RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 WDR97A6NE52 1622 aa18.55■□□□□ 0.56
PHF3-212ENST00000515594 TSHZ2Q9NRE2 1034 aa18.55■□□□□ 0.56
PHF3-212ENST00000515594 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
PHF3-212ENST00000515594 TIAM1Q13009 1591 aa18.52■□□□□ 0.56
PHF3-212ENST00000515594 CARMIL1Q5VZK9 1371 aa18.52■□□□□ 0.55
PHF3-212ENST00000515594 SETD5Q9C0A6 1442 aa18.5■□□□□ 0.55
PHF3-212ENST00000515594 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
PHF3-212ENST00000515594 LRRC9Q6ZRR7 1453 aa18.48■□□□□ 0.55
PHF3-212ENST00000515594 FGD5Q6ZNL6 1462 aa18.47■□□□□ 0.55
PHF3-212ENST00000515594 FKBP8Q14318 412 aa18.47■□□□□ 0.55
PHF3-212ENST00000515594 MYT1Q01538 1121 aa18.47■□□□□ 0.55
PHF3-212ENST00000515594 FHOD3Q2V2M9 1422 aa18.46■□□□□ 0.55
PHF3-212ENST00000515594 PCF11O94913 1555 aaKnown RBP18.43■□□□□ 0.54
PHF3-212ENST00000515594 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
PHF3-212ENST00000515594 PPP1R15AO75807 674 aaPredicted RBP18.38■□□□□ 0.53
PHF3-212ENST00000515594 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
PHF3-212ENST00000515594 FHAD1B1AJZ9 1412 aa18.29■□□□□ 0.52
PHF3-212ENST00000515594 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
PHF3-212ENST00000515594 CFAP43Q8NDM7 1665 aa18.28■□□□□ 0.52
PHF3-212ENST00000515594 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
PHF3-212ENST00000515594 ANP32CO43423 234 aa18.27■□□□□ 0.52
PHF3-212ENST00000515594 IRX6P78412 446 aaPredicted RBP18.27■□□□□ 0.52
PHF3-212ENST00000515594 PTPRKQ15262 1439 aa18.26■□□□□ 0.51
PHF3-212ENST00000515594 NESP48681 1621 aa18.25■□□□□ 0.51
PHF3-212ENST00000515594 FANCD2Q9BXW9 1451 aa18.25■□□□□ 0.51
PHF3-212ENST00000515594 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
PHF3-212ENST00000515594 TONSLQ96HA7 1378 aa18.24■□□□□ 0.51
PHF3-212ENST00000515594 CHIC2Q9UKJ5 165 aa18.23■□□□□ 0.51
PHF3-212ENST00000515594 ANP32EQ9BTT0 268 aa18.2■□□□□ 0.5
PHF3-212ENST00000515594 MTUS2Q5JR59 1369 aa18.2■□□□□ 0.5
PHF3-212ENST00000515594 FGD6Q6ZV73 1430 aa18.2■□□□□ 0.5
PHF3-212ENST00000515594 CCDC18Q5T9S5 1454 aa18.2■□□□□ 0.5
PHF3-212ENST00000515594 NEFLP07196 543 aa18.2■□□□□ 0.5
PHF3-212ENST00000515594 RRP7BPQ9NSQ0 103 aa18.19■□□□□ 0.5
PHF3-212ENST00000515594 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.53e-7■■■□□ 16.4
PHF3-212ENST00000515594 POLA1P09884 1462 aaPredicted RBP18.19■□□□□ 0.5
PHF3-212ENST00000515594 FYCO1Q9BQS8 1478 aa18.17■□□□□ 0.5
PHF3-212ENST00000515594 CASKIN1Q8WXD9 1431 aa18.17■□□□□ 0.5
PHF3-212ENST00000515594 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
PHF3-212ENST00000515594 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
PHF3-212ENST00000515594 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.5
PHF3-212ENST00000515594 CC2D2AQ9P2K1 1620 aa18.15■□□□□ 0.5
PHF3-212ENST00000515594 FOXD1Q16676 465 aa18.14■□□□□ 0.49
PHF3-212ENST00000515594 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
PHF3-212ENST00000515594 LRRIQ1Q96JM4 1722 aa18.12■□□□□ 0.49
PHF3-212ENST00000515594 CCER2I3L3R5 266 aa18.12■□□□□ 0.49
PHF3-212ENST00000515594 CCDC184Q52MB2 194 aa18.11■□□□□ 0.49
PHF3-212ENST00000515594 CNGB1Q14028 1251 aaPredicted RBP18.11■□□□□ 0.49
PHF3-212ENST00000515594 SNAPC4Q5SXM2 1469 aa18.11■□□□□ 0.49
PHF3-212ENST00000515594 TIMELESSQ9UNS1 1208 aa18.1■□□□□ 0.49
PHF3-212ENST00000515594 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
PHF3-212ENST00000515594 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
PHF3-212ENST00000515594 NAIPQ13075 1403 aa18.09■□□□□ 0.49
PHF3-212ENST00000515594 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
PHF3-212ENST00000515594 CTTNBP2Q8WZ74 1663 aa18.08■□□□□ 0.49
PHF3-212ENST00000515594 NCOA2Q15596 1464 aa18.08■□□□□ 0.48
PHF3-212ENST00000515594 DNMBPQ6XZF7 1577 aa18.08■□□□□ 0.48
PHF3-212ENST00000515594 UACAQ9BZF9 1416 aa18.07■□□□□ 0.48
PHF3-212ENST00000515594 HFM1A2PYH4 1435 aa18.07■□□□□ 0.48
PHF3-212ENST00000515594 HSPA5P11021 654 aaKnown RBP18.07■□□□□ 0.48
PHF3-212ENST00000515594 WASHC2AQ641Q2 1341 aa18.06■□□□□ 0.48
PHF3-212ENST00000515594 EFCAB5A4FU69 1503 aa18.06■□□□□ 0.48
PHF3-212ENST00000515594 FMN1Q68DA7 1419 aa18.06■□□□□ 0.48
PHF3-212ENST00000515594 SENP3-EIF4A1A0A087X0R7 540 aa18.05■□□□□ 0.48
PHF3-212ENST00000515594 KDM5BQ9UGL1 1544 aa18.03■□□□□ 0.48
PHF3-212ENST00000515594 MYOM3Q5VTT5 1437 aa18.02■□□□□ 0.48
PHF3-212ENST00000515594 MAGI3Q5TCQ9 1506 aa18.02■□□□□ 0.47
PHF3-212ENST00000515594 C11orf95C9JLR9 678 aaPredicted RBP18.02■□□□□ 0.47
PHF3-212ENST00000515594 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.01■□□□□ 0.47
PHF3-212ENST00000515594 KDM6BO15054 1643 aa18.01■□□□□ 0.47
PHF3-212ENST00000515594 MSH5O43196 834 aa18■□□□□ 0.47
PHF3-212ENST00000515594 URB2Q14146 1524 aaKnown RBP18■□□□□ 0.47
PHF3-212ENST00000515594 FAM9BQ8IZU0 186 aa17.99■□□□□ 0.47
PHF3-212ENST00000515594 DENND4BO75064 1496 aaPredicted RBP17.99■□□□□ 0.47
PHF3-212ENST00000515594 CUL7Q14999 1698 aa17.98■□□□□ 0.47
PHF3-212ENST00000515594 GRIN2BQ13224 1484 aa17.96■□□□□ 0.47
PHF3-212ENST00000515594 L3MBTL2Q969R5 705 aa17.96■□□□□ 0.47
PHF3-212ENST00000515594 GAPVD1Q14C86 1478 aa17.93■□□□□ 0.46
PHF3-212ENST00000515594 SUPT6HQ7KZ85 1726 aaKnown RBP17.93■□□□□ 0.46
PHF3-212ENST00000515594 SAMD9Q5K651 1589 aa17.92■□□□□ 0.46
PHF3-212ENST00000515594 MPHOSPH9Q99550 1183 aa17.92■□□□□ 0.46
PHF3-212ENST00000515594 CDK13Q14004 1512 aaKnown RBP17.92■□□□□ 0.46
PHF3-212ENST00000515594 EIF4G2P78344 907 aaKnown RBP eCLIP17.91■□□□□ 0.46
PHF3-212ENST00000515594 NBPF8Q3BBV2 869 aa17.9■□□□□ 0.46
PHF3-212ENST00000515594 POLR3GLQ9BT43 218 aa17.9■□□□□ 0.46
PHF3-212ENST00000515594 ZNF644Q9H582 1327 aaPredicted RBP17.89■□□□□ 0.45
PHF3-212ENST00000515594 UGGT2Q9NYU1 1516 aa17.88■□□□□ 0.45
PHF3-212ENST00000515594 B4GALNT3Q6L9W6 998 aa17.88■□□□□ 0.45
PHF3-212ENST00000515594 MRS2Q9HD23 443 aa17.87■□□□□ 0.45
PHF3-212ENST00000515594 EHBP1L1Q8N3D4 1523 aa17.87■□□□□ 0.45
PHF3-212ENST00000515594 ABCA5Q8WWZ7 1642 aa17.86■□□□□ 0.45
PHF3-212ENST00000515594 ZNF326Q5BKZ1 582 aaKnown RBP17.85■□□□□ 0.45
PHF3-212ENST00000515594 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
PHF3-212ENST00000515594 BCL11AQ9H165 835 aa17.84■□□□□ 0.45
PHF3-212ENST00000515594 PRKRIP1Q9H875 184 aaPredicted RBP17.84■□□□□ 0.45
PHF3-212ENST00000515594 CDK11AQ9UQ88 783 aaPredicted RBP17.83■□□□□ 0.44
PHF3-212ENST00000515594 CNTLNQ9NXG0 1405 aa17.82■□□□□ 0.44
PHF3-212ENST00000515594 CCDC7Q96M83 1385 aa17.81■□□□□ 0.44
PHF3-212ENST00000515594 THOC2Q8NI27 1593 aaKnown RBP17.8■□□□□ 0.44
PHF3-212ENST00000515594 ARHGEF11O15085 1522 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms