RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
TRIM35-204ENST00000521283 GAPVD1Q14C86 1478 aa17.72■□□□□ 0.43
TRIM35-204ENST00000521283 DSG3P32926 999 aa17.71■□□□□ 0.43
TRIM35-204ENST00000521283 CHD1O14646 1710 aa17.7■□□□□ 0.42
TRIM35-204ENST00000521283 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
TRIM35-204ENST00000521283 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
TRIM35-204ENST00000521283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
TRIM35-204ENST00000521283 FBLN2P98095 1184 aa17.68■□□□□ 0.42
TRIM35-204ENST00000521283 HNRNPUL2Q1KMD3 747 aaKnown RBP17.68■□□□□ 0.42
TRIM35-204ENST00000521283 SNAPC4Q5SXM2 1469 aa17.68■□□□□ 0.42
TRIM35-204ENST00000521283 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
TRIM35-204ENST00000521283 CHMP7Q8WUX9 453 aaPredicted RBP17.67■□□□□ 0.42
TRIM35-204ENST00000521283 SYNJ2O15056 1496 aa17.66■□□□□ 0.42
TRIM35-204ENST00000521283 MYCNP04198 464 aaPredicted RBP17.61■□□□□ 0.41
TRIM35-204ENST00000521283 APLP2Q06481 763 aa17.61■□□□□ 0.41
TRIM35-204ENST00000521283 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
TRIM35-204ENST00000521283 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
TRIM35-204ENST00000521283 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
TRIM35-204ENST00000521283 RIMBP3CA6NJZ7 1639 aa17.56■□□□□ 0.4
TRIM35-204ENST00000521283 RIMBP3BA6NNM3 1639 aa17.56■□□□□ 0.4
TRIM35-204ENST00000521283 RIMBP3Q9UFD9 1639 aa17.56■□□□□ 0.4
TRIM35-204ENST00000521283 ARHGEF11O15085 1522 aa17.56■□□□□ 0.4
TRIM35-204ENST00000521283 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
TRIM35-204ENST00000521283 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
TRIM35-204ENST00000521283 ZNF219Q9P2Y4 722 aaPredicted RBP17.53■□□□□ 0.4
TRIM35-204ENST00000521283 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
TRIM35-204ENST00000521283 ADAMTS12P58397 1594 aa17.51■□□□□ 0.39
TRIM35-204ENST00000521283 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
TRIM35-204ENST00000521283 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
TRIM35-204ENST00000521283 KIF27Q86VH2 1401 aa17.49■□□□□ 0.39
TRIM35-204ENST00000521283 ZBTB22O15209 634 aa17.44■□□□□ 0.38
TRIM35-204ENST00000521283 ABCB7O75027 752 aa17.44■□□□□ 0.38
TRIM35-204ENST00000521283 NUP160Q12769 1436 aa17.43■□□□□ 0.38
TRIM35-204ENST00000521283 CUL7Q14999 1698 aa17.42■□□□□ 0.38
TRIM35-204ENST00000521283 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
TRIM35-204ENST00000521283 IGF1RP08069 1367 aa17.39■□□□□ 0.37
TRIM35-204ENST00000521283 CEP170Q5SW79 1584 aa17.37■□□□□ 0.37
TRIM35-204ENST00000521283 ARAP1Q96P48 1450 aa17.37■□□□□ 0.37
TRIM35-204ENST00000521283 SHROOM2Q13796 1616 aa17.32■□□□□ 0.36
TRIM35-204ENST00000521283 CARMIL1Q5VZK9 1371 aa17.29■□□□□ 0.36
TRIM35-204ENST00000521283 JPH4Q96JJ6 628 aa17.28■□□□□ 0.36
TRIM35-204ENST00000521283 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
TRIM35-204ENST00000521283 KIAA0586Q9BVV6 1533 aa17.26■□□□□ 0.35
TRIM35-204ENST00000521283 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
TRIM35-204ENST00000521283 PRG4Q92954 1404 aaPredicted RBP17.21■□□□□ 0.35
TRIM35-204ENST00000521283 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
TRIM35-204ENST00000521283 POLA2Q14181 598 aa17.18■□□□□ 0.34
TRIM35-204ENST00000521283 ERCC6L2Q5T890 1561 aa17.16■□□□□ 0.34
TRIM35-204ENST00000521283 CARMIL2Q6F5E8 1435 aa17.13■□□□□ 0.33
TRIM35-204ENST00000521283 EEA1Q15075 1411 aa17.13■□□□□ 0.33
TRIM35-204ENST00000521283 IQGAP2Q13576 1575 aa17.12■□□□□ 0.33
TRIM35-204ENST00000521283 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
TRIM35-204ENST00000521283 NPM1P06748 294 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRIM35-204ENST00000521283 TNIKQ9UKE5 1360 aa17.04■□□□□ 0.32
TRIM35-204ENST00000521283 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
TRIM35-204ENST00000521283 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
TRIM35-204ENST00000521283 UGGT2Q9NYU1 1516 aa17.03■□□□□ 0.32
TRIM35-204ENST00000521283 PTPRGP23470 1445 aa17.03■□□□□ 0.32
TRIM35-204ENST00000521283 GOLGA3Q08378 1498 aa16.99■□□□□ 0.31
TRIM35-204ENST00000521283 FAM9AQ8IZU1 332 aaPredicted RBP16.99■□□□□ 0.31
TRIM35-204ENST00000521283 ATXN8OSP0DMR3 200 aa16.98■□□□□ 0.31
TRIM35-204ENST00000521283 DISP1Q96F81 1524 aa16.96■□□□□ 0.31
TRIM35-204ENST00000521283 MAPKBP1O60336 1514 aa16.96■□□□□ 0.3
TRIM35-204ENST00000521283 ADCY10Q96PN6 1610 aa16.95■□□□□ 0.3
TRIM35-204ENST00000521283 KIAA0556O60303 1618 aa16.94■□□□□ 0.3
TRIM35-204ENST00000521283 UHRF1BP1LA0JNW5 1464 aa16.93■□□□□ 0.3
TRIM35-204ENST00000521283 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
TRIM35-204ENST00000521283 ABCC2Q92887 1545 aa16.9■□□□□ 0.3
TRIM35-204ENST00000521283 ABCC10Q5T3U5 1492 aa16.87■□□□□ 0.29
TRIM35-204ENST00000521283 KIF21BO75037 1637 aa16.87■□□□□ 0.29
TRIM35-204ENST00000521283 KIF13AQ9H1H9 1805 aa16.86■□□□□ 0.29
TRIM35-204ENST00000521283 TTBK1Q5TCY1 1321 aaPredicted RBP16.85■□□□□ 0.29
TRIM35-204ENST00000521283 PLB1Q6P1J6 1458 aa16.84■□□□□ 0.29
TRIM35-204ENST00000521283 KDM5BQ9UGL1 1544 aa16.83■□□□□ 0.28
TRIM35-204ENST00000521283 FAM69CQ0P6D2 419 aa16.82■□□□□ 0.28
TRIM35-204ENST00000521283 DIP2BQ9P265 1576 aa16.81■□□□□ 0.28
TRIM35-204ENST00000521283 RBM42Q9BTD8 480 aaKnown RBP16.8■□□□□ 0.28
TRIM35-204ENST00000521283 SAMD9Q5K651 1589 aa16.79■□□□□ 0.28
TRIM35-204ENST00000521283 ASXL2Q76L83 1435 aa16.77■□□□□ 0.27
TRIM35-204ENST00000521283 ABCA8O94911 1581 aa16.77■□□□□ 0.27
TRIM35-204ENST00000521283 ZBTB12Q9Y330 459 aaPredicted RBP16.76■□□□□ 0.27
TRIM35-204ENST00000521283 GLI2P10070 1586 aa16.76■□□□□ 0.27
TRIM35-204ENST00000521283 ZCCHC11Q5TAX3 1644 aaKnown RBP16.75■□□□□ 0.27
TRIM35-204ENST00000521283 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
TRIM35-204ENST00000521283 UBTFP17480 764 aaKnown RBP16.72■□□□□ 0.27
TRIM35-204ENST00000521283 WDR7Q9Y4E6 1490 aa16.68■□□□□ 0.26
TRIM35-204ENST00000521283 P3H3Q8IVL6 736 aa16.68■□□□□ 0.26
TRIM35-204ENST00000521283 EPRSP07814 1512 aaKnown RBP16.68■□□□□ 0.26
TRIM35-204ENST00000521283 RAPGEF6Q8TEU7 1601 aa16.67■□□□□ 0.26
TRIM35-204ENST00000521283 TSPOAP1O95153 1857 aa16.65■□□□□ 0.26
TRIM35-204ENST00000521283 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
TRIM35-204ENST00000521283 TEX14Q8IWB6 1497 aa16.65■□□□□ 0.26
TRIM35-204ENST00000521283 MAP3K4Q9Y6R4 1608 aa16.63■□□□□ 0.25
TRIM35-204ENST00000521283 ATP10BO94823 1461 aa16.62■□□□□ 0.25
TRIM35-204ENST00000521283 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
TRIM35-204ENST00000521283 CFAP43Q8NDM7 1665 aa16.61■□□□□ 0.25
TRIM35-204ENST00000521283 FHOD3Q2V2M9 1422 aa16.61■□□□□ 0.25
TRIM35-204ENST00000521283 FMN1Q68DA7 1419 aa16.61■□□□□ 0.25
TRIM35-204ENST00000521283 KDM6BO15054 1643 aa16.6■□□□□ 0.25
TRIM35-204ENST00000521283 POTEHQ6S545 545 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms