RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
PCDHGA6-201ENST00000517434 GOLGA3Q08378 1498 aa16.44■□□□□ 0.22
PCDHGA6-201ENST00000517434 CHIC2Q9UKJ5 165 aa16.44■□□□□ 0.22
PCDHGA6-201ENST00000517434 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
PCDHGA6-201ENST00000517434 CFDP1Q9UEE9 299 aaPredicted RBP16.42■□□□□ 0.22
PCDHGA6-201ENST00000517434 C14orf37Q86TY3 774 aa16.4■□□□□ 0.22
PCDHGA6-201ENST00000517434 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
PCDHGA6-201ENST00000517434 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
PCDHGA6-201ENST00000517434 UPF2Q9HAU5 1272 aaKnown RBP16.37■□□□□ 0.21
PCDHGA6-201ENST00000517434 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
PCDHGA6-201ENST00000517434 CARMIL2Q6F5E8 1435 aa16.35■□□□□ 0.21
PCDHGA6-201ENST00000517434 ERICH6BQ5W0A0 696 aa16.35■□□□□ 0.21
PCDHGA6-201ENST00000517434 CCDC136Q96JN2 1154 aa16.35■□□□□ 0.21
PCDHGA6-201ENST00000517434 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
PCDHGA6-201ENST00000517434 TNNT2P45379 298 aaPredicted RBP16.34■□□□□ 0.21
PCDHGA6-201ENST00000517434 HSP90AA1P07900 732 aaKnown RBP16.32■□□□□ 0.2
PCDHGA6-201ENST00000517434 FHAD1B1AJZ9 1412 aa16.3■□□□□ 0.2
PCDHGA6-201ENST00000517434 MIER1Q8N108 512 aa16.3■□□□□ 0.2
PCDHGA6-201ENST00000517434 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
PCDHGA6-201ENST00000517434 CDCA8Q53HL2 280 aa16.29■□□□□ 0.2
PCDHGA6-201ENST00000517434 HAP1P54257 671 aaPredicted RBP16.28■□□□□ 0.2
PCDHGA6-201ENST00000517434 CUX2O14529 1486 aa16.27■□□□□ 0.2
PCDHGA6-201ENST00000517434 KANK1Q14678 1352 aa16.24■□□□□ 0.19
PCDHGA6-201ENST00000517434 ARXQ96QS3 562 aa16.24■□□□□ 0.19
PCDHGA6-201ENST00000517434 KDM2AQ9Y2K7 1162 aa16.24■□□□□ 0.19
PCDHGA6-201ENST00000517434 CCNB3Q8WWL7 1395 aa16.23■□□□□ 0.19
PCDHGA6-201ENST00000517434 WIZO95785 1651 aa16.23■□□□□ 0.19
PCDHGA6-201ENST00000517434 DDRGK1Q96HY6 314 aa16.23■□□□□ 0.19
PCDHGA6-201ENST00000517434 TNIKQ9UKE5 1360 aa16.23■□□□□ 0.19
PCDHGA6-201ENST00000517434 TRIM44Q96DX7 344 aaPredicted RBP16.22■□□□□ 0.19
PCDHGA6-201ENST00000517434 PPM1GO15355 546 aaPredicted RBP16.22■□□□□ 0.19
PCDHGA6-201ENST00000517434 DDX10Q13206 875 aaKnown RBP16.22■□□□□ 0.19
PCDHGA6-201ENST00000517434 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
PCDHGA6-201ENST00000517434 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.19
PCDHGA6-201ENST00000517434 CADPSQ9ULU8 1353 aa16.21■□□□□ 0.19
PCDHGA6-201ENST00000517434 RTN4Q9NQC3 1192 aaKnown RBP16.21■□□□□ 0.18
PCDHGA6-201ENST00000517434 SOGA1O94964 1423 aa16.2■□□□□ 0.18
PCDHGA6-201ENST00000517434 CCDC88BA6NC98 1476 aa16.2■□□□□ 0.18
PCDHGA6-201ENST00000517434 WDR43Q15061 677 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCDHGA6-201ENST00000517434 EIF4G1Q04637 1599 aaKnown RBP16.17■□□□□ 0.18
PCDHGA6-201ENST00000517434 NAP1L5Q96NT1 182 aaPredicted RBP16.15■□□□□ 0.18
PCDHGA6-201ENST00000517434 FAM9BQ8IZU0 186 aa16.15■□□□□ 0.18
PCDHGA6-201ENST00000517434 TMC1Q8TDI8 760 aa16.15■□□□□ 0.18
PCDHGA6-201ENST00000517434 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.14■□□□□ 0.17
PCDHGA6-201ENST00000517434 DEKP35659 375 aaKnown RBP16.14■□□□□ 0.17
PCDHGA6-201ENST00000517434 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
PCDHGA6-201ENST00000517434 A0A0G2JS52 829 aa16.13■□□□□ 0.17
PCDHGA6-201ENST00000517434 EFCAB2Q5VUJ9 269 aa16.13■□□□□ 0.17
PCDHGA6-201ENST00000517434 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
PCDHGA6-201ENST00000517434 CFAP53Q96M91 514 aa16.12■□□□□ 0.17
PCDHGA6-201ENST00000517434 TOP2AP11388 1531 aaKnown RBP16.12■□□□□ 0.17
PCDHGA6-201ENST00000517434 NOP58Q9Y2X3 529 aaKnown RBP16.11■□□□□ 0.17
PCDHGA6-201ENST00000517434 IRX6P78412 446 aaPredicted RBP16.11■□□□□ 0.17
PCDHGA6-201ENST00000517434 POGKQ9P215 609 aa16.1■□□□□ 0.17
PCDHGA6-201ENST00000517434 BECN1Q14457 450 aa16.1■□□□□ 0.17
PCDHGA6-201ENST00000517434 RGL3Q3MIN7 710 aa16.07■□□□□ 0.16
PCDHGA6-201ENST00000517434 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
PCDHGA6-201ENST00000517434 ZBTB7CA1YPR0 619 aa16.07■□□□□ 0.16
PCDHGA6-201ENST00000517434 CDK11BP21127 795 aaKnown RBP16.07■□□□□ 0.16
PCDHGA6-201ENST00000517434 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
PCDHGA6-201ENST00000517434 FMN1Q68DA7 1419 aa16.04■□□□□ 0.16
PCDHGA6-201ENST00000517434 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
PCDHGA6-201ENST00000517434 RSPH4AQ5TD94 716 aa16.03■□□□□ 0.16
PCDHGA6-201ENST00000517434 ATAD2BQ9ULI0 1458 aa16.02■□□□□ 0.16
PCDHGA6-201ENST00000517434 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.16
PCDHGA6-201ENST00000517434 MLECQ14165 292 aa16.02■□□□□ 0.16
PCDHGA6-201ENST00000517434 SMARCA4P51532 1647 aa16.02■□□□□ 0.16
PCDHGA6-201ENST00000517434 MRS2Q9HD23 443 aa16.01■□□□□ 0.15
PCDHGA6-201ENST00000517434 KNSTRNQ9Y448 316 aa15.99■□□□□ 0.15
PCDHGA6-201ENST00000517434 GOLGA6L22H0YM25 854 aa15.99■□□□□ 0.15
PCDHGA6-201ENST00000517434 MYH16Q9H6N6 1097 aa15.99■□□□□ 0.15
PCDHGA6-201ENST00000517434 NUDCQ9Y266 331 aa15.98■□□□□ 0.15
PCDHGA6-201ENST00000517434 LMOD2Q6P5Q4 547 aa15.98■□□□□ 0.15
PCDHGA6-201ENST00000517434 PPP4R2Q9NY27 417 aa15.96■□□□□ 0.15
PCDHGA6-201ENST00000517434 RBM19Q9Y4C8 960 aaKnown RBP15.96■□□□□ 0.15
PCDHGA6-201ENST00000517434 LAS1LQ9Y4W2 734 aaKnown RBP15.96■□□□□ 0.15
PCDHGA6-201ENST00000517434 CARD11Q9BXL7 1154 aa15.96■□□□□ 0.15
PCDHGA6-201ENST00000517434 JPH4Q96JJ6 628 aa15.95■□□□□ 0.14
PCDHGA6-201ENST00000517434 GGT6Q6P531 493 aa15.95■□□□□ 0.14
PCDHGA6-201ENST00000517434 PNNQ9H307 717 aaKnown RBP15.94■□□□□ 0.14
PCDHGA6-201ENST00000517434 PLEKHG5O94827 1062 aa15.92■□□□□ 0.14
PCDHGA6-201ENST00000517434 SALL2Q9Y467 1007 aaPredicted RBP15.92■□□□□ 0.14
PCDHGA6-201ENST00000517434 DNTTIP2Q5QJE6 756 aaKnown RBP15.92■□□□□ 0.14
PCDHGA6-201ENST00000517434 FANCD2Q9BXW9 1451 aa15.91■□□□□ 0.14
PCDHGA6-201ENST00000517434 PTMAP06454 111 aaKnown RBP15.91■□□□□ 0.14
PCDHGA6-201ENST00000517434 EID1Q9Y6B2 187 aa15.9■□□□□ 0.14
PCDHGA6-201ENST00000517434 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA6-201ENST00000517434 RAPGEF2Q9Y4G8 1499 aa15.88■□□□□ 0.13
PCDHGA6-201ENST00000517434 L1TD1Q5T7N2 865 aaKnown RBP15.88■□□□□ 0.13
PCDHGA6-201ENST00000517434 ARHGAP35Q9NRY4 1499 aa15.88■□□□□ 0.13
PCDHGA6-201ENST00000517434 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
PCDHGA6-201ENST00000517434 ANKRD30AQ9BXX3 1397 aa15.88■□□□□ 0.13
PCDHGA6-201ENST00000517434 MAPK8IP3Q9UPT6 1336 aa15.87■□□□□ 0.13
PCDHGA6-201ENST00000517434 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.87■□□□□ 0.13
PCDHGA6-201ENST00000517434 SPAG9O60271 1321 aaKnown RBP15.85■□□□□ 0.13
PCDHGA6-201ENST00000517434 TMF1P82094 1093 aa15.85■□□□□ 0.13
PCDHGA6-201ENST00000517434 PTPRGP23470 1445 aa15.84■□□□□ 0.13
PCDHGA6-201ENST00000517434 TSHZ2Q9NRE2 1034 aa15.83■□□□□ 0.12
PCDHGA6-201ENST00000517434 CCDC18Q5T9S5 1454 aa15.83■□□□□ 0.12
PCDHGA6-201ENST00000517434 VPS8Q8N3P4 1428 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms