RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 CFDP1Q9UEE9 299 aaPredicted RBP18.08■□□□□ 0.48
PCDHGB1-201ENST00000523390 KDM2AQ9Y2K7 1162 aa18.08■□□□□ 0.48
PCDHGB1-201ENST00000523390 EIF4G1Q04637 1599 aaKnown RBP18.06■□□□□ 0.48
PCDHGB1-201ENST00000523390 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
PCDHGB1-201ENST00000523390 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
PCDHGB1-201ENST00000523390 KANK4Q5T7N3 995 aaPredicted RBP18.03■□□□□ 0.48
PCDHGB1-201ENST00000523390 ESF1Q9H501 851 aaKnown RBP18.03■□□□□ 0.48
PCDHGB1-201ENST00000523390 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
PCDHGB1-201ENST00000523390 PLPPR3Q6T4P5 718 aa18■□□□□ 0.47
PCDHGB1-201ENST00000523390 CCNB3Q8WWL7 1395 aa18■□□□□ 0.47
PCDHGB1-201ENST00000523390 STAG3Q9UJ98 1225 aa17.99■□□□□ 0.47
PCDHGB1-201ENST00000523390 MIER1Q8N108 512 aa17.98■□□□□ 0.47
PCDHGB1-201ENST00000523390 DAXXQ9UER7 740 aaPredicted RBP17.98■□□□□ 0.47
PCDHGB1-201ENST00000523390 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.47
PCDHGB1-201ENST00000523390 RAPGEF2Q9Y4G8 1499 aa17.96■□□□□ 0.47
PCDHGB1-201ENST00000523390 CLSPNQ9HAW4 1339 aa17.95■□□□□ 0.46
PCDHGB1-201ENST00000523390 FAM9BQ8IZU0 186 aa17.93■□□□□ 0.46
PCDHGB1-201ENST00000523390 HNRNPUQ00839 825 aaKnown RBP eCLIP17.93■□□□□ 0.46
PCDHGB1-201ENST00000523390 RGL3Q3MIN7 710 aa17.91■□□□□ 0.46
PCDHGB1-201ENST00000523390 EIF4G2P78344 907 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCDHGB1-201ENST00000523390 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
PCDHGB1-201ENST00000523390 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
PCDHGB1-201ENST00000523390 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
PCDHGB1-201ENST00000523390 FHOD3Q2V2M9 1422 aa17.83■□□□□ 0.45
PCDHGB1-201ENST00000523390 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
PCDHGB1-201ENST00000523390 MRS2Q9HD23 443 aa17.81■□□□□ 0.44
PCDHGB1-201ENST00000523390 TMC1Q8TDI8 760 aa17.81■□□□□ 0.44
PCDHGB1-201ENST00000523390 FKBP8Q14318 412 aa17.79■□□□□ 0.44
PCDHGB1-201ENST00000523390 FMN1Q68DA7 1419 aa17.79■□□□□ 0.44
PCDHGB1-201ENST00000523390 ARHGAP35Q9NRY4 1499 aa17.79■□□□□ 0.44
PCDHGB1-201ENST00000523390 NEFMP07197 916 aa17.79■□□□□ 0.44
PCDHGB1-201ENST00000523390 CANXP27824 592 aaKnown RBP17.79■□□□□ 0.44
PCDHGB1-201ENST00000523390 SLC24A1O60721 1099 aa17.77■□□□□ 0.43
PCDHGB1-201ENST00000523390 CARMIL2Q6F5E8 1435 aa17.75■□□□□ 0.43
PCDHGB1-201ENST00000523390 SETD5Q9C0A6 1442 aa17.74■□□□□ 0.43
PCDHGB1-201ENST00000523390 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
PCDHGB1-201ENST00000523390 BCL11AQ9H165 835 aa17.72■□□□□ 0.43
PCDHGB1-201ENST00000523390 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
PCDHGB1-201ENST00000523390 IGF1RP08069 1367 aa17.7■□□□□ 0.42
PCDHGB1-201ENST00000523390 CARD11Q9BXL7 1154 aa17.69■□□□□ 0.42
PCDHGB1-201ENST00000523390 RAB3GAP2Q9H2M9 1393 aa17.69■□□□□ 0.42
PCDHGB1-201ENST00000523390 FOXD1Q16676 465 aa17.69■□□□□ 0.42
PCDHGB1-201ENST00000523390 JPH4Q96JJ6 628 aa17.68■□□□□ 0.42
PCDHGB1-201ENST00000523390 SENP3-EIF4A1A0A087X0R7 540 aa17.66■□□□□ 0.42
PCDHGB1-201ENST00000523390 WDR43Q15061 677 aaKnown RBP eCLIP17.62■□□□□ 0.41
PCDHGB1-201ENST00000523390 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
PCDHGB1-201ENST00000523390 ARID4BQ4LE39 1312 aaPredicted RBP17.61■□□□□ 0.41
PCDHGB1-201ENST00000523390 PKD2Q13563 968 aa17.6■□□□□ 0.41
PCDHGB1-201ENST00000523390 DCAF11Q8TEB1 546 aa17.6■□□□□ 0.41
PCDHGB1-201ENST00000523390 ZBTB47Q9UFB7 747 aaPredicted RBP17.6■□□□□ 0.41
PCDHGB1-201ENST00000523390 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
PCDHGB1-201ENST00000523390 IRX6P78412 446 aaPredicted RBP17.6■□□□□ 0.41
PCDHGB1-201ENST00000523390 CFTRP13569 1480 aa17.58■□□□□ 0.4
PCDHGB1-201ENST00000523390 NESP48681 1621 aa17.58■□□□□ 0.4
PCDHGB1-201ENST00000523390 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
PCDHGB1-201ENST00000523390 TIMELESSQ9UNS1 1208 aa17.56■□□□□ 0.4
PCDHGB1-201ENST00000523390 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
PCDHGB1-201ENST00000523390 MPHOSPH9Q99550 1183 aa17.55■□□□□ 0.4
PCDHGB1-201ENST00000523390 BICRAQ9NZM4 1560 aa17.55■□□□□ 0.4
PCDHGB1-201ENST00000523390 HNRNPMP52272 730 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCDHGB1-201ENST00000523390 EFCAB2Q5VUJ9 269 aa17.54■□□□□ 0.4
PCDHGB1-201ENST00000523390 AQRO60306 1485 aaKnown RBP eCLIP17.53■□□□□ 0.4
PCDHGB1-201ENST00000523390 NUP155O75694 1391 aa17.51■□□□□ 0.39
PCDHGB1-201ENST00000523390 GGT6Q6P531 493 aa17.51■□□□□ 0.39
PCDHGB1-201ENST00000523390 CC2D2AQ9P2K1 1620 aa17.5■□□□□ 0.39
PCDHGB1-201ENST00000523390 CCDC18Q5T9S5 1454 aa17.5■□□□□ 0.39
PCDHGB1-201ENST00000523390 MLECQ14165 292 aa17.49■□□□□ 0.39
PCDHGB1-201ENST00000523390 KNSTRNQ9Y448 316 aa17.49■□□□□ 0.39
PCDHGB1-201ENST00000523390 HSPA5P11021 654 aaKnown RBP17.48■□□□□ 0.39
PCDHGB1-201ENST00000523390 ANKRD30AQ9BXX3 1397 aa17.48■□□□□ 0.39
PCDHGB1-201ENST00000523390 CCDC136Q96JN2 1154 aa17.48■□□□□ 0.39
PCDHGB1-201ENST00000523390 CDCA8Q53HL2 280 aa17.47■□□□□ 0.39
PCDHGB1-201ENST00000523390 NPM2Q86SE8 214 aaKnown RBP17.47■□□□□ 0.39
PCDHGB1-201ENST00000523390 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
PCDHGB1-201ENST00000523390 PLEKHG5O94827 1062 aa17.46■□□□□ 0.39
PCDHGB1-201ENST00000523390 KANK1Q14678 1352 aa17.46■□□□□ 0.39
PCDHGB1-201ENST00000523390 KIF21BO75037 1637 aa17.45■□□□□ 0.38
PCDHGB1-201ENST00000523390 PTPRGP23470 1445 aa17.44■□□□□ 0.38
PCDHGB1-201ENST00000523390 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
PCDHGB1-201ENST00000523390 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
PCDHGB1-201ENST00000523390 L3MBTL2Q969R5 705 aa17.42■□□□□ 0.38
PCDHGB1-201ENST00000523390 CUX1P39880 1505 aa17.41■□□□□ 0.38
PCDHGB1-201ENST00000523390 CC2D1BQ5T0F9 858 aaKnown RBP17.41■□□□□ 0.38
PCDHGB1-201ENST00000523390 POGKQ9P215 609 aa17.4■□□□□ 0.38
PCDHGB1-201ENST00000523390 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
PCDHGB1-201ENST00000523390 SUPT16HQ9Y5B9 1047 aaKnown RBP17.4■□□□□ 0.38
PCDHGB1-201ENST00000523390 KIF3BO15066 747 aa17.4■□□□□ 0.38
PCDHGB1-201ENST00000523390 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
PCDHGB1-201ENST00000523390 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.38■□□□□ 0.37
PCDHGB1-201ENST00000523390 ARAP1Q96P48 1450 aa17.38■□□□□ 0.37
PCDHGB1-201ENST00000523390 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
PCDHGB1-201ENST00000523390 TNNT2P45379 298 aaPredicted RBP17.38■□□□□ 0.37
PCDHGB1-201ENST00000523390 PPM1GO15355 546 aaPredicted RBP17.37■□□□□ 0.37
PCDHGB1-201ENST00000523390 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
PCDHGB1-201ENST00000523390 SPAG9O60271 1321 aaKnown RBP17.37■□□□□ 0.37
PCDHGB1-201ENST00000523390 TMF1P82094 1093 aa17.37■□□□□ 0.37
PCDHGB1-201ENST00000523390 TOPBP1Q92547 1522 aa17.36■□□□□ 0.37
PCDHGB1-201ENST00000523390 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
PCDHGB1-201ENST00000523390 SAFB2Q14151 953 aaKnown RBP eCLIP17.35■□□□□ 0.37
PCDHGB1-201ENST00000523390 POLA1P09884 1462 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms