RNA–Protein interactions for RNA: ENST00000520475.5

PTK2-222, Transcript of protein tyrosine kinase 2, human

TSL 5

Gene PTK2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-222	ENST00000520475	TDRD9	Q8NDG6	1382 aa	Known RBP	12.59	□□□□□ -0.39
PTK2-222	ENST00000520475	WDR97	A6NE52	1622 aa		12.58	□□□□□ -0.4
PTK2-222	ENST00000520475	CHMP7	Q8WUX9	453 aa	Predicted RBP	12.57	□□□□□ -0.4
PTK2-222	ENST00000520475	ABCA10	Q8WWZ4	1543 aa		12.57	□□□□□ -0.4
PTK2-222	ENST00000520475	SNAPC4	Q5SXM2	1469 aa		12.54	□□□□□ -0.4
PTK2-222	ENST00000520475	MAGI1	Q96QZ7	1491 aa	Predicted RBP	12.54	□□□□□ -0.4
PTK2-222	ENST00000520475	GAPVD1	Q14C86	1478 aa		12.53	□□□□□ -0.4
PTK2-222	ENST00000520475	C1QBP	Q07021	282 aa	Known RBP	12.52	□□□□□ -0.41
PTK2-222	ENST00000520475	SYNJ2	O15056	1496 aa		12.49	□□□□□ -0.41
PTK2-222	ENST00000520475	GRIN2B	Q13224	1484 aa		12.48	□□□□□ -0.41
PTK2-222	ENST00000520475	KIF27	Q86VH2	1401 aa		12.48	□□□□□ -0.41
PTK2-222	ENST00000520475	IGF1R	P08069	1367 aa		12.47	□□□□□ -0.41
PTK2-222	ENST00000520475	KIF13A	Q9H1H9	1805 aa		12.47	□□□□□ -0.41
PTK2-222	ENST00000520475	KCNA4	P22459	653 aa		12.47	□□□□□ -0.41
PTK2-222	ENST00000520475	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.47	□□□□□ -0.41	8e-7	■■□□□ 14
PTK2-222	ENST00000520475	PBRM1	Q86U86	1689 aa		12.45	□□□□□ -0.42
PTK2-222	ENST00000520475	ABCA5	Q8WWZ7	1642 aa		12.42	□□□□□ -0.42
PTK2-222	ENST00000520475	ILDR1	Q86SU0	546 aa	Predicted RBP	12.42	□□□□□ -0.42
PTK2-222	ENST00000520475	ERICH3	Q5RHP9	1530 aa		12.41	□□□□□ -0.42
PTK2-222	ENST00000520475	CSRNP3	Q8WYN3	585 aa		12.4	□□□□□ -0.42
PTK2-222	ENST00000520475	RUSC2	Q8N2Y8	1516 aa		12.39	□□□□□ -0.43
PTK2-222	ENST00000520475	FHAD1	B1AJZ9	1412 aa		12.38	□□□□□ -0.43
PTK2-222	ENST00000520475	CARMIL1	Q5VZK9	1371 aa		12.38	□□□□□ -0.43
PTK2-222	ENST00000520475	ERCC6L2	Q5T890	1561 aa		12.36	□□□□□ -0.43
PTK2-222	ENST00000520475	EEA1	Q15075	1411 aa		12.36	□□□□□ -0.43
PTK2-222	ENST00000520475	CEP170	Q5SW79	1584 aa		12.34	□□□□□ -0.43
PTK2-222	ENST00000520475	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.33	□□□□□ -0.44
PTK2-222	ENST00000520475	SHROOM2	Q13796	1616 aa		12.32	□□□□□ -0.44
PTK2-222	ENST00000520475	GRIN2A	Q12879	1464 aa		12.31	□□□□□ -0.44
PTK2-222	ENST00000520475	KDM4F	A0A1W2PPD8	638 aa		12.3	□□□□□ -0.44
PTK2-222	ENST00000520475	RAPGEF2	Q9Y4G8	1499 aa		12.28	□□□□□ -0.44
PTK2-222	ENST00000520475	PRX	Q9BXM0	1461 aa		12.27	□□□□□ -0.44
PTK2-222	ENST00000520475	ADAMTS12	P58397	1594 aa		12.27	□□□□□ -0.44
PTK2-222	ENST00000520475	KDM6B	O15054	1643 aa		12.27	□□□□□ -0.44
PTK2-222	ENST00000520475	CUL7	Q14999	1698 aa		12.27	□□□□□ -0.45
PTK2-222	ENST00000520475	FAM69C	Q0P6D2	419 aa		12.27	□□□□□ -0.45
PTK2-222	ENST00000520475	NUP160	Q12769	1436 aa		12.27	□□□□□ -0.45
PTK2-222	ENST00000520475	ABCC10	Q5T3U5	1492 aa		12.27	□□□□□ -0.45
PTK2-222	ENST00000520475	TSPOAP1	O95153	1857 aa		12.26	□□□□□ -0.45
PTK2-222	ENST00000520475	NPM1	P06748	294 aa	Known RBP eCLIP	12.25	□□□□□ -0.45
PTK2-222	ENST00000520475	JPH4	Q96JJ6	628 aa		12.24	□□□□□ -0.45
PTK2-222	ENST00000520475	MAPKBP1	O60336	1514 aa		12.23	□□□□□ -0.45
PTK2-222	ENST00000520475	DIP2B	Q9P265	1576 aa		12.22	□□□□□ -0.45
PTK2-222	ENST00000520475	KIAA0586	Q9BVV6	1533 aa		12.21	□□□□□ -0.46
PTK2-222	ENST00000520475	PRG4	Q92954	1404 aa	Predicted RBP	12.2	□□□□□ -0.46
PTK2-222	ENST00000520475		U3KPZ7	1027 aa	Predicted RBP	12.19	□□□□□ -0.46
PTK2-222	ENST00000520475	UBTF	P17480	764 aa	Known RBP	12.17	□□□□□ -0.46
PTK2-222	ENST00000520475	ADCY10	Q96PN6	1610 aa		12.15	□□□□□ -0.47
PTK2-222	ENST00000520475	KIF21B	O75037	1637 aa		12.12	□□□□□ -0.47
PTK2-222	ENST00000520475	EHMT2	Q96KQ7	1210 aa		12.12	□□□□□ -0.47
PTK2-222	ENST00000520475	HECW2	Q9P2P5	1572 aa		12.11	□□□□□ -0.47
PTK2-222	ENST00000520475	ADGRL1	O94910	1474 aa		12.11	□□□□□ -0.47
PTK2-222	ENST00000520475	GOLGA3	Q08378	1498 aa		12.1	□□□□□ -0.47
PTK2-222	ENST00000520475	LOC105371045	A0A1W2PR82	267 aa		12.1	□□□□□ -0.47
PTK2-222	ENST00000520475	SLC4A2	P04920	1241 aa		12.09	□□□□□ -0.47
PTK2-222	ENST00000520475	CARMIL2	Q6F5E8	1435 aa		12.09	□□□□□ -0.47
PTK2-222	ENST00000520475	IQGAP2	Q13576	1575 aa		12.08	□□□□□ -0.48
PTK2-222	ENST00000520475	UGGT2	Q9NYU1	1516 aa		12.06	□□□□□ -0.48
PTK2-222	ENST00000520475	TNIK	Q9UKE5	1360 aa		12.05	□□□□□ -0.48
PTK2-222	ENST00000520475	RANGAP1	P46060	587 aa	Predicted RBP	12.04	□□□□□ -0.48
PTK2-222	ENST00000520475	PPRC1	Q5VV67	1664 aa	Known RBP	12.03	□□□□□ -0.48
PTK2-222	ENST00000520475	FBXO41	Q8TF61	875 aa		12.03	□□□□□ -0.48
PTK2-222	ENST00000520475	PTPRG	P23470	1445 aa		12.03	□□□□□ -0.48
PTK2-222	ENST00000520475	DISP1	Q96F81	1524 aa		12.02	□□□□□ -0.48
PTK2-222	ENST00000520475	P3H3	Q8IVL6	736 aa		12.02	□□□□□ -0.49
PTK2-222	ENST00000520475	GLI2	P10070	1586 aa		12.01	□□□□□ -0.49
PTK2-222	ENST00000520475	CTTNBP2	Q8WZ74	1663 aa		12.01	□□□□□ -0.49
PTK2-222	ENST00000520475	CAPN15	O75808	1086 aa		12.01	□□□□□ -0.49
PTK2-222	ENST00000520475	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.01	□□□□□ -0.49
PTK2-222	ENST00000520475	PLB1	Q6P1J6	1458 aa		11.99	□□□□□ -0.49
PTK2-222	ENST00000520475	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.98	□□□□□ -0.49
PTK2-222	ENST00000520475	ABCC2	Q92887	1545 aa		11.96	□□□□□ -0.49
PTK2-222	ENST00000520475	ASXL2	Q76L83	1435 aa		11.95	□□□□□ -0.5
PTK2-222	ENST00000520475	TEX14	Q8IWB6	1497 aa		11.95	□□□□□ -0.5
PTK2-222	ENST00000520475	MAP3K4	Q9Y6R4	1608 aa		11.94	□□□□□ -0.5
PTK2-222	ENST00000520475	KIAA0556	O60303	1618 aa		11.93	□□□□□ -0.5
PTK2-222	ENST00000520475	EFCAB5	A4FU69	1503 aa		11.93	□□□□□ -0.5
PTK2-222	ENST00000520475	UACA	Q9BZF9	1416 aa		11.93	□□□□□ -0.5
PTK2-222	ENST00000520475	ARHGAP35	Q9NRY4	1499 aa		11.92	□□□□□ -0.5
PTK2-222	ENST00000520475	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.92	□□□□□ -0.5
PTK2-222	ENST00000520475	CLIP1	P30622	1438 aa		11.92	□□□□□ -0.5
PTK2-222	ENST00000520475	SAMD9	Q5K651	1589 aa		11.92	□□□□□ -0.5
PTK2-222	ENST00000520475	DSG3	P32926	999 aa		11.91	□□□□□ -0.5
PTK2-222	ENST00000520475	UHRF1BP1L	A0JNW5	1464 aa		11.89	□□□□□ -0.51
PTK2-222	ENST00000520475	FHOD3	Q2V2M9	1422 aa		11.89	□□□□□ -0.51
PTK2-222	ENST00000520475	CEP162	Q5TB80	1403 aa		11.89	□□□□□ -0.51
PTK2-222	ENST00000520475	EPRS	P07814	1512 aa	Known RBP	11.88	□□□□□ -0.51
PTK2-222	ENST00000520475	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.88	□□□□□ -0.51
PTK2-222	ENST00000520475	APLP2	Q06481	763 aa		11.88	□□□□□ -0.51
PTK2-222	ENST00000520475	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.88	□□□□□ -0.51
PTK2-222	ENST00000520475	FMN1	Q68DA7	1419 aa		11.87	□□□□□ -0.51
PTK2-222	ENST00000520475	LMTK3	Q96Q04	1460 aa		11.85	□□□□□ -0.51
PTK2-222	ENST00000520475	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.85	□□□□□ -0.51
PTK2-222	ENST00000520475	ABCA8	O94911	1581 aa		11.84	□□□□□ -0.51
PTK2-222	ENST00000520475	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.83	□□□□□ -0.52
PTK2-222	ENST00000520475	KDM5B	Q9UGL1	1544 aa		11.83	□□□□□ -0.52
PTK2-222	ENST00000520475	CFAP43	Q8NDM7	1665 aa		11.81	□□□□□ -0.52
PTK2-222	ENST00000520475	PLEKHD1	A6NEE1	506 aa		11.81	□□□□□ -0.52
PTK2-222	ENST00000520475	ATP10B	O94823	1461 aa		11.81	□□□□□ -0.52
PTK2-222	ENST00000520475	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.8	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms