RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 FHOD3Q2V2M9 1422 aa15.97■□□□□ 0.15
RAB11FIP1-204ENST00000522774 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
RAB11FIP1-204ENST00000522774 PDS5BQ9NTI5 1447 aa15.97■□□□□ 0.15
RAB11FIP1-204ENST00000522774 LRRC9Q6ZRR7 1453 aa15.97■□□□□ 0.15
RAB11FIP1-204ENST00000522774 KIF21AQ7Z4S6 1674 aa15.96■□□□□ 0.15
RAB11FIP1-204ENST00000522774 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.15
RAB11FIP1-204ENST00000522774 CTTNBP2Q8WZ74 1663 aa15.95■□□□□ 0.14
RAB11FIP1-204ENST00000522774 ABCA5Q8WWZ7 1642 aa15.95■□□□□ 0.14
RAB11FIP1-204ENST00000522774 ITGAEP38570 1179 aa15.94■□□□□ 0.14
RAB11FIP1-204ENST00000522774 CFAP43Q8NDM7 1665 aa15.94■□□□□ 0.14
RAB11FIP1-204ENST00000522774 EFCAB5A4FU69 1503 aa15.93■□□□□ 0.14
RAB11FIP1-204ENST00000522774 PHLDB1Q86UU1 1377 aa15.92■□□□□ 0.14
RAB11FIP1-204ENST00000522774 CLSPNQ9HAW4 1339 aa15.92■□□□□ 0.14
RAB11FIP1-204ENST00000522774 ATP1B4Q9UN42 357 aaPredicted RBP15.91■□□□□ 0.14
RAB11FIP1-204ENST00000522774 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
RAB11FIP1-204ENST00000522774 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
RAB11FIP1-204ENST00000522774 FYCO1Q9BQS8 1478 aa15.89■□□□□ 0.13
RAB11FIP1-204ENST00000522774 CASKIN1Q8WXD9 1431 aa15.87■□□□□ 0.13
RAB11FIP1-204ENST00000522774 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
RAB11FIP1-204ENST00000522774 AQRO60306 1485 aaKnown RBP eCLIP15.86■□□□□ 0.134e-7■■□□□ 11.6
RAB11FIP1-204ENST00000522774 RAB3GAP2Q9H2M9 1393 aa15.84■□□□□ 0.13
RAB11FIP1-204ENST00000522774 NEUROD1Q13562 356 aa15.83■□□□□ 0.13
RAB11FIP1-204ENST00000522774 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.12
RAB11FIP1-204ENST00000522774 ACIN1Q9UKV3 1341 aaKnown RBP15.82■□□□□ 0.12
RAB11FIP1-204ENST00000522774 SAMD9Q5K651 1589 aa15.82■□□□□ 0.12
RAB11FIP1-204ENST00000522774 FAM50AQ14320 339 aaKnown RBP15.82■□□□□ 0.12
RAB11FIP1-204ENST00000522774 FMN1Q68DA7 1419 aa15.82■□□□□ 0.12
RAB11FIP1-204ENST00000522774 SETD5Q9C0A6 1442 aa15.79■□□□□ 0.12
RAB11FIP1-204ENST00000522774 MIER1Q8N108 512 aa15.78■□□□□ 0.12
RAB11FIP1-204ENST00000522774 MAPKBP1O60336 1514 aa15.77■□□□□ 0.12
RAB11FIP1-204ENST00000522774 PBRM1Q86U86 1689 aa15.77■□□□□ 0.11
RAB11FIP1-204ENST00000522774 LRRIQ1Q96JM4 1722 aa15.77■□□□□ 0.11
RAB11FIP1-204ENST00000522774 MRC2Q9UBG0 1479 aa15.76■□□□□ 0.11
RAB11FIP1-204ENST00000522774 CENPBP07199 599 aaPredicted RBP15.74■□□□□ 0.11
RAB11FIP1-204ENST00000522774 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
RAB11FIP1-204ENST00000522774 MTUS2Q5JR59 1369 aa15.72■□□□□ 0.11
RAB11FIP1-204ENST00000522774 FGD6Q6ZV73 1430 aa15.71■□□□□ 0.11
RAB11FIP1-204ENST00000522774 ADAMTS12P58397 1594 aa15.71■□□□□ 0.11
RAB11FIP1-204ENST00000522774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.7■□□□□ 0.1
RAB11FIP1-204ENST00000522774 YTHDC1Q96MU7 727 aaKnown RBP15.69■□□□□ 0.1
RAB11FIP1-204ENST00000522774 THOC2Q8NI27 1593 aaKnown RBP15.68■□□□□ 0.1
RAB11FIP1-204ENST00000522774 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
RAB11FIP1-204ENST00000522774 IQGAP2Q13576 1575 aa15.67■□□□□ 0.1
RAB11FIP1-204ENST00000522774 NCOA2Q15596 1464 aa15.66■□□□□ 0.1
RAB11FIP1-204ENST00000522774 MAGI3Q5TCQ9 1506 aa15.64■□□□□ 0.09
RAB11FIP1-204ENST00000522774 PTPRKQ15262 1439 aa15.64■□□□□ 0.09
RAB11FIP1-204ENST00000522774 SIN3AQ96ST3 1273 aa15.64■□□□□ 0.09
RAB11FIP1-204ENST00000522774 WDR62O43379 1518 aa15.63■□□□□ 0.09
RAB11FIP1-204ENST00000522774 EHBP1L1Q8N3D4 1523 aa15.63■□□□□ 0.09
RAB11FIP1-204ENST00000522774 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
RAB11FIP1-204ENST00000522774 SUPT6HQ7KZ85 1726 aaKnown RBP15.63■□□□□ 0.09
RAB11FIP1-204ENST00000522774 GTF3C3Q9Y5Q9 886 aa15.63■□□□□ 0.09
RAB11FIP1-204ENST00000522774 MYOM3Q5VTT5 1437 aa15.63■□□□□ 0.09
RAB11FIP1-204ENST00000522774 UGGT2Q9NYU1 1516 aa15.6■□□□□ 0.09
RAB11FIP1-204ENST00000522774 CCDC18Q5T9S5 1454 aa15.6■□□□□ 0.09
RAB11FIP1-204ENST00000522774 HECW1Q76N89 1606 aa15.6■□□□□ 0.09
RAB11FIP1-204ENST00000522774 ARHGEF11O15085 1522 aa15.59■□□□□ 0.09
RAB11FIP1-204ENST00000522774 HFM1A2PYH4 1435 aa15.57■□□□□ 0.08
RAB11FIP1-204ENST00000522774 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
RAB11FIP1-204ENST00000522774 CDK13Q14004 1512 aaKnown RBP15.57■□□□□ 0.08
RAB11FIP1-204ENST00000522774 PTPN23Q9H3S7 1636 aa15.57■□□□□ 0.08
RAB11FIP1-204ENST00000522774 EIF4G3O43432 1585 aaKnown RBP15.55■□□□□ 0.08
RAB11FIP1-204ENST00000522774 ARID3CA6NKF2 412 aa15.54■□□□□ 0.08
RAB11FIP1-204ENST00000522774 NAIPQ13075 1403 aa15.54■□□□□ 0.08
RAB11FIP1-204ENST00000522774 KIAA0586Q9BVV6 1533 aa15.52■□□□□ 0.08
RAB11FIP1-204ENST00000522774 ERCC6Q03468 1493 aa15.52■□□□□ 0.08
RAB11FIP1-204ENST00000522774 DISP1Q96F81 1524 aa15.52■□□□□ 0.08
RAB11FIP1-204ENST00000522774 GRIN2AQ12879 1464 aa15.51■□□□□ 0.07
RAB11FIP1-204ENST00000522774 KIAA0556O60303 1618 aa15.51■□□□□ 0.07
RAB11FIP1-204ENST00000522774 UACAQ9BZF9 1416 aa15.51■□□□□ 0.07
RAB11FIP1-204ENST00000522774 TCOF1Q13428 1488 aaKnown RBP15.5■□□□□ 0.07
RAB11FIP1-204ENST00000522774 TIMELESSQ9UNS1 1208 aa15.49■□□□□ 0.07
RAB11FIP1-204ENST00000522774 CHIC2Q9UKJ5 165 aa15.47■□□□□ 0.07
RAB11FIP1-204ENST00000522774 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
RAB11FIP1-204ENST00000522774 RRP7BPQ9NSQ0 103 aa15.46■□□□□ 0.07
RAB11FIP1-204ENST00000522774 NUP153P49790 1475 aaKnown RBP15.45■□□□□ 0.06
RAB11FIP1-204ENST00000522774 MIA2Q96PC5 1412 aa15.44■□□□□ 0.06
RAB11FIP1-204ENST00000522774 MAGI1Q96QZ7 1491 aaPredicted RBP15.43■□□□□ 0.06
RAB11FIP1-204ENST00000522774 GCC2Q8IWJ2 1684 aa15.43■□□□□ 0.06
RAB11FIP1-204ENST00000522774 CEP170Q5SW79 1584 aa15.43■□□□□ 0.06
RAB11FIP1-204ENST00000522774 RAPGEF6Q8TEU7 1601 aa15.43■□□□□ 0.06
RAB11FIP1-204ENST00000522774 KDM6BO15054 1643 aa15.42■□□□□ 0.06
RAB11FIP1-204ENST00000522774 TONSLQ96HA7 1378 aa15.42■□□□□ 0.06
RAB11FIP1-204ENST00000522774 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
RAB11FIP1-204ENST00000522774 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
RAB11FIP1-204ENST00000522774 HIRIP3Q9BW71 556 aaPredicted RBP15.4■□□□□ 0.06
RAB11FIP1-204ENST00000522774 AKNAQ7Z591 1439 aa15.39■□□□□ 0.05
RAB11FIP1-204ENST00000522774 FBLN2P98095 1184 aa15.39■□□□□ 0.05
RAB11FIP1-204ENST00000522774 DENND4BO75064 1496 aaPredicted RBP15.39■□□□□ 0.05
RAB11FIP1-204ENST00000522774 DDX10Q13206 875 aaKnown RBP15.38■□□□□ 0.05
RAB11FIP1-204ENST00000522774 PLB1Q6P1J6 1458 aa15.36■□□□□ 0.05
RAB11FIP1-204ENST00000522774 KDM5BQ9UGL1 1544 aa15.36■□□□□ 0.05
RAB11FIP1-204ENST00000522774 ZNF644Q9H582 1327 aaPredicted RBP15.36■□□□□ 0.05
RAB11FIP1-204ENST00000522774 TRIM52Q96A61 297 aa15.35■□□□□ 0.05
RAB11FIP1-204ENST00000522774 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
RAB11FIP1-204ENST00000522774 DAPK1P53355 1430 aa15.35■□□□□ 0.05
RAB11FIP1-204ENST00000522774 NUP160Q12769 1436 aa15.34■□□□□ 0.05
RAB11FIP1-204ENST00000522774 PRG4Q92954 1404 aaPredicted RBP15.34■□□□□ 0.05
RAB11FIP1-204ENST00000522774 DNMT1P26358 1616 aaKnown RBP15.33■□□□□ 0.04
RAB11FIP1-204ENST00000522774 ABCC5O15440 1437 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms