□ -0.62
NFRKB-203ENST00000524794 IGF1RP08069 1367 aa11.15□□□□□ -0.62
NFRKB-203ENST00000524794 CFTRP13569 1480 aa11.15□□□□□ -0.62
NFRKB-203ENST00000524794 AQRO60306 1485 aaKnown RBP eCLIP11.14□□□□□ -0.631e-7■■■■□ 21.6
NFRKB-203ENST00000524794 KDM2AQ9Y2K7 1162 aa11.14□□□□□ -0.63
NFRKB-203ENST00000524794 FHAD1B1AJZ9 1412 aa11.13□□□□□ -0.63
NFRKB-203ENST00000524794 TONSLQ96HA7 1378 aa11.13□□□□□ -0.63
NFRKB-203ENST00000524794 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
NFRKB-203ENST00000524794 FHOD3Q2V2M9 1422 aa11.13□□□□□ -0.63
NFRKB-203ENST00000524794 VPS8Q8N3P4 1428 aa11.12□□□□□ -0.63
NFRKB-203ENST00000524794 HIRIP3Q9BW71 556 aaPredicted RBP11.11□□□□□ -0.63
NFRKB-203ENST00000524794 ANO8Q9HCE9 1232 aaPredicted RBP11.11□□□□□ -0.63
NFRKB-203ENST00000524794 UNC13AQ9UPW8 1703 aa11.1□□□□□ -0.63
NFRKB-203ENST00000524794 CARMIL2Q6F5E8 1435 aa11.09□□□□□ -0.63
NFRKB-203ENST00000524794 IRX6P78412 446 aaPredicted RBP11.09□□□□□ -0.63
NFRKB-203ENST00000524794 GAPVD1Q14C86 1478 aa11.09□□□□□ -0.63
NFRKB-203ENST00000524794 NEFMP07197 916 aa11.09□□□□□ -0.63
NFRKB-203ENST00000524794 TRHP20396 242 aaPredicted RBP11.09□□□□□ -0.63
NFRKB-203ENST00000524794 HMGXB3Q12766 1538 aa11.08□□□□□ -0.64
NFRKB-203ENST00000524794 CCNB3Q8WWL7 1395 aa11.08□□□□□ -0.64
NFRKB-203ENST00000524794 RGL3Q3MIN7 710 aa11.08□□□□□ -0.64
NFRKB-203ENST00000524794 ARXQ96QS3 562 aa11.06□□□□□ -0.64
NFRKB-203ENST00000524794 CYB5RLQ6IPT4 315 aa11.05□□□□□ -0.64
NFRKB-203ENST00000524794 SIN3AQ96ST3 1273 aa11.05□□□□□ -0.64
NFRKB-203ENST00000524794 SYNJ1O43426 1573 aa11.04□□□□□ -0.64
NFRKB-203ENST00000524794 ARID4BQ4LE39 1312 aaPredicted RBP11.04□□□□□ -0.64
NFRKB-203ENST00000524794 ERICH6BQ5W0A0 696 aa11.04□□□□□ -0.64
NFRKB-203ENST00000524794 NOP58Q9Y2X3 529 aaKnown RBP11.04□□□□□ -0.64
NFRKB-203ENST00000524794 DDX10Q13206 875 aaKnown RBP11.03□□□□□ -0.64
NFRKB-203ENST00000524794 FMN1Q68DA7 1419 aa11.03□□□□□ -0.64
NFRKB-203ENST00000524794 OSCARQ8IYS5 282 aa11.03□□□□□ -0.64
NFRKB-203ENST00000524794 HNRNPUQ00839 825 aaKnown RBP eCLIP11.02□□□□□ -0.64
NFRKB-203ENST00000524794 NAP1L5Q96NT1 182 aaPredicted RBP11□□□□□ -0.65
NFRKB-203ENST00000524794 CUX1P39880 1505 aa11□□□□□ -0.65
NFRKB-203ENST00000524794 TOPBP1Q92547 1522 aa11□□□□□ -0.65
NFRKB-203ENST00000524794 MLECQ14165 292 aa11□□□□□ -0.65
NFRKB-203ENST00000524794 POLA1P09884 1462 aaPredicted RBP10.99□□□□□ -0.65
NFRKB-203ENST00000524794 PTPRGP23470 1445 aa10.97□□□□□ -0.65
NFRKB-203ENST00000524794 HNRNPMP52272 730 aaKnown RBP eCLIP10.97□□□□□ -0.654e-6■■□□□ 12.7
NFRKB-203ENST00000524794 FOXD1Q16676 465 aa10.97□□□□□ -0.65
NFRKB-203ENST00000524794 VSIG10Q8N0Z9 540 aa10.97□□□□□ -0.65
NFRKB-203ENST00000524794 LAS1LQ9Y4W2 734 aaKnown RBP10.97□□□□□ -0.65
NFRKB-203ENST00000524794 MRC2Q9UBG0 1479 aa10.96□□□□□ -0.65
NFRKB-203ENST00000524794 ARHGAP35Q9NRY4 1499 aa10.96□□□□□ -0.66
NFRKB-203ENST00000524794 PKNOX2Q96KN3 472 aa10.95□□□□□ -0.66
NFRKB-203ENST00000524794 GGT6Q6P531 493 aa10.95□□□□□ -0.66
NFRKB-203ENST00000524794 PEG3Q9GZU2 1588 aa10.95□□□□□ -0.66
NFRKB-203ENST00000524794 EFCAB2Q5VUJ9 269 aa10.95□□□□□ -0.66
NFRKB-203ENST00000524794 SALL2Q9Y467 1007 aaPredicted RBP10.94□□□□□ -0.66
NFRKB-203ENST00000524794 KIF21BO75037 1637 aa10.93□□□□□ -0.66
NFRKB-203ENST00000524794 GRIN2BQ13224 1484 aa10.93□□□□□ -0.66
NFRKB-203ENST00000524794 PODXL2Q9NZ53 605 aa10.91□□□□□ -0.66
NFRKB-203ENST00000524794 ANP32BQ92688 251 aaKnown RBP10.91□□□□□ -0.66
NFRKB-203ENST00000524794 PPM1GO15355 546 aaPredicted RBP10.91□□□□□ -0.66
NFRKB-203ENST00000524794 PPP1R15AO75807 674 aaPredicted RBP10.9□□□□□ -0.66
NFRKB-203ENST00000524794 TOP2BQ02880 1626 aa10.9□□□□□ -0.66
NFRKB-203ENST00000524794 TNNT2P45379 298 aaPredicted RBP10.89□□□□□ -0.67
NFRKB-203ENST00000524794 EIF4G2P78344 907 aaKnown RBP eCLIP10.89□□□□□ -0.67
NFRKB-203ENST00000524794 PKD2Q13563 968 aa10.88□□□□□ -0.67
NFRKB-203ENST00000524794 SLC24A1O60721 1099 aa10.88□□□□□ -0.67
NFRKB-203ENST00000524794 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
NFRKB-203ENST00000524794 SETD5Q9C0A6 1442 aa10.87□□□□□ -0.67
NFRKB-203ENST00000524794 ZNF644Q9H582 1327 aaPredicted RBP10.87□□□□□ -0.67
NFRKB-203ENST00000524794 RAB3GAP2Q9H2M9 1393 aa10.87□□□□□ -0.67
NFRKB-203ENST00000524794 TIMELESSQ9UNS1 1208 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms