RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 LMTK3Q96Q04 1460 aa14.64□□□□□ -0.07
HMBOX1-208ENST00000521516 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
HMBOX1-208ENST00000521516 ABCA10Q8WWZ4 1543 aa14.63□□□□□ -0.07
HMBOX1-208ENST00000521516 PRG4Q92954 1404 aaPredicted RBP14.62□□□□□ -0.07
HMBOX1-208ENST00000521516 ADAMTS12P58397 1594 aa14.62□□□□□ -0.07
HMBOX1-208ENST00000521516 TSPOAP1O95153 1857 aa14.6□□□□□ -0.07
HMBOX1-208ENST00000521516 ADCY10Q96PN6 1610 aa14.58□□□□□ -0.08
HMBOX1-208ENST00000521516 SOCS7O14512 581 aa14.56□□□□□ -0.08
HMBOX1-208ENST00000521516 FHAD1B1AJZ9 1412 aa14.55□□□□□ -0.08
HMBOX1-208ENST00000521516 JPH4Q96JJ6 628 aa14.55□□□□□ -0.08
HMBOX1-208ENST00000521516 PPRC1Q5VV67 1664 aaKnown RBP14.5□□□□□ -0.09
HMBOX1-208ENST00000521516 COL17A1Q9UMD9 1497 aaPredicted RBP14.49□□□□□ -0.09
HMBOX1-208ENST00000521516 ILDR2Q71H61 639 aa14.49□□□□□ -0.09
HMBOX1-208ENST00000521516 GLI2P10070 1586 aa14.46□□□□□ -0.09
HMBOX1-208ENST00000521516 TOP2BQ02880 1626 aa14.45□□□□□ -0.1
HMBOX1-208ENST00000521516 RUSC2Q8N2Y8 1516 aa14.43□□□□□ -0.1
HMBOX1-208ENST00000521516 ERICH3Q5RHP9 1530 aa14.43□□□□□ -0.1
HMBOX1-208ENST00000521516 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
HMBOX1-208ENST00000521516 PLB1Q6P1J6 1458 aa14.38□□□□□ -0.11
HMBOX1-208ENST00000521516 DISP3Q9P2K9 1392 aa14.37□□□□□ -0.11
HMBOX1-208ENST00000521516 ASXL2Q76L83 1435 aa14.36□□□□□ -0.11
HMBOX1-208ENST00000521516 ABCC2Q92887 1545 aa14.34□□□□□ -0.11
HMBOX1-208ENST00000521516 TEX14Q8IWB6 1497 aa14.34□□□□□ -0.11
HMBOX1-208ENST00000521516 MAP3K4Q9Y6R4 1608 aa14.32□□□□□ -0.12
HMBOX1-208ENST00000521516 PTPRGP23470 1445 aa14.29□□□□□ -0.12
HMBOX1-208ENST00000521516 EPRSP07814 1512 aaKnown RBP14.29□□□□□ -0.12
HMBOX1-208ENST00000521516 KIAA0586Q9BVV6 1533 aa14.28□□□□□ -0.12
HMBOX1-208ENST00000521516 UHRF1BP1LA0JNW5 1464 aa14.25□□□□□ -0.13
HMBOX1-208ENST00000521516 PTPRMP28827 1452 aa14.25□□□□□ -0.13
HMBOX1-208ENST00000521516 PCF11O94913 1555 aaKnown RBP14.24□□□□□ -0.13
HMBOX1-208ENST00000521516 CERKQ8TCT0 537 aa14.24□□□□□ -0.13
HMBOX1-208ENST00000521516 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
HMBOX1-208ENST00000521516 CUL7Q14999 1698 aa14.22□□□□□ -0.13
HMBOX1-208ENST00000521516 KIF21BO75037 1637 aa14.21□□□□□ -0.14
HMBOX1-208ENST00000521516 SPATA31D1Q6ZQQ2 1576 aa14.2□□□□□ -0.14
HMBOX1-208ENST00000521516 ADAMTSL3P82987 1691 aa14.2□□□□□ -0.14
HMBOX1-208ENST00000521516 TNIKQ9UKE5 1360 aa14.2□□□□□ -0.14
HMBOX1-208ENST00000521516 KDM5BQ9UGL1 1544 aa14.18□□□□□ -0.14
HMBOX1-208ENST00000521516 UACAQ9BZF9 1416 aa14.16□□□□□ -0.14
HMBOX1-208ENST00000521516 MAGI3Q5TCQ9 1506 aa14.15□□□□□ -0.14
HMBOX1-208ENST00000521516 CARMIL2Q6F5E8 1435 aa14.14□□□□□ -0.15
HMBOX1-208ENST00000521516 TTBK1Q5TCY1 1321 aaPredicted RBP14.12□□□□□ -0.15
HMBOX1-208ENST00000521516 ZCCHC11Q5TAX3 1644 aaKnown RBP14.1□□□□□ -0.15
HMBOX1-208ENST00000521516 WDR7Q9Y4E6 1490 aa14.09□□□□□ -0.15
HMBOX1-208ENST00000521516 CD109Q6YHK3 1445 aa14.08□□□□□ -0.15
HMBOX1-208ENST00000521516 ARAP3Q8WWN8 1544 aa14.07□□□□□ -0.16
HMBOX1-208ENST00000521516 CFAP43Q8NDM7 1665 aa14.06□□□□□ -0.16
HMBOX1-208ENST00000521516 HSPA2P54652 639 aa14.06□□□□□ -0.16
HMBOX1-208ENST00000521516 MADDQ8WXG6 1647 aa14.05□□□□□ -0.16
HMBOX1-208ENST00000521516 BCORL1Q5H9F3 1711 aa14.05□□□□□ -0.16
HMBOX1-208ENST00000521516 IGF1RP08069 1367 aa14.05□□□□□ -0.16
HMBOX1-208ENST00000521516 DISP1Q96F81 1524 aa14.02□□□□□ -0.16
HMBOX1-208ENST00000521516 IQGAP2Q13576 1575 aa13.99□□□□□ -0.17
HMBOX1-208ENST00000521516 RIMS1Q86UR5 1692 aaKnown RBP13.96□□□□□ -0.17
HMBOX1-208ENST00000521516 PHLDB1Q86UU1 1377 aa13.95□□□□□ -0.18
HMBOX1-208ENST00000521516 KCNH8Q96L42 1107 aa13.92□□□□□ -0.18
HMBOX1-208ENST00000521516 ARID4BQ4LE39 1312 aaPredicted RBP13.92□□□□□ -0.18
HMBOX1-208ENST00000521516 UGGT2Q9NYU1 1516 aa13.91□□□□□ -0.18
HMBOX1-208ENST00000521516 KIF27Q86VH2 1401 aa13.91□□□□□ -0.18
HMBOX1-208ENST00000521516 CARMIL1Q5VZK9 1371 aa13.91□□□□□ -0.18
HMBOX1-208ENST00000521516 RAPGEF3O95398 923 aa13.9□□□□□ -0.18
HMBOX1-208ENST00000521516 YEATS2Q9ULM3 1422 aa13.89□□□□□ -0.19
HMBOX1-208ENST00000521516 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
HMBOX1-208ENST00000521516 KIAA0556O60303 1618 aa13.88□□□□□ -0.19
HMBOX1-208ENST00000521516 FRMPD1Q5SYB0 1578 aa13.88□□□□□ -0.19
HMBOX1-208ENST00000521516 IQSEC2Q5JU85 1478 aa13.87□□□□□ -0.19
HMBOX1-208ENST00000521516 ARHGEF40Q8TER5 1519 aa13.86□□□□□ -0.19
HMBOX1-208ENST00000521516 NEO1Q92859 1461 aa13.85□□□□□ -0.19
HMBOX1-208ENST00000521516 STRCQ7RTU9 1775 aa13.85□□□□□ -0.19
HMBOX1-208ENST00000521516 ABCA8O94911 1581 aa13.83□□□□□ -0.2
HMBOX1-208ENST00000521516 LTBP4Q8N2S1 1624 aa13.82□□□□□ -0.2
HMBOX1-208ENST00000521516 POGZQ7Z3K3 1410 aa13.82□□□□□ -0.2
HMBOX1-208ENST00000521516 ABCA9Q8IUA7 1624 aa13.82□□□□□ -0.2
HMBOX1-208ENST00000521516 TTC37Q6PGP7 1564 aa13.81□□□□□ -0.2
HMBOX1-208ENST00000521516 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
HMBOX1-208ENST00000521516 PTPRTO14522 1441 aa13.81□□□□□ -0.2
HMBOX1-208ENST00000521516 PREX1Q8TCU6 1659 aa13.8□□□□□ -0.2
HMBOX1-208ENST00000521516 FANCAO15360 1455 aa13.79□□□□□ -0.2
HMBOX1-208ENST00000521516 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
HMBOX1-208ENST00000521516 AKNAQ7Z591 1439 aa13.75□□□□□ -0.21
HMBOX1-208ENST00000521516 FER1L4A9Z1Z3 1794 aa13.74□□□□□ -0.21
HMBOX1-208ENST00000521516 FHOD3Q2V2M9 1422 aa13.74□□□□□ -0.21
HMBOX1-208ENST00000521516 RICTORQ6R327 1708 aa13.73□□□□□ -0.21
HMBOX1-208ENST00000521516 DENND4BO75064 1496 aaPredicted RBP13.72□□□□□ -0.21
HMBOX1-208ENST00000521516 MED1Q15648 1581 aaPredicted RBP13.72□□□□□ -0.21
HMBOX1-208ENST00000521516 ZMYM4Q5VZL5 1548 aa13.71□□□□□ -0.21
HMBOX1-208ENST00000521516 ARHGEF12Q9NZN5 1544 aa13.71□□□□□ -0.21
HMBOX1-208ENST00000521516 ATP10BO94823 1461 aa13.71□□□□□ -0.21
HMBOX1-208ENST00000521516 GOLGA3Q08378 1498 aa13.7□□□□□ -0.22
HMBOX1-208ENST00000521516 UHRF1BP1Q6BDS2 1440 aa13.69□□□□□ -0.22
HMBOX1-208ENST00000521516 ZFYVE16Q7Z3T8 1539 aa13.68□□□□□ -0.22
HMBOX1-208ENST00000521516 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
HMBOX1-208ENST00000521516 EFCAB5A4FU69 1503 aa13.68□□□□□ -0.22
HMBOX1-208ENST00000521516 MAGI2Q86UL8 1455 aa13.68□□□□□ -0.22
HMBOX1-208ENST00000521516 MLECQ14165 292 aa13.67□□□□□ -0.22
HMBOX1-208ENST00000521516 UBAP1LF5GYI3 381 aa13.66□□□□□ -0.22
HMBOX1-208ENST00000521516 CEBPAP49715 358 aaPredicted RBP13.66□□□□□ -0.22
HMBOX1-208ENST00000521516 SETD1BQ9UPS6 1966 aaKnown RBP13.65□□□□□ -0.22
HMBOX1-208ENST00000521516 NCOA1Q15788 1441 aa13.62□□□□□ -0.23
HMBOX1-208ENST00000521516 ARID3CA6NKF2 412 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms