RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 BIVM-ERCC5R4GMW8 1640 aa16.03■□□□□ 0.16
TPM3-221ENST00000513769 SYNJ1O43426 1573 aa16.02■□□□□ 0.16
TPM3-221ENST00000513769 CUX1P39880 1505 aa15.99■□□□□ 0.15
TPM3-221ENST00000513769 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
TPM3-221ENST00000513769 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
TPM3-221ENST00000513769 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
TPM3-221ENST00000513769 FBLN2P98095 1184 aa15.97■□□□□ 0.15
TPM3-221ENST00000513769 FAM9AQ8IZU1 332 aaPredicted RBP15.97■□□□□ 0.15
TPM3-221ENST00000513769 AKT1S1Q96B36 256 aa15.97■□□□□ 0.15
TPM3-221ENST00000513769 SOGA1O94964 1423 aa15.94■□□□□ 0.14
TPM3-221ENST00000513769 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
TPM3-221ENST00000513769 WDR62O43379 1518 aa15.9■□□□□ 0.14
TPM3-221ENST00000513769 KIF27Q86VH2 1401 aa15.89■□□□□ 0.13
TPM3-221ENST00000513769 CHRDL2Q6WN34 429 aa15.89■□□□□ 0.13
TPM3-221ENST00000513769 TOPBP1Q92547 1522 aa15.89■□□□□ 0.13
TPM3-221ENST00000513769 MKRN4PQ13434 485 aaPredicted RBP15.88■□□□□ 0.13
TPM3-221ENST00000513769 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
TPM3-221ENST00000513769 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
TPM3-221ENST00000513769 REM2Q8IYK8 340 aaPredicted RBP15.83■□□□□ 0.12
TPM3-221ENST00000513769 URB2Q14146 1524 aaKnown RBP15.82■□□□□ 0.12
TPM3-221ENST00000513769 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
TPM3-221ENST00000513769 SPDYE2BA6NHP3 402 aa15.79■□□□□ 0.12
TPM3-221ENST00000513769 SPDYE6P0CI01 402 aa15.79■□□□□ 0.12
TPM3-221ENST00000513769 SPDYE2Q495Y8 402 aa15.79■□□□□ 0.12
TPM3-221ENST00000513769 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
TPM3-221ENST00000513769 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
TPM3-221ENST00000513769 IGF1RP08069 1367 aa15.77■□□□□ 0.12
TPM3-221ENST00000513769 UBTFP17480 764 aaKnown RBP15.75■□□□□ 0.11
TPM3-221ENST00000513769 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
TPM3-221ENST00000513769 PRXQ9BXM0 1461 aa15.74■□□□□ 0.11
TPM3-221ENST00000513769 KIF21BO75037 1637 aa15.73■□□□□ 0.11
TPM3-221ENST00000513769 RAD54L2Q9Y4B4 1467 aa15.7■□□□□ 0.1
TPM3-221ENST00000513769 ERICH3Q5RHP9 1530 aa15.69■□□□□ 0.1
TPM3-221ENST00000513769 CARMIL1Q5VZK9 1371 aa15.68■□□□□ 0.1
TPM3-221ENST00000513769 PITPNM1O00562 1244 aa15.68■□□□□ 0.1
TPM3-221ENST00000513769 IFT140Q96RY7 1462 aa15.66■□□□□ 0.1
TPM3-221ENST00000513769 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
TPM3-221ENST00000513769 WDR97A6NE52 1622 aa15.63■□□□□ 0.09
TPM3-221ENST00000513769 GAPVD1Q14C86 1478 aa15.63■□□□□ 0.09
TPM3-221ENST00000513769 RAPGEF2Q9Y4G8 1499 aa15.63■□□□□ 0.09
TPM3-221ENST00000513769 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
TPM3-221ENST00000513769 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
TPM3-221ENST00000513769 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
TPM3-221ENST00000513769 ZNF608Q9ULD9 1512 aaPredicted RBP15.56■□□□□ 0.08
TPM3-221ENST00000513769 RIMBP3CA6NJZ7 1639 aa15.56■□□□□ 0.08
TPM3-221ENST00000513769 RIMBP3BA6NNM3 1639 aa15.56■□□□□ 0.08
TPM3-221ENST00000513769 RIMBP3Q9UFD9 1639 aa15.56■□□□□ 0.08
TPM3-221ENST00000513769 CUL7Q14999 1698 aa15.55■□□□□ 0.08
TPM3-221ENST00000513769 ABCA5Q8WWZ7 1642 aa15.55■□□□□ 0.08
TPM3-221ENST00000513769 CEP162Q5TB80 1403 aa15.55■□□□□ 0.08
TPM3-221ENST00000513769 PIP4P2Q8N4L2 257 aa15.55■□□□□ 0.08
TPM3-221ENST00000513769 GRIN2BQ13224 1484 aa15.53■□□□□ 0.08
TPM3-221ENST00000513769 CYB5RLQ6IPT4 315 aa15.52■□□□□ 0.08
TPM3-221ENST00000513769 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.073e-10■□□□□ 8.1
TPM3-221ENST00000513769 ARHGEF11O15085 1522 aa15.5■□□□□ 0.07
TPM3-221ENST00000513769 FHAD1B1AJZ9 1412 aa15.5■□□□□ 0.07
TPM3-221ENST00000513769 CLIP1P30622 1438 aa15.49■□□□□ 0.07
TPM3-221ENST00000513769 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.075e-6■□□□□ 10.9
TPM3-221ENST00000513769 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
TPM3-221ENST00000513769 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
TPM3-221ENST00000513769 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
TPM3-221ENST00000513769 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
TPM3-221ENST00000513769 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
TPM3-221ENST00000513769 TRIM26Q12899 539 aaPredicted RBP15.38■□□□□ 0.05
TPM3-221ENST00000513769 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
TPM3-221ENST00000513769 VPS8Q8N3P4 1428 aa15.36■□□□□ 0.05
TPM3-221ENST00000513769 CHD1O14646 1710 aa15.34■□□□□ 0.05
TPM3-221ENST00000513769 SYNJ2O15056 1496 aa15.33■□□□□ 0.05
TPM3-221ENST00000513769 ARAP1Q96P48 1450 aa15.33■□□□□ 0.04
TPM3-221ENST00000513769 ARHGAP35Q9NRY4 1499 aa15.32■□□□□ 0.04
TPM3-221ENST00000513769 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
TPM3-221ENST00000513769 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
TPM3-221ENST00000513769 SNAPC4Q5SXM2 1469 aa15.31■□□□□ 0.04
TPM3-221ENST00000513769 KIAA0586Q9BVV6 1533 aa15.31■□□□□ 0.04
TPM3-221ENST00000513769 EFCAB5A4FU69 1503 aa15.3■□□□□ 0.04
TPM3-221ENST00000513769 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
TPM3-221ENST00000513769 CTTNBP2Q8WZ74 1663 aa15.28■□□□□ 0.04
TPM3-221ENST00000513769 PRKAR2AP13861 404 aaKnown RBP15.27■□□□□ 0.04
TPM3-221ENST00000513769 SPDYE4A6NLX3 237 aa15.24■□□□□ 0.03
TPM3-221ENST00000513769 FMN1Q68DA7 1419 aa15.24■□□□□ 0.03
TPM3-221ENST00000513769 HAX1O00165 279 aa15.22■□□□□ 0.03
TPM3-221ENST00000513769 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
TPM3-221ENST00000513769 JPH4Q96JJ6 628 aa15.22■□□□□ 0.03
TPM3-221ENST00000513769 NUP160Q12769 1436 aa15.22■□□□□ 0.03
TPM3-221ENST00000513769 MAP3K1Q13233 1512 aa15.22■□□□□ 0.03
TPM3-221ENST00000513769 UGGT2Q9NYU1 1516 aa15.21■□□□□ 0.03
TPM3-221ENST00000513769 IQGAP2Q13576 1575 aa15.2■□□□□ 0.02
TPM3-221ENST00000513769 PCGF6Q9BYE7 350 aa15.2■□□□□ 0.02
TPM3-221ENST00000513769 P3H3Q8IVL6 736 aa15.18■□□□□ 0.02
TPM3-221ENST00000513769 SAMD9Q5K651 1589 aa15.17■□□□□ 0.02
TPM3-221ENST00000513769 CHADLQ6NUI6 762 aa15.16■□□□□ 0.02
TPM3-221ENST00000513769 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
TPM3-221ENST00000513769 CLASP1Q7Z460 1538 aa15.16■□□□□ 0.02
TPM3-221ENST00000513769 CASKIN1Q8WXD9 1431 aa15.16■□□□□ 0.02
TPM3-221ENST00000513769 CARMIL2Q6F5E8 1435 aa15.15■□□□□ 0.02
TPM3-221ENST00000513769 FHOD3Q2V2M9 1422 aa15.11■□□□□ 0.01
TPM3-221ENST00000513769 FYCO1Q9BQS8 1478 aa15.1■□□□□ 0.01
TPM3-221ENST00000513769 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
TPM3-221ENST00000513769 CEP170Q5SW79 1584 aa15.1■□□□□ 0.01
TPM3-221ENST00000513769 DISP1Q96F81 1524 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms