RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 TRIM41Q8WV44 630 aa12.47□□□□□ -0.41
CTNNA1-202ENST00000517533 GSE1Q14687 1217 aa12.46□□□□□ -0.41
CTNNA1-202ENST00000517533 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
CTNNA1-202ENST00000517533 TSHZ2Q9NRE2 1034 aa12.45□□□□□ -0.42
CTNNA1-202ENST00000517533 DCAF8Q5TAQ9 597 aa12.44□□□□□ -0.42
CTNNA1-202ENST00000517533 HS6ST3Q8IZP7 471 aa12.43□□□□□ -0.42
CTNNA1-202ENST00000517533 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
CTNNA1-202ENST00000517533 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
CTNNA1-202ENST00000517533 RIOK3O14730 519 aaKnown RBP12.35□□□□□ -0.43
CTNNA1-202ENST00000517533 FAM212AQ96EL1 285 aa12.35□□□□□ -0.43
CTNNA1-202ENST00000517533 DNAJC5Q9H3Z4 198 aa12.34□□□□□ -0.43
CTNNA1-202ENST00000517533 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
CTNNA1-202ENST00000517533 CHRM1P11229 460 aaPredicted RBP12.3□□□□□ -0.44
CTNNA1-202ENST00000517533 BCANQ96GW7 911 aa12.29□□□□□ -0.44
CTNNA1-202ENST00000517533 PYGBP11216 843 aa12.28□□□□□ -0.44
CTNNA1-202ENST00000517533 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-202ENST00000517533 PRKCSHP14314 528 aaPredicted RBP12.25□□□□□ -0.45
CTNNA1-202ENST00000517533 VGFO15240 615 aaPredicted RBP12.24□□□□□ -0.45
CTNNA1-202ENST00000517533 STK25O00506 426 aa12.23□□□□□ -0.45
CTNNA1-202ENST00000517533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.22□□□□□ -0.45
CTNNA1-202ENST00000517533 ZFP91Q96JP5 570 aaPredicted RBP12.22□□□□□ -0.45
CTNNA1-202ENST00000517533 SGIP1Q9BQI5 828 aa12.2□□□□□ -0.46
CTNNA1-202ENST00000517533 BCL11BQ9C0K0 894 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-202ENST00000517533 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
CTNNA1-202ENST00000517533 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-202ENST00000517533 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-202ENST00000517533 STK24Q9Y6E0 443 aa12.15□□□□□ -0.46
CTNNA1-202ENST00000517533 PRKAR2AP13861 404 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-202ENST00000517533 FXR2P51116 673 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■■□□□ 12.9
CTNNA1-202ENST00000517533 PCDHB8Q9UN66 801 aa12.08□□□□□ -0.48
CTNNA1-202ENST00000517533 PCDHB13Q9Y5F0 798 aa12.08□□□□□ -0.48
CTNNA1-202ENST00000517533 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
CTNNA1-202ENST00000517533 TPRNQ4KMQ1 711 aa12.03□□□□□ -0.48
CTNNA1-202ENST00000517533 ZNF467Q7Z7K2 595 aaPredicted RBP12□□□□□ -0.49
CTNNA1-202ENST00000517533 PIP4P2Q8N4L2 257 aa12□□□□□ -0.49
CTNNA1-202ENST00000517533 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-202ENST00000517533 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
CTNNA1-202ENST00000517533 CADPS2Q86UW7 1296 aa11.96□□□□□ -0.49
CTNNA1-202ENST00000517533 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
CTNNA1-202ENST00000517533 PSEN1P49768 467 aa11.94□□□□□ -0.5
CTNNA1-202ENST00000517533 ZNF579Q8NAF0 562 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-202ENST00000517533 MAP3K13O43283 966 aa11.93□□□□□ -0.5
CTNNA1-202ENST00000517533 MFRPQ9BY79 579 aa11.93□□□□□ -0.5
CTNNA1-202ENST00000517533 KIF12Q96FN5 646 aa11.92□□□□□ -0.5
CTNNA1-202ENST00000517533 NBR1Q14596 966 aa11.88□□□□□ -0.51
CTNNA1-202ENST00000517533 RYDENQ9NUL5 291 aaKnown RBP11.88□□□□□ -0.51
CTNNA1-202ENST00000517533 PPP1R37O75864 691 aa11.86□□□□□ -0.51
CTNNA1-202ENST00000517533 EFCAB3Q8N7B9 438 aa11.84□□□□□ -0.51
CTNNA1-202ENST00000517533 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
CTNNA1-202ENST00000517533 PHF12Q96QT6 1004 aa11.83□□□□□ -0.52
CTNNA1-202ENST00000517533 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-202ENST00000517533 CABP2Q9NPB3 220 aa11.81□□□□□ -0.52
CTNNA1-202ENST00000517533 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
CTNNA1-202ENST00000517533 PHF8Q9UPP1 1060 aa11.8□□□□□ -0.52
CTNNA1-202ENST00000517533 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-202ENST00000517533 TRPC6Q9Y210 931 aa11.78□□□□□ -0.52
CTNNA1-202ENST00000517533 KCNV2Q8TDN2 545 aa11.77□□□□□ -0.53
CTNNA1-202ENST00000517533 MS4A4AQ96JQ5 239 aa11.74□□□□□ -0.53
CTNNA1-202ENST00000517533 SOX12O15370 315 aa11.71□□□□□ -0.53
CTNNA1-202ENST00000517533 NLRP6P59044 892 aa11.71□□□□□ -0.53
CTNNA1-202ENST00000517533 MS4A3Q96HJ5 214 aa11.69□□□□□ -0.54
CTNNA1-202ENST00000517533 C19orf67A6NJJ6 358 aa11.66□□□□□ -0.54
CTNNA1-202ENST00000517533 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
CTNNA1-202ENST00000517533 P3H3Q8IVL6 736 aa11.65□□□□□ -0.54
CTNNA1-202ENST00000517533 WDR70Q9NW82 654 aa11.65□□□□□ -0.54
CTNNA1-202ENST00000517533 TMEM106CQ9BVX2 250 aa11.64□□□□□ -0.55
CTNNA1-202ENST00000517533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.57□□□□□ -0.56
CTNNA1-202ENST00000517533 TTLL13PA6NNM8 815 aa11.55□□□□□ -0.56
CTNNA1-202ENST00000517533 E2F4Q16254 413 aa11.55□□□□□ -0.56
CTNNA1-202ENST00000517533 CRISPLD2Q9H0B8 497 aa11.54□□□□□ -0.56
CTNNA1-202ENST00000517533 EVX2Q03828 476 aa11.53□□□□□ -0.56
CTNNA1-202ENST00000517533 LMOD2Q6P5Q4 547 aa11.53□□□□□ -0.56
CTNNA1-202ENST00000517533 ILDR1Q86SU0 546 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-202ENST00000517533 LARP6Q9BRS8 491 aaKnown RBP11.53□□□□□ -0.56
CTNNA1-202ENST00000517533 BMP2KQ9NSY1 1161 aaPredicted RBP11.53□□□□□ -0.56
CTNNA1-202ENST00000517533 GALR2O43603 387 aaPredicted RBP11.52□□□□□ -0.57
CTNNA1-202ENST00000517533 MFSD10Q14728 455 aa11.52□□□□□ -0.57
CTNNA1-202ENST00000517533 ARHGEF1Q92888 912 aaKnown RBP11.52□□□□□ -0.57
CTNNA1-202ENST00000517533 TIE1P35590 1138 aa11.51□□□□□ -0.57
CTNNA1-202ENST00000517533 SEMA3EO15041 775 aa11.5□□□□□ -0.57
CTNNA1-202ENST00000517533 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
CTNNA1-202ENST00000517533 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-202ENST00000517533 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
CTNNA1-202ENST00000517533 PDE4AP27815 886 aa11.47□□□□□ -0.57
CTNNA1-202ENST00000517533 TESPA1A2RU30 521 aaPredicted RBP11.46□□□□□ -0.57
CTNNA1-202ENST00000517533 TRIM35Q9UPQ4 493 aa11.45□□□□□ -0.58
CTNNA1-202ENST00000517533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.44□□□□□ -0.584e-8■■□□□ 11.9
CTNNA1-202ENST00000517533 CAMK2BQ13554 666 aa11.43□□□□□ -0.58
CTNNA1-202ENST00000517533 DDX27Q96GQ7 796 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-202ENST00000517533 ATN1P54259 1190 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-202ENST00000517533 PDCD7Q8N8D1 485 aaKnown RBP11.39□□□□□ -0.59
CTNNA1-202ENST00000517533 ZC3H15Q8WU90 426 aaKnown RBP11.39□□□□□ -0.59
CTNNA1-202ENST00000517533 ARIH1Q9Y4X5 557 aaPredicted RBP11.39□□□□□ -0.59
CTNNA1-202ENST00000517533 HAX1O00165 279 aa11.37□□□□□ -0.59
CTNNA1-202ENST00000517533 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-202ENST00000517533 PPP1R15BQ5SWA1 713 aa11.35□□□□□ -0.59
CTNNA1-202ENST00000517533 MICALL2Q8IY33 904 aa11.35□□□□□ -0.59
CTNNA1-202ENST00000517533 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
CTNNA1-202ENST00000517533 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
CTNNA1-202ENST00000517533 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms