RNA–Protein interactions for RNA: ENST00000514561.5

SEC24D-214, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 3,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-214ENST00000514561 FAM50AQ14320 339 aaKnown RBP6.9□□□□□ -1.3
SEC24D-214ENST00000514561 ARID3CA6NKF2 412 aa6.9□□□□□ -1.31
SEC24D-214ENST00000514561 WRNQ14191 1432 aaPredicted RBP eCLIP6.88□□□□□ -1.31
SEC24D-214ENST00000514561 TSHZ2Q9NRE2 1034 aa6.87□□□□□ -1.31
SEC24D-214ENST00000514561 ABCC8Q09428 1581 aa6.86□□□□□ -1.31
SEC24D-214ENST00000514561 CLSPNQ9HAW4 1339 aa6.86□□□□□ -1.31
SEC24D-214ENST00000514561 CNGB1Q14028 1251 aaPredicted RBP6.86□□□□□ -1.31
SEC24D-214ENST00000514561 CCDC88BA6NC98 1476 aa6.86□□□□□ -1.31
SEC24D-214ENST00000514561 KIF21BO75037 1637 aa6.85□□□□□ -1.31
SEC24D-214ENST00000514561 KIF21AQ7Z4S6 1674 aa6.84□□□□□ -1.31
SEC24D-214ENST00000514561 SOGA1O94964 1423 aa6.82□□□□□ -1.32
SEC24D-214ENST00000514561 EEA1Q15075 1411 aa6.82□□□□□ -1.32
SEC24D-214ENST00000514561 EIF5BO60841 1220 aaKnown RBP6.82□□□□□ -1.32
SEC24D-214ENST00000514561 HAP1P54257 671 aaPredicted RBP6.82□□□□□ -1.32
SEC24D-214ENST00000514561 SUPT16HQ9Y5B9 1047 aaKnown RBP6.82□□□□□ -1.32
SEC24D-214ENST00000514561 DNMBPQ6XZF7 1577 aa6.81□□□□□ -1.32
SEC24D-214ENST00000514561 POLR3GLQ9BT43 218 aa6.81□□□□□ -1.32
SEC24D-214ENST00000514561 ERICH6Q7L0X2 663 aa6.81□□□□□ -1.32
SEC24D-214ENST00000514561 WDR62O43379 1518 aa6.81□□□□□ -1.32
SEC24D-214ENST00000514561 ERICH3Q5RHP9 1530 aa6.81□□□□□ -1.32
SEC24D-214ENST00000514561 THOC2Q8NI27 1593 aaKnown RBP6.81□□□□□ -1.32
SEC24D-214ENST00000514561 ABCA5Q8WWZ7 1642 aa6.81□□□□□ -1.32
SEC24D-214ENST00000514561 ZNF316A6NFI3 1004 aaPredicted RBP6.81□□□□□ -1.32
SEC24D-214ENST00000514561 CEP162Q5TB80 1403 aa6.8□□□□□ -1.32
SEC24D-214ENST00000514561 NPM2Q86SE8 214 aaKnown RBP6.8□□□□□ -1.32
SEC24D-214ENST00000514561 MIER1Q8N108 512 aa6.79□□□□□ -1.32
SEC24D-214ENST00000514561 CUL7Q14999 1698 aa6.79□□□□□ -1.32
SEC24D-214ENST00000514561 IGSF3O75054 1194 aa6.78□□□□□ -1.32
SEC24D-214ENST00000514561 CLIP1P30622 1438 aa6.78□□□□□ -1.32
SEC24D-214ENST00000514561 TARBP1Q13395 1621 aaKnown RBP6.78□□□□□ -1.32
SEC24D-214ENST00000514561 TRIM52Q96A61 297 aa6.77□□□□□ -1.33
SEC24D-214ENST00000514561 VSIG10Q8N0Z9 540 aa6.77□□□□□ -1.33
SEC24D-214ENST00000514561 MYT1LQ9UL68 1186 aa6.76□□□□□ -1.33
SEC24D-214ENST00000514561 FKBP8Q14318 412 aa6.75□□□□□ -1.33
SEC24D-214ENST00000514561 NPM1P06748 294 aaKnown RBP eCLIP6.74□□□□□ -1.33
SEC24D-214ENST00000514561 GOLGA3Q08378 1498 aa6.73□□□□□ -1.33
SEC24D-214ENST00000514561 DNAJC5Q9H3Z4 198 aa6.73□□□□□ -1.33
SEC24D-214ENST00000514561 SYNJ1O43426 1573 aa6.73□□□□□ -1.33
SEC24D-214ENST00000514561 TNIKQ9UKE5 1360 aa6.72□□□□□ -1.33
SEC24D-214ENST00000514561 ZNF326Q5BKZ1 582 aaKnown RBP6.71□□□□□ -1.33
SEC24D-214ENST00000514561 PIAS4Q8N2W9 510 aaPredicted RBP6.71□□□□□ -1.33
SEC24D-214ENST00000514561 PBRM1Q86U86 1689 aa6.71□□□□□ -1.34
SEC24D-214ENST00000514561 ABCA10Q8WWZ4 1543 aa6.71□□□□□ -1.34
SEC24D-214ENST00000514561 SAMD1Q6SPF0 538 aaPredicted RBP6.71□□□□□ -1.34
SEC24D-214ENST00000514561 ZNF777Q9ULD5 760 aaPredicted RBP6.71□□□□□ -1.34
SEC24D-214ENST00000514561 RUSC2Q8N2Y8 1516 aa6.71□□□□□ -1.34
SEC24D-214ENST00000514561 CTTNBP2Q8WZ74 1663 aa6.7□□□□□ -1.34
SEC24D-214ENST00000514561 CHIC2Q9UKJ5 165 aa6.7□□□□□ -1.34
SEC24D-214ENST00000514561 CUX1P39880 1505 aa6.7□□□□□ -1.34
SEC24D-214ENST00000514561 MSH5O43196 834 aa6.69□□□□□ -1.34
SEC24D-214ENST00000514561 NEFLP07196 543 aa6.69□□□□□ -1.34
SEC24D-214ENST00000514561 C1orf115Q9H7X2 142 aa6.69□□□□□ -1.34
SEC24D-214ENST00000514561 HIRIP3Q9BW71 556 aaPredicted RBP6.69□□□□□ -1.34
SEC24D-214ENST00000514561 MAP3K1Q13233 1512 aa6.68□□□□□ -1.34
SEC24D-214ENST00000514561 C14orf37Q86TY3 774 aa6.68□□□□□ -1.34
SEC24D-214ENST00000514561 CEP164Q9UPV0 1460 aa6.68□□□□□ -1.34
SEC24D-214ENST00000514561 CADPSQ9ULU8 1353 aa6.68□□□□□ -1.34
SEC24D-214ENST00000514561 NECTIN2Q92692 538 aa6.67□□□□□ -1.34
SEC24D-214ENST00000514561 DNAJC5BQ9UF47 199 aa6.67□□□□□ -1.34
SEC24D-214ENST00000514561 KIF27Q86VH2 1401 aa6.67□□□□□ -1.34
SEC24D-214ENST00000514561 SHROOM2Q13796 1616 aa6.65□□□□□ -1.34
SEC24D-214ENST00000514561 PKD2Q13563 968 aa6.65□□□□□ -1.34
SEC24D-214ENST00000514561 KANK4Q5T7N3 995 aaPredicted RBP6.65□□□□□ -1.34
SEC24D-214ENST00000514561 SAMD9Q5K651 1589 aa6.65□□□□□ -1.35
SEC24D-214ENST00000514561 CUX2O14529 1486 aa6.64□□□□□ -1.35
SEC24D-214ENST00000514561 PRXQ9BXM0 1461 aa6.64□□□□□ -1.35
SEC24D-214ENST00000514561 MTUS2Q5JR59 1369 aa6.63□□□□□ -1.35
SEC24D-214ENST00000514561 DDX10Q13206 875 aaKnown RBP6.63□□□□□ -1.35
SEC24D-214ENST00000514561 RBM19Q9Y4C8 960 aaKnown RBP6.63□□□□□ -1.35
SEC24D-214ENST00000514561 RRP7BPQ9NSQ0 103 aa6.62□□□□□ -1.35
SEC24D-214ENST00000514561 FANCIQ9NVI1 1328 aa6.62□□□□□ -1.35
SEC24D-214ENST00000514561 RAPGEF2Q9Y4G8 1499 aa6.62□□□□□ -1.35
SEC24D-214ENST00000514561 CHMP7Q8WUX9 453 aaPredicted RBP6.61□□□□□ -1.35
SEC24D-214ENST00000514561 CARMIL1Q5VZK9 1371 aa6.61□□□□□ -1.35
SEC24D-214ENST00000514561 TOPBP1Q92547 1522 aa6.61□□□□□ -1.35
SEC24D-214ENST00000514561 ADAMTS12P58397 1594 aa6.6□□□□□ -1.35
SEC24D-214ENST00000514561 MRC2Q9UBG0 1479 aa6.6□□□□□ -1.35
SEC24D-214ENST00000514561 CHMP4AQ9BY43 222 aa6.6□□□□□ -1.35
SEC24D-214ENST00000514561 TDRD9Q8NDG6 1382 aaKnown RBP6.6□□□□□ -1.35
SEC24D-214ENST00000514561 ANP32CO43423 234 aa6.6□□□□□ -1.35
SEC24D-214ENST00000514561 SIN3AQ96ST3 1273 aa6.6□□□□□ -1.35
SEC24D-214ENST00000514561 EFCAB5A4FU69 1503 aa6.6□□□□□ -1.35
SEC24D-214ENST00000514561 TONSLQ96HA7 1378 aa6.59□□□□□ -1.35
SEC24D-214ENST00000514561 CFAP43Q8NDM7 1665 aa6.59□□□□□ -1.35
SEC24D-214ENST00000514561 VPS8Q8N3P4 1428 aa6.59□□□□□ -1.35
SEC24D-214ENST00000514561 URB2Q14146 1524 aaKnown RBP6.59□□□□□ -1.36
SEC24D-214ENST00000514561 CDK11AQ9UQ88 783 aaPredicted RBP6.58□□□□□ -1.36
SEC24D-214ENST00000514561 AQRO60306 1485 aaKnown RBP eCLIP6.58□□□□□ -1.362e-6■■■■■ 35.6
SEC24D-214ENST00000514561 PDS5BQ9NTI5 1447 aa6.58□□□□□ -1.36
SEC24D-214ENST00000514561 FBXO3Q9UK99 471 aa6.57□□□□□ -1.36
SEC24D-214ENST00000514561 MAPK8IP2Q13387 824 aaPredicted RBP6.57□□□□□ -1.36
SEC24D-214ENST00000514561 FANCD2Q9BXW9 1451 aa6.57□□□□□ -1.36
SEC24D-214ENST00000514561 PPP4R3CPQ6ZMV5 832 aa6.56□□□□□ -1.36
SEC24D-214ENST00000514561 ANO8Q9HCE9 1232 aaPredicted RBP6.56□□□□□ -1.36
SEC24D-214ENST00000514561 IFT140Q96RY7 1462 aa6.56□□□□□ -1.36
SEC24D-214ENST00000514561 DHX57Q6P158 1386 aaKnown RBP6.55□□□□□ -1.36
SEC24D-214ENST00000514561 ADCY10Q96PN6 1610 aa6.55□□□□□ -1.36
SEC24D-214ENST00000514561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.55□□□□□ -1.362e-7■■■□□ 15.1
SEC24D-214ENST00000514561 CCNB3Q8WWL7 1395 aa6.55□□□□□ -1.36
SEC24D-214ENST00000514561 UBE2Q2Q8WVN8 375 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms