RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 AEBP2Q6ZN18 517 aaPredicted RBP26.05■■□□□ 1.76
SDHC-208ENST00000513009 CHIC1Q5VXU3 224 aa24.97■■□□□ 1.59
SDHC-208ENST00000513009 SENP3Q9H4L4 574 aaPredicted RBP22.08■■□□□ 1.13
SDHC-208ENST00000513009 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
SDHC-208ENST00000513009 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
SDHC-208ENST00000513009 FOXD1Q16676 465 aa20.62■□□□□ 0.89
SDHC-208ENST00000513009 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
SDHC-208ENST00000513009 PPP6R1Q9UPN7 881 aa19.54■□□□□ 0.72
SDHC-208ENST00000513009 ADRA2BP18089 450 aa19.45■□□□□ 0.7
SDHC-208ENST00000513009 PIAS4Q8N2W9 510 aaPredicted RBP19.25■□□□□ 0.67
SDHC-208ENST00000513009 MSH5O43196 834 aa19.1■□□□□ 0.65
SDHC-208ENST00000513009 ABCC9O60706 1549 aa19.06■□□□□ 0.64
SDHC-208ENST00000513009 CCDC180Q9P1Z9 1646 aa18.94■□□□□ 0.62
SDHC-208ENST00000513009 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
SDHC-208ENST00000513009 RB1CC1Q8TDY2 1594 aa18.1■□□□□ 0.49
SDHC-208ENST00000513009 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
SDHC-208ENST00000513009 NACADO15069 1562 aa17.94■□□□□ 0.46
SDHC-208ENST00000513009 MAPK8IP2Q13387 824 aaPredicted RBP17.8■□□□□ 0.44
SDHC-208ENST00000513009 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
SDHC-208ENST00000513009 SCAF1Q9H7N4 1312 aaKnown RBP17.71■□□□□ 0.42
SDHC-208ENST00000513009 PABPN1Q86U42 306 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDHC-208ENST00000513009 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
SDHC-208ENST00000513009 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
SDHC-208ENST00000513009 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
SDHC-208ENST00000513009 DMRT2Q9Y5R5 561 aa17.59■□□□□ 0.41
SDHC-208ENST00000513009 BICRAQ9NZM4 1560 aa17.58■□□□□ 0.41
SDHC-208ENST00000513009 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
SDHC-208ENST00000513009 DCAF1Q9Y4B6 1507 aa17.33■□□□□ 0.37
SDHC-208ENST00000513009 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
SDHC-208ENST00000513009 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
SDHC-208ENST00000513009 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
SDHC-208ENST00000513009 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
SDHC-208ENST00000513009 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
SDHC-208ENST00000513009 EIF4G1Q04637 1599 aaKnown RBP17.16■□□□□ 0.34
SDHC-208ENST00000513009 HOXD11P31277 338 aaPredicted RBP17.08■□□□□ 0.32
SDHC-208ENST00000513009 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
SDHC-208ENST00000513009 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
SDHC-208ENST00000513009 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
SDHC-208ENST00000513009 DNAJC5Q9H3Z4 198 aa16.79■□□□□ 0.28
SDHC-208ENST00000513009 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
SDHC-208ENST00000513009 KCNA4P22459 653 aa16.74■□□□□ 0.27
SDHC-208ENST00000513009 CUX2O14529 1486 aa16.58■□□□□ 0.24
SDHC-208ENST00000513009 NCAPD3P42695 1498 aa16.55■□□□□ 0.24
SDHC-208ENST00000513009 ERCC6Q03468 1493 aa16.48■□□□□ 0.23
SDHC-208ENST00000513009 ATAD2BQ9ULI0 1458 aa16.45■□□□□ 0.22
SDHC-208ENST00000513009 HMGXB3Q12766 1538 aa16.43■□□□□ 0.22
SDHC-208ENST00000513009 SMARCA2P51531 1590 aa16.42■□□□□ 0.22
SDHC-208ENST00000513009 SMARCA4P51532 1647 aa16.39■□□□□ 0.21
SDHC-208ENST00000513009 RNF39Q9H2S5 420 aa16.38■□□□□ 0.21
SDHC-208ENST00000513009 NESP48681 1621 aa16.31■□□□□ 0.2
SDHC-208ENST00000513009 BAZ1AQ9NRL2 1556 aaPredicted RBP16.28■□□□□ 0.2
SDHC-208ENST00000513009 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.2
SDHC-208ENST00000513009 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
SDHC-208ENST00000513009 THOC2Q8NI27 1593 aaKnown RBP16.25■□□□□ 0.19
SDHC-208ENST00000513009 LAMC3Q9Y6N6 1575 aa16.22■□□□□ 0.19
SDHC-208ENST00000513009 CACNB1Q02641 598 aaPredicted RBP16.21■□□□□ 0.19
SDHC-208ENST00000513009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.18
SDHC-208ENST00000513009 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.17
SDHC-208ENST00000513009 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
SDHC-208ENST00000513009 MROH2BQ7Z745 1585 aa16.11■□□□□ 0.17
SDHC-208ENST00000513009 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
SDHC-208ENST00000513009 SLC4A2P04920 1241 aa16.02■□□□□ 0.16
SDHC-208ENST00000513009 CADPSQ9ULU8 1353 aa16.01■□□□□ 0.15
SDHC-208ENST00000513009 MRC2Q9UBG0 1479 aa15.98■□□□□ 0.15
SDHC-208ENST00000513009 WDR62O43379 1518 aa15.98■□□□□ 0.15
SDHC-208ENST00000513009 U3KPZ7 1027 aaPredicted RBP15.94■□□□□ 0.14
SDHC-208ENST00000513009 WIZO95785 1651 aa15.91■□□□□ 0.14
SDHC-208ENST00000513009 TRIM41Q8WV44 630 aa15.89■□□□□ 0.13
SDHC-208ENST00000513009 CEP164Q9UPV0 1460 aa15.87■□□□□ 0.13
SDHC-208ENST00000513009 FANCD2Q9BXW9 1451 aa15.83■□□□□ 0.12
SDHC-208ENST00000513009 SLC4A1APQ9BWU0 796 aaKnown RBP15.81■□□□□ 0.12
SDHC-208ENST00000513009 CFTRP13569 1480 aa15.8■□□□□ 0.12
SDHC-208ENST00000513009 OSCARQ8IYS5 282 aa15.74■□□□□ 0.11
SDHC-208ENST00000513009 TOP2AP11388 1531 aaKnown RBP15.72■□□□□ 0.11
SDHC-208ENST00000513009 URB2Q14146 1524 aaKnown RBP15.72■□□□□ 0.11
SDHC-208ENST00000513009 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
SDHC-208ENST00000513009 PRDM2Q13029 1718 aa15.68■□□□□ 0.1
SDHC-208ENST00000513009 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
SDHC-208ENST00000513009 RIMBP3CA6NJZ7 1639 aa15.59■□□□□ 0.09
SDHC-208ENST00000513009 RIMBP3BA6NNM3 1639 aa15.59■□□□□ 0.09
SDHC-208ENST00000513009 RIMBP3Q9UFD9 1639 aa15.59■□□□□ 0.09
SDHC-208ENST00000513009 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
SDHC-208ENST00000513009 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
SDHC-208ENST00000513009 CAPN15O75808 1086 aa15.52■□□□□ 0.08
SDHC-208ENST00000513009 TOPBP1Q92547 1522 aa15.52■□□□□ 0.07
SDHC-208ENST00000513009 ARHGEF11O15085 1522 aa15.51■□□□□ 0.07
SDHC-208ENST00000513009 CCDC88BA6NC98 1476 aa15.51■□□□□ 0.07
SDHC-208ENST00000513009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
SDHC-208ENST00000513009 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
SDHC-208ENST00000513009 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
SDHC-208ENST00000513009 MYCNP04198 464 aaPredicted RBP15.48■□□□□ 0.07
SDHC-208ENST00000513009 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
SDHC-208ENST00000513009 EIF4G3O43432 1585 aaKnown RBP15.48■□□□□ 0.07
SDHC-208ENST00000513009 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
SDHC-208ENST00000513009 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
SDHC-208ENST00000513009 DSG3P32926 999 aa15.44■□□□□ 0.06
SDHC-208ENST00000513009 ZBTB22O15209 634 aa15.43■□□□□ 0.06
SDHC-208ENST00000513009 CHD1O14646 1710 aa15.41■□□□□ 0.06
SDHC-208ENST00000513009 APLP2Q06481 763 aa15.41■□□□□ 0.06
SDHC-208ENST00000513009 TARBP1Q13395 1621 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms