RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.05
SDHC-208ENST00000513009 CYB5RLQ6IPT4 315 aa15.36■□□□□ 0.05
SDHC-208ENST00000513009 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
SDHC-208ENST00000513009 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.05
SDHC-208ENST00000513009 ARAP1Q96P48 1450 aa15.33■□□□□ 0.05
SDHC-208ENST00000513009 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
SDHC-208ENST00000513009 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
SDHC-208ENST00000513009 FBLN2P98095 1184 aa15.26■□□□□ 0.03
SDHC-208ENST00000513009 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
SDHC-208ENST00000513009 SOGA1O94964 1423 aa15.25■□□□□ 0.03
SDHC-208ENST00000513009 CLASP1Q7Z460 1538 aa15.23■□□□□ 0.03
SDHC-208ENST00000513009 TDRD9Q8NDG6 1382 aaKnown RBP15.23■□□□□ 0.03
SDHC-208ENST00000513009 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.03
SDHC-208ENST00000513009 ABCB7O75027 752 aa15.21■□□□□ 0.03
SDHC-208ENST00000513009 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
SDHC-208ENST00000513009 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
SDHC-208ENST00000513009 SYNJ1O43426 1573 aa15.19■□□□□ 0.02
SDHC-208ENST00000513009 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
SDHC-208ENST00000513009 GRIN2BQ13224 1484 aa15.16■□□□□ 0.02
SDHC-208ENST00000513009 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
SDHC-208ENST00000513009 CUX1P39880 1505 aa15.15■□□□□ 0.02
SDHC-208ENST00000513009 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
SDHC-208ENST00000513009 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
SDHC-208ENST00000513009 GAPVD1Q14C86 1478 aa15.07■□□□□ 0
SDHC-208ENST00000513009 ABCA5Q8WWZ7 1642 aa15.05■□□□□ -0
SDHC-208ENST00000513009 ABCA10Q8WWZ4 1543 aa15.04■□□□□ -0
SDHC-208ENST00000513009 POLA2Q14181 598 aa15.04■□□□□ -0
SDHC-208ENST00000513009 ATXN8OSP0DMR3 200 aa15□□□□□ -0.01
SDHC-208ENST00000513009 CSRNP3Q8WYN3 585 aa14.97□□□□□ -0.01
SDHC-208ENST00000513009 GRIN2AQ12879 1464 aa14.96□□□□□ -0.01
SDHC-208ENST00000513009 ERCC6L2Q5T890 1561 aa14.94□□□□□ -0.02
SDHC-208ENST00000513009 ADAMTS12P58397 1594 aa14.94□□□□□ -0.02
SDHC-208ENST00000513009 NUP160Q12769 1436 aa14.93□□□□□ -0.02
SDHC-208ENST00000513009 CEP170Q5SW79 1584 aa14.93□□□□□ -0.02
SDHC-208ENST00000513009 SHROOM2Q13796 1616 aa14.92□□□□□ -0.02
SDHC-208ENST00000513009 WRNQ14191 1432 aaPredicted RBP eCLIP14.91□□□□□ -0.02
SDHC-208ENST00000513009 BIVM-ERCC5R4GMW8 1640 aa14.89□□□□□ -0.03
SDHC-208ENST00000513009 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
SDHC-208ENST00000513009 FHAD1B1AJZ9 1412 aa14.87□□□□□ -0.03
SDHC-208ENST00000513009 ERICH3Q5RHP9 1530 aa14.86□□□□□ -0.03
SDHC-208ENST00000513009 KIF13AQ9H1H9 1805 aa14.84□□□□□ -0.03
SDHC-208ENST00000513009 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
SDHC-208ENST00000513009 PRG4Q92954 1404 aaPredicted RBP14.77□□□□□ -0.04
SDHC-208ENST00000513009 SUPT5HO00267 1087 aaKnown RBP14.74□□□□□ -0.05
SDHC-208ENST00000513009 JPH4Q96JJ6 628 aa14.74□□□□□ -0.05
SDHC-208ENST00000513009 RUSC2Q8N2Y8 1516 aa14.74□□□□□ -0.05
SDHC-208ENST00000513009 MAPKBP1O60336 1514 aa14.71□□□□□ -0.05
SDHC-208ENST00000513009 ABCC10Q5T3U5 1492 aa14.71□□□□□ -0.05
SDHC-208ENST00000513009 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
SDHC-208ENST00000513009 DIP2BQ9P265 1576 aa14.68□□□□□ -0.06
SDHC-208ENST00000513009 ADCY10Q96PN6 1610 aa14.66□□□□□ -0.06
SDHC-208ENST00000513009 FAM69CQ0P6D2 419 aa14.66□□□□□ -0.06
SDHC-208ENST00000513009 NPM1P06748 294 aaKnown RBP eCLIP14.65□□□□□ -0.06
SDHC-208ENST00000513009 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
SDHC-208ENST00000513009 KIAA0586Q9BVV6 1533 aa14.62□□□□□ -0.07
SDHC-208ENST00000513009 KDM6BO15054 1643 aa14.6□□□□□ -0.07
SDHC-208ENST00000513009 CUL7Q14999 1698 aa14.6□□□□□ -0.07
SDHC-208ENST00000513009 IGF1RP08069 1367 aa14.57□□□□□ -0.08
SDHC-208ENST00000513009 TSPOAP1O95153 1857 aa14.56□□□□□ -0.08
SDHC-208ENST00000513009 KIF27Q86VH2 1401 aa14.56□□□□□ -0.08
SDHC-208ENST00000513009 KDM4FA0A1W2PPD8 638 aa14.53□□□□□ -0.08
SDHC-208ENST00000513009 PTPRGP23470 1445 aa14.51□□□□□ -0.09
SDHC-208ENST00000513009 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
SDHC-208ENST00000513009 ABCC2Q92887 1545 aa14.49□□□□□ -0.09
SDHC-208ENST00000513009 GLI2P10070 1586 aa14.48□□□□□ -0.09
SDHC-208ENST00000513009 CARMIL2Q6F5E8 1435 aa14.48□□□□□ -0.09
SDHC-208ENST00000513009 TNIKQ9UKE5 1360 aa14.47□□□□□ -0.09
SDHC-208ENST00000513009 PPRC1Q5VV67 1664 aaKnown RBP14.47□□□□□ -0.09
SDHC-208ENST00000513009 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
SDHC-208ENST00000513009 PLB1Q6P1J6 1458 aa14.46□□□□□ -0.09
SDHC-208ENST00000513009 UHRF1BP1LA0JNW5 1464 aa14.45□□□□□ -0.1
SDHC-208ENST00000513009 IQGAP2Q13576 1575 aa14.45□□□□□ -0.1
SDHC-208ENST00000513009 ASXL2Q76L83 1435 aa14.45□□□□□ -0.1
SDHC-208ENST00000513009 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
SDHC-208ENST00000513009 UACAQ9BZF9 1416 aa14.41□□□□□ -0.1
SDHC-208ENST00000513009 DISP1Q96F81 1524 aa14.4□□□□□ -0.1
SDHC-208ENST00000513009 MAP3K4Q9Y6R4 1608 aa14.39□□□□□ -0.11
SDHC-208ENST00000513009 KDM5BQ9UGL1 1544 aa14.39□□□□□ -0.11
SDHC-208ENST00000513009 TTBK1Q5TCY1 1321 aaPredicted RBP14.38□□□□□ -0.11
SDHC-208ENST00000513009 ADGRL1O94910 1474 aa14.38□□□□□ -0.11
SDHC-208ENST00000513009 EPRSP07814 1512 aaKnown RBP14.37□□□□□ -0.11
SDHC-208ENST00000513009 UGGT2Q9NYU1 1516 aa14.36□□□□□ -0.11
SDHC-208ENST00000513009 TEX14Q8IWB6 1497 aa14.36□□□□□ -0.11
SDHC-208ENST00000513009 COL17A1Q9UMD9 1497 aaPredicted RBP14.36□□□□□ -0.11
SDHC-208ENST00000513009 ZCCHC11Q5TAX3 1644 aaKnown RBP14.35□□□□□ -0.11
SDHC-208ENST00000513009 KIAA0556O60303 1618 aa14.33□□□□□ -0.12
SDHC-208ENST00000513009 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
SDHC-208ENST00000513009 SPDYE2BA6NHP3 402 aa14.31□□□□□ -0.12
SDHC-208ENST00000513009 SPDYE6P0CI01 402 aa14.31□□□□□ -0.12
SDHC-208ENST00000513009 SPDYE2Q495Y8 402 aa14.31□□□□□ -0.12
SDHC-208ENST00000513009 ILDR1Q86SU0 546 aaPredicted RBP14.31□□□□□ -0.12
SDHC-208ENST00000513009 POTEHQ6S545 545 aa14.3□□□□□ -0.12
SDHC-208ENST00000513009 REM2Q8IYK8 340 aaPredicted RBP14.29□□□□□ -0.12
SDHC-208ENST00000513009 WDR7Q9Y4E6 1490 aa14.28□□□□□ -0.12
SDHC-208ENST00000513009 HECW2Q9P2P5 1572 aa14.26□□□□□ -0.13
SDHC-208ENST00000513009 CTTNBP2Q8WZ74 1663 aa14.26□□□□□ -0.13
SDHC-208ENST00000513009 CHRDL2Q6WN34 429 aa14.25□□□□□ -0.13
SDHC-208ENST00000513009 CFAP43Q8NDM7 1665 aa14.25□□□□□ -0.13
SDHC-208ENST00000513009 MAGI3Q5TCQ9 1506 aa14.24□□□□□ -0.13
SDHC-208ENST00000513009 ABCA8O94911 1581 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms