RNA–Protein interactions for RNA: ENST00000519811.5

DENND3-211, Transcript of DENN domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DENND3, Length 5,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-211ENST00000519811 DEKP35659 375 aaKnown RBP18.57■□□□□ 0.56
DENND3-211ENST00000519811 DCAF1Q9Y4B6 1507 aa18.57■□□□□ 0.56
DENND3-211ENST00000519811 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
DENND3-211ENST00000519811 TRIM44Q96DX7 344 aaPredicted RBP18.54■□□□□ 0.56
DENND3-211ENST00000519811 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.53■□□□□ 0.56
DENND3-211ENST00000519811 CHIC2Q9UKJ5 165 aa18.52■□□□□ 0.56
DENND3-211ENST00000519811 NCLP19338 710 aaKnown RBP18.52■□□□□ 0.55
DENND3-211ENST00000519811 CLIP1P30622 1438 aa18.5■□□□□ 0.55
DENND3-211ENST00000519811 C14orf37Q86TY3 774 aa18.49■□□□□ 0.55
DENND3-211ENST00000519811 PDS5BQ9NTI5 1447 aa18.48■□□□□ 0.55
DENND3-211ENST00000519811 HSP90AA1P07900 732 aaKnown RBP18.46■□□□□ 0.55
DENND3-211ENST00000519811 AMER1Q5JTC6 1135 aaPredicted RBP18.46■□□□□ 0.55
DENND3-211ENST00000519811 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
DENND3-211ENST00000519811 PRKCSHP14314 528 aaPredicted RBP18.45■□□□□ 0.54
DENND3-211ENST00000519811 TRHP20396 242 aaPredicted RBP18.44■□□□□ 0.54
DENND3-211ENST00000519811 UPF2Q9HAU5 1272 aaKnown RBP18.44■□□□□ 0.54
DENND3-211ENST00000519811 CFDP1Q9UEE9 299 aaPredicted RBP18.44■□□□□ 0.54
DENND3-211ENST00000519811 DDRGK1Q96HY6 314 aa18.4■□□□□ 0.54
DENND3-211ENST00000519811 CCDC136Q96JN2 1154 aa18.4■□□□□ 0.54
DENND3-211ENST00000519811 PPM1GO15355 546 aaPredicted RBP18.38■□□□□ 0.53
DENND3-211ENST00000519811 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
DENND3-211ENST00000519811 NOP58Q9Y2X3 529 aaKnown RBP18.37■□□□□ 0.53
DENND3-211ENST00000519811 HDGFP51858 240 aaKnown RBP18.36■□□□□ 0.53
DENND3-211ENST00000519811 SMARCA2P51531 1590 aa18.36■□□□□ 0.53
DENND3-211ENST00000519811 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
DENND3-211ENST00000519811 CDCA8Q53HL2 280 aa18.33■□□□□ 0.53
DENND3-211ENST00000519811 HNRNPUQ00839 825 aaKnown RBP eCLIP18.33■□□□□ 0.52
DENND3-211ENST00000519811 KDM2AQ9Y2K7 1162 aa18.32■□□□□ 0.52
DENND3-211ENST00000519811 CARMIL2Q6F5E8 1435 aa18.31■□□□□ 0.52
DENND3-211ENST00000519811 WDR43Q15061 677 aaKnown RBP eCLIP18.3■□□□□ 0.52
DENND3-211ENST00000519811 MIER1Q8N108 512 aa18.29■□□□□ 0.52
DENND3-211ENST00000519811 FHAD1B1AJZ9 1412 aa18.27■□□□□ 0.52
DENND3-211ENST00000519811 KANK1Q14678 1352 aa18.26■□□□□ 0.51
DENND3-211ENST00000519811 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.26■□□□□ 0.51
DENND3-211ENST00000519811 A0A0G2JS52 829 aa18.26■□□□□ 0.51
DENND3-211ENST00000519811 RRP7BPQ9NSQ0 103 aa18.25■□□□□ 0.51
DENND3-211ENST00000519811 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
DENND3-211ENST00000519811 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
DENND3-211ENST00000519811 LAS1LQ9Y4W2 734 aaKnown RBP18.24■□□□□ 0.51
DENND3-211ENST00000519811 CARMIL1Q5VZK9 1371 aa18.23■□□□□ 0.51
DENND3-211ENST00000519811 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
DENND3-211ENST00000519811 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
DENND3-211ENST00000519811 VSIG10Q8N0Z9 540 aa18.22■□□□□ 0.51
DENND3-211ENST00000519811 DNTTIP2Q5QJE6 756 aaKnown RBP18.22■□□□□ 0.51
DENND3-211ENST00000519811 CUX2O14529 1486 aa18.22■□□□□ 0.51
DENND3-211ENST00000519811 BECN1Q14457 450 aa18.19■□□□□ 0.5
DENND3-211ENST00000519811 TNIKQ9UKE5 1360 aa18.19■□□□□ 0.5
DENND3-211ENST00000519811 ZBTB7CA1YPR0 619 aa18.19■□□□□ 0.5
DENND3-211ENST00000519811 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
DENND3-211ENST00000519811 EIF4G2P78344 907 aaKnown RBP eCLIP18.18■□□□□ 0.5
DENND3-211ENST00000519811 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
DENND3-211ENST00000519811 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
DENND3-211ENST00000519811 PODXL2Q9NZ53 605 aa18.18■□□□□ 0.5
DENND3-211ENST00000519811 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
DENND3-211ENST00000519811 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
DENND3-211ENST00000519811 PKNOX2Q96KN3 472 aa18.15■□□□□ 0.5
DENND3-211ENST00000519811 PTMAP06454 111 aaKnown RBP18.14■□□□□ 0.5
DENND3-211ENST00000519811 POGKQ9P215 609 aa18.14■□□□□ 0.49
DENND3-211ENST00000519811 RBM19Q9Y4C8 960 aaKnown RBP18.13■□□□□ 0.49
DENND3-211ENST00000519811 SOGA1O94964 1423 aa18.12■□□□□ 0.49
DENND3-211ENST00000519811 RGL3Q3MIN7 710 aa18.11■□□□□ 0.49
DENND3-211ENST00000519811 MYH16Q9H6N6 1097 aa18.1■□□□□ 0.49
DENND3-211ENST00000519811 RSPH6AQ9H0K4 717 aa18.1■□□□□ 0.49
DENND3-211ENST00000519811 L1TD1Q5T7N2 865 aaKnown RBP18.09■□□□□ 0.49
DENND3-211ENST00000519811 HSP90AA2PQ14568 343 aaPredicted RBP18.09■□□□□ 0.49
DENND3-211ENST00000519811 FAM9BQ8IZU0 186 aa18.08■□□□□ 0.48
DENND3-211ENST00000519811 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
DENND3-211ENST00000519811 GOLGA6L22H0YM25 854 aa18.07■□□□□ 0.48
DENND3-211ENST00000519811 EFCAB2Q5VUJ9 269 aa18.07■□□□□ 0.48
DENND3-211ENST00000519811 DDX10Q13206 875 aaKnown RBP18.06■□□□□ 0.48
DENND3-211ENST00000519811 PNNQ9H307 717 aaKnown RBP18.04■□□□□ 0.48
DENND3-211ENST00000519811 A0A0U1RQG5 324 aaPredicted RBP18.04■□□□□ 0.48
DENND3-211ENST00000519811 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
DENND3-211ENST00000519811 TNNT3P45378 269 aaPredicted RBP18.03■□□□□ 0.48
DENND3-211ENST00000519811 MLECQ14165 292 aa18.02■□□□□ 0.48
DENND3-211ENST00000519811 LMOD2Q6P5Q4 547 aa18.02■□□□□ 0.48
DENND3-211ENST00000519811 NUDCQ9Y266 331 aa18.02■□□□□ 0.48
DENND3-211ENST00000519811 PLEKHG5O94827 1062 aa18.02■□□□□ 0.47
DENND3-211ENST00000519811 MRS2Q9HD23 443 aa18.01■□□□□ 0.47
DENND3-211ENST00000519811 TSHZ2Q9NRE2 1034 aa18■□□□□ 0.47
DENND3-211ENST00000519811 MSNP26038 577 aaKnown RBP17.99■□□□□ 0.47
DENND3-211ENST00000519811 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
DENND3-211ENST00000519811 ABCC8Q09428 1581 aa17.98■□□□□ 0.47
DENND3-211ENST00000519811 FMN1Q68DA7 1419 aa17.97■□□□□ 0.47
DENND3-211ENST00000519811 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
DENND3-211ENST00000519811 TDRD9Q8NDG6 1382 aaKnown RBP17.96■□□□□ 0.47
DENND3-211ENST00000519811 ARID3AQ99856 593 aa17.95■□□□□ 0.46
DENND3-211ENST00000519811 CCDC88BA6NC98 1476 aa17.94■□□□□ 0.46
DENND3-211ENST00000519811 RSPH4AQ5TD94 716 aa17.94■□□□□ 0.46
DENND3-211ENST00000519811 PPP4R2Q9NY27 417 aa17.94■□□□□ 0.46
DENND3-211ENST00000519811 MAPK8IP3Q9UPT6 1336 aa17.92■□□□□ 0.46
DENND3-211ENST00000519811 GGT6Q6P531 493 aa17.92■□□□□ 0.46
DENND3-211ENST00000519811 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
DENND3-211ENST00000519811 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
DENND3-211ENST00000519811 CHAF1AQ13111 956 aaPredicted RBP17.9■□□□□ 0.46
DENND3-211ENST00000519811 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
DENND3-211ENST00000519811 NPHP1O15259 732 aa17.88■□□□□ 0.45
DENND3-211ENST00000519811 TOP2AP11388 1531 aaKnown RBP17.87■□□□□ 0.45
DENND3-211ENST00000519811 ANO8Q9HCE9 1232 aaPredicted RBP17.87■□□□□ 0.45
DENND3-211ENST00000519811 EID1Q9Y6B2 187 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms