RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.03
PCDHGA6-201ENST00000517434 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
PCDHGA6-201ENST00000517434 SUPT5HO00267 1087 aaKnown RBP19.79■□□□□ 0.76
PCDHGA6-201ENST00000517434 PELP1Q8IZL8 1130 aaKnown RBP19.71■□□□□ 0.75
PCDHGA6-201ENST00000517434 MYT1Q01538 1121 aa19.59■□□□□ 0.73
PCDHGA6-201ENST00000517434 FAM9AQ8IZU1 332 aaPredicted RBP19.56■□□□□ 0.72
PCDHGA6-201ENST00000517434 SHROOM4Q9ULL8 1493 aa19.53■□□□□ 0.72
PCDHGA6-201ENST00000517434 APLP2Q06481 763 aa19.19■□□□□ 0.66
PCDHGA6-201ENST00000517434 CENPBP07199 599 aaPredicted RBP18.96■□□□□ 0.63
PCDHGA6-201ENST00000517434 ERICH6Q7L0X2 663 aa18.84■□□□□ 0.61
PCDHGA6-201ENST00000517434 EHMT2Q96KQ7 1210 aa18.8■□□□□ 0.6
PCDHGA6-201ENST00000517434 PCGF6Q9BYE7 350 aa18.75■□□□□ 0.59
PCDHGA6-201ENST00000517434 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
PCDHGA6-201ENST00000517434 ZEB1P37275 1124 aaPredicted RBP18.72■□□□□ 0.59
PCDHGA6-201ENST00000517434 TRIM41Q8WV44 630 aa18.6■□□□□ 0.57
PCDHGA6-201ENST00000517434 ATP1B4Q9UN42 357 aaPredicted RBP18.45■□□□□ 0.54
PCDHGA6-201ENST00000517434 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
PCDHGA6-201ENST00000517434 RANGAP1P46060 587 aaPredicted RBP18.34■□□□□ 0.53
PCDHGA6-201ENST00000517434 ABCC9O60706 1549 aa18.34■□□□□ 0.53
PCDHGA6-201ENST00000517434 NEFLP07196 543 aa18.27■□□□□ 0.52
PCDHGA6-201ENST00000517434 HRCP23327 699 aa18.25■□□□□ 0.51
PCDHGA6-201ENST00000517434 YTHDC1Q96MU7 727 aaKnown RBP18.14■□□□□ 0.49
PCDHGA6-201ENST00000517434 TTBK1Q5TCY1 1321 aaPredicted RBP18.12■□□□□ 0.49
PCDHGA6-201ENST00000517434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
PCDHGA6-201ENST00000517434 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
PCDHGA6-201ENST00000517434 MYT1LQ9UL68 1186 aa18.07■□□□□ 0.48
PCDHGA6-201ENST00000517434 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
PCDHGA6-201ENST00000517434 TRIM26Q12899 539 aaPredicted RBP17.86■□□□□ 0.45
PCDHGA6-201ENST00000517434 DAXXQ9UER7 740 aaPredicted RBP17.72■□□□□ 0.43
PCDHGA6-201ENST00000517434 RTL5Q5HYW3 569 aaPredicted RBP17.7■□□□□ 0.42
PCDHGA6-201ENST00000517434 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
PCDHGA6-201ENST00000517434 PPARGC1BQ86YN6 1023 aaKnown RBP17.66■□□□□ 0.42
PCDHGA6-201ENST00000517434 CCDC180Q9P1Z9 1646 aa17.65■□□□□ 0.42
PCDHGA6-201ENST00000517434 ZCCHC6Q5VYS8 1495 aaKnown RBP17.64■□□□□ 0.41
PCDHGA6-201ENST00000517434 FBLN2P98095 1184 aa17.6■□□□□ 0.41
PCDHGA6-201ENST00000517434 GTF3C3Q9Y5Q9 886 aa17.55■□□□□ 0.4
PCDHGA6-201ENST00000517434 ITGAEP38570 1179 aa17.52■□□□□ 0.4
PCDHGA6-201ENST00000517434 DIEXFQ68CQ4 756 aaKnown RBP17.51■□□□□ 0.39
PCDHGA6-201ENST00000517434 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
PCDHGA6-201ENST00000517434 NPM1P06748 294 aaKnown RBP eCLIP17.38■□□□□ 0.37
PCDHGA6-201ENST00000517434 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
PCDHGA6-201ENST00000517434 LOC105371045A0A1W2PR82 267 aa17.37■□□□□ 0.37
PCDHGA6-201ENST00000517434 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
PCDHGA6-201ENST00000517434 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
PCDHGA6-201ENST00000517434 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
PCDHGA6-201ENST00000517434 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
PCDHGA6-201ENST00000517434 POLR3GLQ9BT43 218 aa17.3■□□□□ 0.36
PCDHGA6-201ENST00000517434 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
PCDHGA6-201ENST00000517434 TRIM52Q96A61 297 aa17.25■□□□□ 0.35
PCDHGA6-201ENST00000517434 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
PCDHGA6-201ENST00000517434 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
PCDHGA6-201ENST00000517434 NACADO15069 1562 aa17.17■□□□□ 0.34
PCDHGA6-201ENST00000517434 BCANQ96GW7 911 aa17.16■□□□□ 0.34
PCDHGA6-201ENST00000517434 GLIPR1L2Q4G1C9 344 aa17.12■□□□□ 0.33
PCDHGA6-201ENST00000517434 EIF5BO60841 1220 aaKnown RBP17.11■□□□□ 0.33
PCDHGA6-201ENST00000517434 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
PCDHGA6-201ENST00000517434 MYO15BQ96JP2 1530 aa17.07■□□□□ 0.32
PCDHGA6-201ENST00000517434 CHMP7Q8WUX9 453 aaPredicted RBP17.05■□□□□ 0.32
PCDHGA6-201ENST00000517434 DCAF1Q9Y4B6 1507 aa17.02■□□□□ 0.31
PCDHGA6-201ENST00000517434 P3H3Q8IVL6 736 aa17■□□□□ 0.31
PCDHGA6-201ENST00000517434 ZNF777Q9ULD5 760 aaPredicted RBP16.98■□□□□ 0.31
PCDHGA6-201ENST00000517434 ANP32AP39687 249 aaKnown RBP16.94■□□□□ 0.3
PCDHGA6-201ENST00000517434 STAG3Q9UJ98 1225 aa16.93■□□□□ 0.3
PCDHGA6-201ENST00000517434 ARID3CA6NKF2 412 aa16.92■□□□□ 0.3
PCDHGA6-201ENST00000517434 NEFMP07197 916 aa16.91■□□□□ 0.3
PCDHGA6-201ENST00000517434 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
PCDHGA6-201ENST00000517434 ZNF326Q5BKZ1 582 aaKnown RBP16.87■□□□□ 0.29
PCDHGA6-201ENST00000517434 ERCC6Q03468 1493 aa16.85■□□□□ 0.29
PCDHGA6-201ENST00000517434 BAZ1BQ9UIG0 1483 aaKnown RBP16.85■□□□□ 0.29
PCDHGA6-201ENST00000517434 CNGB1Q14028 1251 aaPredicted RBP16.84■□□□□ 0.29
PCDHGA6-201ENST00000517434 NEUROD1Q13562 356 aa16.84■□□□□ 0.29
PCDHGA6-201ENST00000517434 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
PCDHGA6-201ENST00000517434 ANP32CO43423 234 aa16.83■□□□□ 0.28
PCDHGA6-201ENST00000517434 TSPY4P0CV99 314 aa16.81■□□□□ 0.28
PCDHGA6-201ENST00000517434 TSPY10P0CW01 314 aa16.81■□□□□ 0.28
PCDHGA6-201ENST00000517434 CHGAP10645 457 aaKnown RBP16.74■□□□□ 0.27
PCDHGA6-201ENST00000517434 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
PCDHGA6-201ENST00000517434 ANP32EQ9BTT0 268 aa16.72■□□□□ 0.27
PCDHGA6-201ENST00000517434 EEA1Q15075 1411 aa16.71■□□□□ 0.27
PCDHGA6-201ENST00000517434 PLEKHD1A6NEE1 506 aa16.71■□□□□ 0.27
PCDHGA6-201ENST00000517434 FKBP8Q14318 412 aa16.71■□□□□ 0.27
PCDHGA6-201ENST00000517434 MTUS2Q5JR59 1369 aa16.69■□□□□ 0.26
PCDHGA6-201ENST00000517434 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
PCDHGA6-201ENST00000517434 ANP32BQ92688 251 aaKnown RBP16.64■□□□□ 0.25
PCDHGA6-201ENST00000517434 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
PCDHGA6-201ENST00000517434 PLPPR3Q6T4P5 718 aa16.63■□□□□ 0.25
PCDHGA6-201ENST00000517434 SLC24A1O60721 1099 aa16.62■□□□□ 0.25
PCDHGA6-201ENST00000517434 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
PCDHGA6-201ENST00000517434 NBR1Q14596 966 aa16.6■□□□□ 0.25
PCDHGA6-201ENST00000517434 BCL11AQ9H165 835 aa16.59■□□□□ 0.25
PCDHGA6-201ENST00000517434 WRNQ14191 1432 aaPredicted RBP eCLIP16.58■□□□□ 0.24
PCDHGA6-201ENST00000517434 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
PCDHGA6-201ENST00000517434 KCNH8Q96L42 1107 aa16.56■□□□□ 0.24
PCDHGA6-201ENST00000517434 CECR2Q9BXF3 1484 aa16.55■□□□□ 0.24
PCDHGA6-201ENST00000517434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCDHGA6-201ENST00000517434 TONSLQ96HA7 1378 aa16.55■□□□□ 0.24
PCDHGA6-201ENST00000517434 ARID4BQ4LE39 1312 aaPredicted RBP16.52■□□□□ 0.23
PCDHGA6-201ENST00000517434 PPP1R15AO75807 674 aaPredicted RBP16.51■□□□□ 0.23
PCDHGA6-201ENST00000517434 CANXP27824 592 aaKnown RBP16.49■□□□□ 0.23
PCDHGA6-201ENST00000517434 CLIP1P30622 1438 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms