RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 SOGA1O94964 1423 aa15.07■□□□□ 0
CLDND1-229ENST00000513988 GRIN2BQ13224 1484 aa15.07■□□□□ 0
CLDND1-229ENST00000513988 DIP2BQ9P265 1576 aa15.01□□□□□ -0.01
CLDND1-229ENST00000513988 DISP3Q9P2K9 1392 aa15□□□□□ -0.01
CLDND1-229ENST00000513988 CEP170Q5SW79 1584 aa15□□□□□ -0.01
CLDND1-229ENST00000513988 TSPOAP1O95153 1857 aa14.98□□□□□ -0.01
CLDND1-229ENST00000513988 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
CLDND1-229ENST00000513988 MAPKBP1O60336 1514 aa14.95□□□□□ -0.02
CLDND1-229ENST00000513988 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
CLDND1-229ENST00000513988 CCDC88BA6NC98 1476 aa14.91□□□□□ -0.02
CLDND1-229ENST00000513988 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
CLDND1-229ENST00000513988 SHROOM2Q13796 1616 aa14.88□□□□□ -0.03
CLDND1-229ENST00000513988 GRIN2AQ12879 1464 aa14.86□□□□□ -0.03
CLDND1-229ENST00000513988 NUP160Q12769 1436 aa14.83□□□□□ -0.03
CLDND1-229ENST00000513988 MAPK8IP2Q13387 824 aaPredicted RBP14.81□□□□□ -0.04
CLDND1-229ENST00000513988 PRG4Q92954 1404 aaPredicted RBP14.81□□□□□ -0.04
CLDND1-229ENST00000513988 TOP2BQ02880 1626 aa14.8□□□□□ -0.04
CLDND1-229ENST00000513988 ADCY10Q96PN6 1610 aa14.77□□□□□ -0.05
CLDND1-229ENST00000513988 SPATA31D1Q6ZQQ2 1576 aa14.75□□□□□ -0.05
CLDND1-229ENST00000513988 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
CLDND1-229ENST00000513988 ADAMTS12P58397 1594 aa14.71□□□□□ -0.05
CLDND1-229ENST00000513988 CUX1P39880 1505 aa14.71□□□□□ -0.06
CLDND1-229ENST00000513988 PPRC1Q5VV67 1664 aaKnown RBP14.71□□□□□ -0.06
CLDND1-229ENST00000513988 JPH4Q96JJ6 628 aa14.7□□□□□ -0.06
CLDND1-229ENST00000513988 COL17A1Q9UMD9 1497 aaPredicted RBP14.69□□□□□ -0.06
CLDND1-229ENST00000513988 CERKQ8TCT0 537 aa14.67□□□□□ -0.06
CLDND1-229ENST00000513988 ABCA10Q8WWZ4 1543 aa14.66□□□□□ -0.06
CLDND1-229ENST00000513988 FHAD1B1AJZ9 1412 aa14.63□□□□□ -0.07
CLDND1-229ENST00000513988 GLI2P10070 1586 aa14.62□□□□□ -0.07
CLDND1-229ENST00000513988 TEX14Q8IWB6 1497 aa14.58□□□□□ -0.08
CLDND1-229ENST00000513988 PCF11O94913 1555 aaKnown RBP14.58□□□□□ -0.08
CLDND1-229ENST00000513988 DMRT2Q9Y5R5 561 aa14.57□□□□□ -0.08
CLDND1-229ENST00000513988 PLB1Q6P1J6 1458 aa14.57□□□□□ -0.08
CLDND1-229ENST00000513988 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
CLDND1-229ENST00000513988 ASXL2Q76L83 1435 aa14.56□□□□□ -0.08
CLDND1-229ENST00000513988 PTPRMP28827 1452 aa14.55□□□□□ -0.08
CLDND1-229ENST00000513988 RUSC2Q8N2Y8 1516 aa14.52□□□□□ -0.08
CLDND1-229ENST00000513988 KIF21BO75037 1637 aa14.51□□□□□ -0.09
CLDND1-229ENST00000513988 MAP3K4Q9Y6R4 1608 aa14.51□□□□□ -0.09
CLDND1-229ENST00000513988 ABCC2Q92887 1545 aa14.5□□□□□ -0.09
CLDND1-229ENST00000513988 PPP4R3CPQ6ZMV5 832 aa14.49□□□□□ -0.09
CLDND1-229ENST00000513988 EPRSP07814 1512 aaKnown RBP14.46□□□□□ -0.1
CLDND1-229ENST00000513988 ERICH3Q5RHP9 1530 aa14.46□□□□□ -0.1
CLDND1-229ENST00000513988 HSPA2P54652 639 aa14.45□□□□□ -0.1
CLDND1-229ENST00000513988 PTPRGP23470 1445 aa14.44□□□□□ -0.1
CLDND1-229ENST00000513988 ADAMTSL3P82987 1691 aa14.44□□□□□ -0.1
CLDND1-229ENST00000513988 TTBK1Q5TCY1 1321 aaPredicted RBP14.43□□□□□ -0.1
CLDND1-229ENST00000513988 KIAA0586Q9BVV6 1533 aa14.43□□□□□ -0.1
CLDND1-229ENST00000513988 CUL7Q14999 1698 aa14.42□□□□□ -0.1
CLDND1-229ENST00000513988 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
CLDND1-229ENST00000513988 MADDQ8WXG6 1647 aa14.33□□□□□ -0.11
CLDND1-229ENST00000513988 UHRF1BP1LA0JNW5 1464 aa14.32□□□□□ -0.12
CLDND1-229ENST00000513988 TNIKQ9UKE5 1360 aa14.32□□□□□ -0.12
CLDND1-229ENST00000513988 BCORL1Q5H9F3 1711 aa14.3□□□□□ -0.12
CLDND1-229ENST00000513988 MAGI3Q5TCQ9 1506 aa14.29□□□□□ -0.12
CLDND1-229ENST00000513988 ARID4BQ4LE39 1312 aaPredicted RBP14.28□□□□□ -0.12
CLDND1-229ENST00000513988 CD109Q6YHK3 1445 aa14.28□□□□□ -0.12
CLDND1-229ENST00000513988 UACAQ9BZF9 1416 aa14.28□□□□□ -0.12
CLDND1-229ENST00000513988 KDM5BQ9UGL1 1544 aa14.27□□□□□ -0.12
CLDND1-229ENST00000513988 CARMIL2Q6F5E8 1435 aa14.27□□□□□ -0.12
CLDND1-229ENST00000513988 RIMS1Q86UR5 1692 aaKnown RBP14.26□□□□□ -0.13
CLDND1-229ENST00000513988 ZCCHC11Q5TAX3 1644 aaKnown RBP14.25□□□□□ -0.13
CLDND1-229ENST00000513988 WDR7Q9Y4E6 1490 aa14.24□□□□□ -0.13
CLDND1-229ENST00000513988 CFAP43Q8NDM7 1665 aa14.23□□□□□ -0.13
CLDND1-229ENST00000513988 ARAP3Q8WWN8 1544 aa14.21□□□□□ -0.13
CLDND1-229ENST00000513988 YEATS2Q9ULM3 1422 aa14.18□□□□□ -0.14
CLDND1-229ENST00000513988 BIVM-ERCC5R4GMW8 1640 aa14.18□□□□□ -0.14
CLDND1-229ENST00000513988 KCNH8Q96L42 1107 aa14.16□□□□□ -0.14
CLDND1-229ENST00000513988 IQSEC2Q5JU85 1478 aa14.16□□□□□ -0.14
CLDND1-229ENST00000513988 MED1Q15648 1581 aaPredicted RBP14.14□□□□□ -0.15
CLDND1-229ENST00000513988 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
CLDND1-229ENST00000513988 STRCQ7RTU9 1775 aa14.11□□□□□ -0.15
CLDND1-229ENST00000513988 RAPGEF3O95398 923 aa14.11□□□□□ -0.15
CLDND1-229ENST00000513988 LTBP4Q8N2S1 1624 aa14.09□□□□□ -0.15
CLDND1-229ENST00000513988 PHLDB1Q86UU1 1377 aa14.09□□□□□ -0.15
CLDND1-229ENST00000513988 PREX1Q8TCU6 1659 aa14.08□□□□□ -0.16
CLDND1-229ENST00000513988 UBAP1LF5GYI3 381 aa14.08□□□□□ -0.16
CLDND1-229ENST00000513988 POGZQ7Z3K3 1410 aa14.07□□□□□ -0.16
CLDND1-229ENST00000513988 PTPRTO14522 1441 aa14.07□□□□□ -0.16
CLDND1-229ENST00000513988 HOXD11P31277 338 aaPredicted RBP14.06□□□□□ -0.16
CLDND1-229ENST00000513988 DISP1Q96F81 1524 aa14.05□□□□□ -0.16
CLDND1-229ENST00000513988 IQGAP2Q13576 1575 aa14.05□□□□□ -0.16
CLDND1-229ENST00000513988 DCAF8L1A6NGE4 600 aa14.04□□□□□ -0.16
CLDND1-229ENST00000513988 ARHGEF40Q8TER5 1519 aa14.04□□□□□ -0.16
CLDND1-229ENST00000513988 FANCAO15360 1455 aa14.02□□□□□ -0.16
CLDND1-229ENST00000513988 FRMPD1Q5SYB0 1578 aa14.01□□□□□ -0.17
CLDND1-229ENST00000513988 TTC37Q6PGP7 1564 aa14.01□□□□□ -0.17
CLDND1-229ENST00000513988 IGF1RP08069 1367 aa14.01□□□□□ -0.17
CLDND1-229ENST00000513988 FER1L4A9Z1Z3 1794 aa14.01□□□□□ -0.17
CLDND1-229ENST00000513988 UHRF1BP1Q6BDS2 1440 aa13.98□□□□□ -0.17
CLDND1-229ENST00000513988 MLECQ14165 292 aa13.98□□□□□ -0.17
CLDND1-229ENST00000513988 HSPA1LP34931 641 aa13.97□□□□□ -0.17
CLDND1-229ENST00000513988 RNF216Q9NWF9 866 aaPredicted RBP13.97□□□□□ -0.17
CLDND1-229ENST00000513988 NEO1Q92859 1461 aa13.97□□□□□ -0.17
CLDND1-229ENST00000513988 AKNAQ7Z591 1439 aa13.96□□□□□ -0.18
CLDND1-229ENST00000513988 KIAA0556O60303 1618 aa13.93□□□□□ -0.18
CLDND1-229ENST00000513988 CEBPAP49715 358 aaPredicted RBP13.93□□□□□ -0.18
CLDND1-229ENST00000513988 UGGT2Q9NYU1 1516 aa13.91□□□□□ -0.18
CLDND1-229ENST00000513988 ABCA9Q8IUA7 1624 aa13.91□□□□□ -0.18
CLDND1-229ENST00000513988 CARMIL1Q5VZK9 1371 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms