RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 PRDM2Q13029 1718 aa9.9□□□□□ -0.82
SCARNA6.1-201ENST00000516989 ABCC8Q09428 1581 aa9.89□□□□□ -0.83
SCARNA6.1-201ENST00000516989 WDR62O43379 1518 aa9.89□□□□□ -0.83
SCARNA6.1-201ENST00000516989 TOPBP1Q92547 1522 aa9.88□□□□□ -0.83
SCARNA6.1-201ENST00000516989 ZBTB12Q9Y330 459 aaPredicted RBP9.88□□□□□ -0.83
SCARNA6.1-201ENST00000516989 C1QBPQ07021 282 aaKnown RBP9.87□□□□□ -0.83
SCARNA6.1-201ENST00000516989 ABCB7O75027 752 aa9.86□□□□□ -0.83
SCARNA6.1-201ENST00000516989 WRNQ14191 1432 aaPredicted RBP eCLIP9.85□□□□□ -0.83
SCARNA6.1-201ENST00000516989 DNMBPQ6XZF7 1577 aa9.84□□□□□ -0.83
SCARNA6.1-201ENST00000516989 PKD2Q13563 968 aa9.84□□□□□ -0.83
SCARNA6.1-201ENST00000516989 CUX1P39880 1505 aa9.83□□□□□ -0.84
SCARNA6.1-201ENST00000516989 SOGA1O94964 1423 aa9.82□□□□□ -0.84
SCARNA6.1-201ENST00000516989 POLA1P09884 1462 aaPredicted RBP9.8□□□□□ -0.84
SCARNA6.1-201ENST00000516989 FGD5Q6ZNL6 1462 aa9.8□□□□□ -0.84
SCARNA6.1-201ENST00000516989 IFT140Q96RY7 1462 aa9.8□□□□□ -0.84
SCARNA6.1-201ENST00000516989 RAD54L2Q9Y4B4 1467 aa9.8□□□□□ -0.84
SCARNA6.1-201ENST00000516989 TRIM41Q8WV44 630 aa9.8□□□□□ -0.84
SCARNA6.1-201ENST00000516989 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
SCARNA6.1-201ENST00000516989 TDRD9Q8NDG6 1382 aaKnown RBP9.77□□□□□ -0.84
SCARNA6.1-201ENST00000516989 KLHL34Q8N239 644 aa9.77□□□□□ -0.85
SCARNA6.1-201ENST00000516989 ZNF692Q9BU19 519 aaPredicted RBP9.76□□□□□ -0.85
SCARNA6.1-201ENST00000516989 ZNF608Q9ULD9 1512 aaPredicted RBP9.76□□□□□ -0.85
SCARNA6.1-201ENST00000516989 SYNJ1O43426 1573 aa9.75□□□□□ -0.85
SCARNA6.1-201ENST00000516989 AQRO60306 1485 aaKnown RBP eCLIP9.75□□□□□ -0.85
SCARNA6.1-201ENST00000516989 TOP2BQ02880 1626 aa9.74□□□□□ -0.85
SCARNA6.1-201ENST00000516989 SPOCK2Q92563 424 aa9.74□□□□□ -0.85
SCARNA6.1-201ENST00000516989 STAG3Q9UJ98 1225 aa9.72□□□□□ -0.85
SCARNA6.1-201ENST00000516989 BIVM-ERCC5R4GMW8 1640 aa9.71□□□□□ -0.85
SCARNA6.1-201ENST00000516989 TARBP1Q13395 1621 aaKnown RBP9.71□□□□□ -0.86
SCARNA6.1-201ENST00000516989 ABCA10Q8WWZ4 1543 aa9.69□□□□□ -0.86
SCARNA6.1-201ENST00000516989 GAPVD1Q14C86 1478 aa9.68□□□□□ -0.86
SCARNA6.1-201ENST00000516989 ECM2O94769 699 aaPredicted RBP9.68□□□□□ -0.86
SCARNA6.1-201ENST00000516989 DSG3P32926 999 aa9.68□□□□□ -0.86
SCARNA6.1-201ENST00000516989 SPDYE2BA6NHP3 402 aa9.67□□□□□ -0.86
SCARNA6.1-201ENST00000516989 SPDYE6P0CI01 402 aa9.67□□□□□ -0.86
SCARNA6.1-201ENST00000516989 SPDYE2Q495Y8 402 aa9.67□□□□□ -0.86
SCARNA6.1-201ENST00000516989 PLCD3Q8N3E9 789 aa9.67□□□□□ -0.86
SCARNA6.1-201ENST00000516989 CHMP7Q8WUX9 453 aaPredicted RBP9.67□□□□□ -0.86
SCARNA6.1-201ENST00000516989 OSCARQ8IYS5 282 aa9.66□□□□□ -0.86
SCARNA6.1-201ENST00000516989 KIF27Q86VH2 1401 aa9.65□□□□□ -0.86
SCARNA6.1-201ENST00000516989 VSIG10Q8N0Z9 540 aa9.65□□□□□ -0.86
SCARNA6.1-201ENST00000516989 SSUH2Q9Y2M2 353 aa9.65□□□□□ -0.86
SCARNA6.1-201ENST00000516989 EIF4G3O43432 1585 aaKnown RBP9.65□□□□□ -0.86
SCARNA6.1-201ENST00000516989 GRIN2BQ13224 1484 aa9.65□□□□□ -0.87
SCARNA6.1-201ENST00000516989 BBXQ8WY36 941 aaPredicted RBP9.64□□□□□ -0.87
SCARNA6.1-201ENST00000516989 FAM9AQ8IZU1 332 aaPredicted RBP9.63□□□□□ -0.87
SCARNA6.1-201ENST00000516989 MIER1Q8N108 512 aa9.63□□□□□ -0.87
SCARNA6.1-201ENST00000516989 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.63□□□□□ -0.87
SCARNA6.1-201ENST00000516989 SNAPC4Q5SXM2 1469 aa9.62□□□□□ -0.87
SCARNA6.1-201ENST00000516989 IGF1RP08069 1367 aa9.62□□□□□ -0.87
SCARNA6.1-201ENST00000516989 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
SCARNA6.1-201ENST00000516989 WDR97A6NE52 1622 aa9.6□□□□□ -0.87
SCARNA6.1-201ENST00000516989 BCANQ96GW7 911 aa9.6□□□□□ -0.87
SCARNA6.1-201ENST00000516989 RUSC2Q8N2Y8 1516 aa9.6□□□□□ -0.87
SCARNA6.1-201ENST00000516989 ABCA5Q8WWZ7 1642 aa9.59□□□□□ -0.87
SCARNA6.1-201ENST00000516989 MAGI1Q96QZ7 1491 aaPredicted RBP9.59□□□□□ -0.87
SCARNA6.1-201ENST00000516989 PAXIP1Q6ZW49 1069 aaPredicted RBP9.58□□□□□ -0.88
SCARNA6.1-201ENST00000516989 RGL2O15211 777 aa9.57□□□□□ -0.88
SCARNA6.1-201ENST00000516989 POTEDQ86YR6 584 aa9.57□□□□□ -0.88
SCARNA6.1-201ENST00000516989 CARMIL1Q5VZK9 1371 aa9.57□□□□□ -0.88
SCARNA6.1-201ENST00000516989 SYNJ2O15056 1496 aa9.57□□□□□ -0.88
SCARNA6.1-201ENST00000516989 FHAD1B1AJZ9 1412 aa9.56□□□□□ -0.88
SCARNA6.1-201ENST00000516989 ERICH3Q5RHP9 1530 aa9.56□□□□□ -0.88
SCARNA6.1-201ENST00000516989 PBRM1Q86U86 1689 aa9.55□□□□□ -0.88
SCARNA6.1-201ENST00000516989 CFAP44Q96MT7 982 aa9.55□□□□□ -0.88
SCARNA6.1-201ENST00000516989 KDM2AQ9Y2K7 1162 aa9.53□□□□□ -0.88
SCARNA6.1-201ENST00000516989 CIZ1Q9ULV3 898 aaPredicted RBP9.52□□□□□ -0.89
SCARNA6.1-201ENST00000516989 PLEKHG5O94827 1062 aa9.51□□□□□ -0.89
SCARNA6.1-201ENST00000516989 GRIN2AQ12879 1464 aa9.51□□□□□ -0.89
SCARNA6.1-201ENST00000516989 CHD1O14646 1710 aa9.51□□□□□ -0.89
SCARNA6.1-201ENST00000516989 ADAMTS12P58397 1594 aa9.5□□□□□ -0.89
SCARNA6.1-201ENST00000516989 EEA1Q15075 1411 aa9.5□□□□□ -0.89
SCARNA6.1-201ENST00000516989 SPRYD3Q8NCJ5 442 aa9.49□□□□□ -0.89
SCARNA6.1-201ENST00000516989 ZBTB47Q9UFB7 747 aaPredicted RBP9.49□□□□□ -0.89
SCARNA6.1-201ENST00000516989 RAPGEF2Q9Y4G8 1499 aa9.48□□□□□ -0.89
SCARNA6.1-201ENST00000516989 PRKCSHP14314 528 aaPredicted RBP9.48□□□□□ -0.89
SCARNA6.1-201ENST00000516989 JPH4Q96JJ6 628 aa9.48□□□□□ -0.89
SCARNA6.1-201ENST00000516989 CUL7Q14999 1698 aa9.46□□□□□ -0.89
SCARNA6.1-201ENST00000516989 UBTFP17480 764 aaKnown RBP9.46□□□□□ -0.9
SCARNA6.1-201ENST00000516989 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
SCARNA6.1-201ENST00000516989 NUP160Q12769 1436 aa9.46□□□□□ -0.9
SCARNA6.1-201ENST00000516989 PRXQ9BXM0 1461 aa9.46□□□□□ -0.9
SCARNA6.1-201ENST00000516989 CHGAP10645 457 aaKnown RBP9.45□□□□□ -0.9
SCARNA6.1-201ENST00000516989 RANGAP1P46060 587 aaPredicted RBP9.44□□□□□ -0.9
SCARNA6.1-201ENST00000516989 CEP170Q5SW79 1584 aa9.43□□□□□ -0.9
SCARNA6.1-201ENST00000516989 CYB5RLQ6IPT4 315 aa9.43□□□□□ -0.9
SCARNA6.1-201ENST00000516989 TSHZ2Q9NRE2 1034 aa9.43□□□□□ -0.9
SCARNA6.1-201ENST00000516989 KIAA0586Q9BVV6 1533 aa9.41□□□□□ -0.9
SCARNA6.1-201ENST00000516989 TTBK1Q5TCY1 1321 aaPredicted RBP9.41□□□□□ -0.9
SCARNA6.1-201ENST00000516989 CLASP1Q7Z460 1538 aa9.41□□□□□ -0.9
SCARNA6.1-201ENST00000516989 PRG4Q92954 1404 aaPredicted RBP9.39□□□□□ -0.91
SCARNA6.1-201ENST00000516989 ARHGEF11O15085 1522 aa9.38□□□□□ -0.91
SCARNA6.1-201ENST00000516989 LOC105371045A0A1W2PR82 267 aa9.38□□□□□ -0.91
SCARNA6.1-201ENST00000516989 P3H3Q8IVL6 736 aa9.37□□□□□ -0.91
SCARNA6.1-201ENST00000516989 ILDR1Q86SU0 546 aaPredicted RBP9.36□□□□□ -0.91
SCARNA6.1-201ENST00000516989 GOLGA3Q08378 1498 aa9.35□□□□□ -0.91
SCARNA6.1-201ENST00000516989 RIMBP3CA6NJZ7 1639 aa9.35□□□□□ -0.91
SCARNA6.1-201ENST00000516989 RIMBP3BA6NNM3 1639 aa9.35□□□□□ -0.91
SCARNA6.1-201ENST00000516989 RIMBP3Q9UFD9 1639 aa9.35□□□□□ -0.91
SCARNA6.1-201ENST00000516989 CARMIL2Q6F5E8 1435 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms